| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119947200
Identifier: 119947200
GI number: 119947200
Start: 4412602
End: 4412910
Strand: Direct
Name: 119947200
Synonym: Ping_3598
Alternate gene names: NA
Gene position: 4412602-4412910 (Clockwise)
Preceding gene: 119947199
Following gene: 119947201
Centisome position: 96.78
GC content: 39.81
Gene sequence:
>309_bases ATGGATATTGGCGATATGAAAATAAATAAAGTGGCAACCGCAAATTTAAGCGCAATTTCAGAAGAAAATAAGAATAAAGT GACACCTAAAAAACTGTCACCGTCAGCACCGTTTAATGATGTTCGCGTAGGTGATACCGCAACGATAGCGACTGCGACAA AAACCATCAATGAAATACCCGATATTGATAGGGAGAAAGTAAAACAAGTACAGCTCGCGATCGCTAACGGCGAGTTGAAA ATAGATTTGAACAGCCTTGCCCGGGCTATTATGAATGAACACCTGTTGGATAATACAAGCAATGACTAA
Upstream 100 bases:
>100_bases AGACAGACTAATTTGCTTAAATTATAAAAAAAACGCTATATTGCTACATAAAAAAAAATGAAATGAAAAATTTCTTCGTT TATATAAAAAGAAGGTAAAC
Downstream 100 bases:
>100_bases AAAAGAAATGCTGACAATTTTTCACCGTACTATTGTCAGTGATTTTCAGGTTGCCTGCGCATTAACTGATTTGCTCGAAT CAGTCAGAGACAGCTGTCTT
Product: anti-sigma-28 factor, FlgM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDIGDMKINKVATANLSAISEENKNKVTPKKLSPSAPFNDVRVGDTATIATATKTINEIPDIDREKVKQVQLAIANGELK IDLNSLARAIMNEHLLDNTSND
Sequences:
>Translated_102_residues MDIGDMKINKVATANLSAISEENKNKVTPKKLSPSAPFNDVRVGDTATIATATKTINEIPDIDREKVKQVQLAIANGELK IDLNSLARAIMNEHLLDNTSND >Mature_102_residues MDIGDMKINKVATANLSAISEENKNKVTPKKLSPSAPFNDVRVGDTATIATATKTINEIPDIDREKVKQVQLAIANGELK IDLNSLARAIMNEHLLDNTSND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11073; Mature: 11073
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGDMKINKVATANLSAISEENKNKVTPKKLSPSAPFNDVRVGDTATIATATKTINEIP CCCCCCEECCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEHHHHHHHHHHCC DIDREKVKQVQLAIANGELKIDLNSLARAIMNEHLLDNTSND CCCHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDIGDMKINKVATANLSAISEENKNKVTPKKLSPSAPFNDVRVGDTATIATATKTINEIP CCCCCCEECCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEHHHHHHHHHHCC DIDREKVKQVQLAIANGELKIDLNSLARAIMNEHLLDNTSND CCCHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA