| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947193
Identifier: 119947193
GI number: 119947193
Start: 4406336
End: 4407136
Strand: Direct
Name: 119947193
Synonym: Ping_3591
Alternate gene names: NA
Gene position: 4406336-4407136 (Clockwise)
Preceding gene: 119947192
Following gene: 119947194
Centisome position: 96.64
GC content: 40.95
Gene sequence:
>801_bases ATGGGACAATTGTTCAAAGAATACCAAATAGTAGCCACTGAAAGTCTGGGTTTAGCACATCGCAGATTGCTTCCCACTGT TGCTAAATTAGCCAGGAAAATGCAGGTTAATTTAAACAACACCTTAAGCACCCTGTTTAATACTGCCATTGAGACCGAAA TTGAAGCCTTAGTGCAGCAGTTGGTTGGCGAGCAACCGGGTACTGTTTACACTTCAGTTGATATCAGCACCACGAGCACA TTAACACTGGCCATCTGCGAGGACGCGCTGAACCAACTGACAGATCTTTATTTTAATGAACCAGCCGGTGCCAGTAATGG GGTTAATAATACCGCATTACGTTTATTTGACCGGCTGGCAAAGCATGTCGCTGAGCAGTCTCAGCTGCTGCACAGTGATA AGAAAAGTAAAATAGTTGCTACCAAAAAATTAGCGCCTCAGTCGATTGTGCTTCAATTTACCTTAATCACGACAGATCAG AAGATTCCTTTTAAGGTCATTTTAAATCAGAATATTGAACAAACCTTAGTAAAAAGTTACCTCCCCCATCCTTTAATCGA TAAAGCATCCATTGAAAAATCATTACTGAGTGTAGAGGTTGAGGGTTATGTCACCATGATGAGCCGCACCCTTAAATTAG GCGATATTTCATCTTTAAATATCGGCGATGTTATTTCGATGGAGATGCATGACCACGCTTTTTTTTCAATTGGCGATACC ACTGTTTTTAGGGGAAAAATTTCCACTCAAAATGAGCGCTTACTCTTTACCGTCAATGATCAACAAGAGAATGACCAATG A
Upstream 100 bases:
>100_bases GCAGAAAGAGATCAATCCAGATTAGCCGATCTTATTTCTATTACCCGTAAAAAATCAATTTTCACTTAGAAAATAATAAC CTCCTCATCAGGTATATTGC
Downstream 100 bases:
>100_bases ACCCCTTAGATAATGATTTAGATAATGAATTTGATTTAGATGATATGGATTTTGATCTGATTAATGATGTTAATGATATT AGTGATGCGCCCCCCTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MGQLFKEYQIVATESLGLAHRRLLPTVAKLARKMQVNLNNTLSTLFNTAIETEIEALVQQLVGEQPGTVYTSVDISTTST LTLAICEDALNQLTDLYFNEPAGASNGVNNTALRLFDRLAKHVAEQSQLLHSDKKSKIVATKKLAPQSIVLQFTLITTDQ KIPFKVILNQNIEQTLVKSYLPHPLIDKASIEKSLLSVEVEGYVTMMSRTLKLGDISSLNIGDVISMEMHDHAFFSIGDT TVFRGKISTQNERLLFTVNDQQENDQ
Sequences:
>Translated_266_residues MGQLFKEYQIVATESLGLAHRRLLPTVAKLARKMQVNLNNTLSTLFNTAIETEIEALVQQLVGEQPGTVYTSVDISTTST LTLAICEDALNQLTDLYFNEPAGASNGVNNTALRLFDRLAKHVAEQSQLLHSDKKSKIVATKKLAPQSIVLQFTLITTDQ KIPFKVILNQNIEQTLVKSYLPHPLIDKASIEKSLLSVEVEGYVTMMSRTLKLGDISSLNIGDVISMEMHDHAFFSIGDT TVFRGKISTQNERLLFTVNDQQENDQ >Mature_265_residues GQLFKEYQIVATESLGLAHRRLLPTVAKLARKMQVNLNNTLSTLFNTAIETEIEALVQQLVGEQPGTVYTSVDISTTSTL TLAICEDALNQLTDLYFNEPAGASNGVNNTALRLFDRLAKHVAEQSQLLHSDKKSKIVATKKLAPQSIVLQFTLITTDQK IPFKVILNQNIEQTLVKSYLPHPLIDKASIEKSLLSVEVEGYVTMMSRTLKLGDISSLNIGDVISMEMHDHAFFSIGDTT VFRGKISTQNERLLFTVNDQQENDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29565; Mature: 29434
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQLFKEYQIVATESLGLAHRRLLPTVAKLARKMQVNLNNTLSTLFNTAIETEIEALVQQ CCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LVGEQPGTVYTSVDISTTSTLTLAICEDALNQLTDLYFNEPAGASNGVNNTALRLFDRLA HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH KHVAEQSQLLHSDKKSKIVATKKLAPQSIVLQFTLITTDQKIPFKVILNQNIEQTLVKSY HHHHHHHHHHHCCCCCCEEEHHHCCCCEEEEEEEEEECCCCCCEEEEECCCHHHHHHHHH LPHPLIDKASIEKSLLSVEVEGYVTMMSRTLKLGDISSLNIGDVISMEMHDHAFFSIGDT CCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCC TVFRGKISTQNERLLFTVNDQQENDQ EEEEEEECCCCCEEEEEECCCCCCCC >Mature Secondary Structure GQLFKEYQIVATESLGLAHRRLLPTVAKLARKMQVNLNNTLSTLFNTAIETEIEALVQQ CCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LVGEQPGTVYTSVDISTTSTLTLAICEDALNQLTDLYFNEPAGASNGVNNTALRLFDRLA HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH KHVAEQSQLLHSDKKSKIVATKKLAPQSIVLQFTLITTDQKIPFKVILNQNIEQTLVKSY HHHHHHHHHHHCCCCCCEEEHHHCCCCEEEEEEEEEECCCCCCEEEEECCCHHHHHHHHH LPHPLIDKASIEKSLLSVEVEGYVTMMSRTLKLGDISSLNIGDVISMEMHDHAFFSIGDT CCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCC TVFRGKISTQNERLLFTVNDQQENDQ EEEEEEECCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA