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The map label for this gene is lafA [H]

Identifier: 119947191

GI number: 119947191

Start: 4404503

End: 4405528

Strand: Reverse

Name: lafA [H]

Synonym: Ping_3589

Alternate gene names: 119947191

Gene position: 4405528-4404503 (Counterclockwise)

Preceding gene: 119947208

Following gene: 119947190

Centisome position: 96.62

GC content: 48.05

Gene sequence:

>1026_bases
ATGTCTTTATCAATTCAAACTAACTATGCCAACTTGGTTGGTCAAAATACTCTTAACAAAACCAATGCGGATTTTAATAC
CTCATTAGAGCGTTTATCTACAGGTTATCGTATTAACTCAGCGTCCGATGATGCAGCGGGTCTGCAGATATCCAACCGTT
TAGAAGCCCAAGGTCGTGGGATGGGCGTGGCAATGCGTAATGCCGGTGATGCCACTTCGCAAATGCAGACGGCGGAAGGC
GCGATGGAAGAAATGACCAATATTGCTTACCGTATGAGCGATCTGGCAACACAATCTGCCAATGGTACCGCCTCTGATGA
TGATCGAACGGCGATGGAAGCTGAGTTCACATCCTTAGCAGCCGAACTTGGCAGTTTGATGGAAAATACCAATATGGGCG
GCCAAAAACTGCTTGATAAAACCGACGGCGTTTTTGCGACGGGAGCTATTAATTATCAGGTGGGCAATACCTCAGCAGAA
AAATTATCCGTGGATATTTCAACCGAGCTGACAACGGTAACGACATCGATTACAGCATTATCCGAGGGCGCTGCTTTTGC
TGCCGCTTACAATACTGCCTACCAAACAGCTTATGATACAGAAATGGCTGGAGCTGGTGTTGTTGCCACTGCAAAGGCAA
ATGGTGTAGCTGCGGGTAATACTGCTGGTGCAGCCGATGCAGACGCTGGTGCTTATGCCACTATGGCGGCGGTGGAAACT
AAAGGTTTAACATTAACGTCTCAAAAGGGCGCAACGAATGCAATCGATACACTCTCCGGGTTTATCAATGACATAGGAGC
CACCCGTTCTCAACTGGGTGCAAATATTAACCGCCTGGATCATACGATGGCGAATCTGGCGAGCATGTCGGAAAATACCG
CGGCGGCAAAGTCCCGTATTATGGATACCGATATGGCGGCGGAATCATCGGCGATGAGCAAAAACCAAATGTTAATGCAG
GCCGGTGCGCAGGTGCTTTCATCGACTAAAATGGTGCCGCAGTTAGCCATGTCATTAATGGGTTAA

Upstream 100 bases:

>100_bases
ATGCGATTTTTTATTAATAAACTGAATTAAACCTTTTTTTTTACTCGTAACTACTGTTAGTTCGAAATAATATTTTATTG
CAAATAAAAGGAGTTCAAGA

Downstream 100 bases:

>100_bases
TCAACGGCCGGTTAAAAAACTGCGCCTTAACCAGTGCCCTGTTTTTTTGCTGTTTCTCGGTATATTAATTCGCATATTAG
TAAAAAAGTGCGAATTTATA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSLSIQTNYANLVGQNTLNKTNADFNTSLERLSTGYRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEG
AMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFTSLAAELGSLMENTNMGGQKLLDKTDGVFATGAINYQVGNTSAE
KLSVDISTELTTVTTSITALSEGAAFAAAYNTAYQTAYDTEMAGAGVVATAKANGVAAGNTAGAADADAGAYATMAAVET
KGLTLTSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQMLMQ
AGAQVLSSTKMVPQLAMSLMG

Sequences:

>Translated_341_residues
MSLSIQTNYANLVGQNTLNKTNADFNTSLERLSTGYRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEG
AMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFTSLAAELGSLMENTNMGGQKLLDKTDGVFATGAINYQVGNTSAE
KLSVDISTELTTVTTSITALSEGAAFAAAYNTAYQTAYDTEMAGAGVVATAKANGVAAGNTAGAADADAGAYATMAAVET
KGLTLTSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQMLMQ
AGAQVLSSTKMVPQLAMSLMG
>Mature_340_residues
SLSIQTNYANLVGQNTLNKTNADFNTSLERLSTGYRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEGA
MEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFTSLAAELGSLMENTNMGGQKLLDKTDGVFATGAINYQVGNTSAEK
LSVDISTELTTVTTSITALSEGAAFAAAYNTAYQTAYDTEMAGAGVVATAKANGVAAGNTAGAADADAGAYATMAAVETK
GLTLTSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQMLMQA
GAQVLSSTKMVPQLAMSLMG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=166, Percent_Identity=36.7469879518072, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 35113; Mature: 34982

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSIQTNYANLVGQNTLNKTNADFNTSLERLSTGYRINSASDDAAGLQISNRLEAQGRG
CCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCEEHHHHHHCCCC
MGVAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFTSLA
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AELGSLMENTNMGGQKLLDKTDGVFATGAINYQVGNTSAEKLSVDISTELTTVTTSITAL
HHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEECCCCHHHEEEEECCCEEEHHHHHHHH
SEGAAFAAAYNTAYQTAYDTEMAGAGVVATAKANGVAAGNTAGAADADAGAYATMAAVET
HCCCHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
KGLTLTSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRI
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
MDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSIQTNYANLVGQNTLNKTNADFNTSLERLSTGYRINSASDDAAGLQISNRLEAQGRG
CEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCEEHHHHHHCCCC
MGVAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFTSLA
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AELGSLMENTNMGGQKLLDKTDGVFATGAINYQVGNTSAEKLSVDISTELTTVTTSITAL
HHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEECCCCHHHEEEEECCCEEEHHHHHHHH
SEGAAFAAAYNTAYQTAYDTEMAGAGVVATAKANGVAAGNTAGAADADAGAYATMAAVET
HCCCHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
KGLTLTSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRI
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
MDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]