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The map label for this gene is fliP [H]

Identifier: 119947195

GI number: 119947195

Start: 4407499

End: 4408236

Strand: Direct

Name: fliP [H]

Synonym: Ping_3593

Alternate gene names: 119947195

Gene position: 4407499-4408236 (Clockwise)

Preceding gene: 119947194

Following gene: 119947196

Centisome position: 96.66

GC content: 43.5

Gene sequence:

>738_bases
ATGCGCGCTTTGTTAAATGTACTGGTGGTGCTCGCACTGTTATCACCCTTCAATTCTTTCGCCAGTGAAGGATTATCGGT
TTTATCGATAACCGATACCCCAACCGGGCAGGACTATAGCGTCAAGCTGCAAATCCTTATTTTAATGACTGCGCTCAGTT
TTATTCCTGCTTTTATTTTAATGTGTACCTGTTTTACCCGCATCATTATTGTCCTGGCCATTCTCCGCCAGGCACTCGGA
TTACAGCAATCCCCCCCTAACCAAGTGTTATTAGGAATAGCATTAGCCTTGTCTATTTTAATTATGAAACCGGTTTGGAC
TGATGTATATGATAATGCTTTTGTGCCCTATGATGCCGGGGACATAAGCCTGTTAACGGCTGCCAGTATTGCTGAGAAAC
CGGTAAGGGAGTTTATGCTTAGGCAAACGCACAGCAGTTCATTGGAGCAGATGATGAATATTGCCGGTGAAGATGAGAAC
GTTAAACCTGAAGATATTTCGTTTGCCATTATTTTGCCGGCCTTTGTGATAAGTGAACTGAAAACGGCTTTCCAAATAGG
TTTTATGTTGTTTATGCCTTTTCTGATCATTGATTTGGTGGTCGCCAGCGTATTGATGTCAATGGGTATGATGATGCTGT
CTCCTTTAATTGTATCTCTGCCCTTTAAGTTACTCGCCTTTGTGCTGGTTGATGGCTGGACCATGCTGGTCGGCAGCTTA
AGTACGTCATTCGGATGA

Upstream 100 bases:

>100_bases
AGTAAATGGTAAGTTATTTGCTTACGGTGAAGTGGTGGTTGCCAACGGACATTACGGTGTGAAAATCACTGATATTGTCA
ATAAAGATATTGACTGATTG

Downstream 100 bases:

>100_bases
ACCTATGAGTCCGGAATTTGTTGTCTCCCTTCTTTCGCAAAGTATTTGGCTAATCATTAAGTTTGTTGCCGTACTGGTAT
TACCAAGTTTAGTAGTCGGG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRALLNVLVVLALLSPFNSFASEGLSVLSITDTPTGQDYSVKLQILILMTALSFIPAFILMCTCFTRIIIVLAILRQALG
LQQSPPNQVLLGIALALSILIMKPVWTDVYDNAFVPYDAGDISLLTAASIAEKPVREFMLRQTHSSSLEQMMNIAGEDEN
VKPEDISFAIILPAFVISELKTAFQIGFMLFMPFLIIDLVVASVLMSMGMMMLSPLIVSLPFKLLAFVLVDGWTMLVGSL
STSFG

Sequences:

>Translated_245_residues
MRALLNVLVVLALLSPFNSFASEGLSVLSITDTPTGQDYSVKLQILILMTALSFIPAFILMCTCFTRIIIVLAILRQALG
LQQSPPNQVLLGIALALSILIMKPVWTDVYDNAFVPYDAGDISLLTAASIAEKPVREFMLRQTHSSSLEQMMNIAGEDEN
VKPEDISFAIILPAFVISELKTAFQIGFMLFMPFLIIDLVVASVLMSMGMMMLSPLIVSLPFKLLAFVLVDGWTMLVGSL
STSFG
>Mature_245_residues
MRALLNVLVVLALLSPFNSFASEGLSVLSITDTPTGQDYSVKLQILILMTALSFIPAFILMCTCFTRIIIVLAILRQALG
LQQSPPNQVLLGIALALSILIMKPVWTDVYDNAFVPYDAGDISLLTAASIAEKPVREFMLRQTHSSSLEQMMNIAGEDEN
VKPEDISFAIILPAFVISELKTAFQIGFMLFMPFLIIDLVVASVLMSMGMMMLSPLIVSLPFKLLAFVLVDGWTMLVGSL
STSFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=248, Percent_Identity=51.6129032258064, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26758; Mature: 26758

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS01060 FLIP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLNVLVVLALLSPFNSFASEGLSVLSITDTPTGQDYSVKLQILILMTALSFIPAFIL
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MCTCFTRIIIVLAILRQALGLQQSPPNQVLLGIALALSILIMKPVWTDVYDNAFVPYDAG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DISLLTAASIAEKPVREFMLRQTHSSSLEQMMNIAGEDENVKPEDISFAIILPAFVISEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
KTAFQIGFMLFMPFLIIDLVVASVLMSMGMMMLSPLIVSLPFKLLAFVLVDGWTMLVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STSFG
HHCCC
>Mature Secondary Structure
MRALLNVLVVLALLSPFNSFASEGLSVLSITDTPTGQDYSVKLQILILMTALSFIPAFIL
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MCTCFTRIIIVLAILRQALGLQQSPPNQVLLGIALALSILIMKPVWTDVYDNAFVPYDAG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DISLLTAASIAEKPVREFMLRQTHSSSLEQMMNIAGEDENVKPEDISFAIILPAFVISEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
KTAFQIGFMLFMPFLIIDLVVASVLMSMGMMMLSPLIVSLPFKLLAFVLVDGWTMLVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STSFG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]