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The map label for this gene is lafA [H]

Identifier: 119947190

GI number: 119947190

Start: 4403137

End: 4404315

Strand: Reverse

Name: lafA [H]

Synonym: Ping_3588

Alternate gene names: 119947190

Gene position: 4404315-4403137 (Counterclockwise)

Preceding gene: 119947191

Following gene: 119947189

Centisome position: 96.59

GC content: 48.26

Gene sequence:

>1179_bases
ATGGCATTATCAATTCAAACCAACTATGCCAACCTGGTTGGTCAAAATACCCTCAATAAAACCAACGCGGATTTTAATAC
CTCATTAGAGCGTTTATCCACAGGTTTCCGTATTAACTCAGCGTCCGATGATGCGGCGGGTCTGCAGATATCTAACCGTT
TAGAAGCGCAAGGTCGTGGTATGGGCGTGGCAATGCGTAATGCCGGTGATGCGACGTCACAAATGCAGACAGCAGAAGGC
GCGATGGAAGAAATGACCAATATCGCATACCGTATGAGCGATCTGGCAACACAATCTGCCAATGGTACAGCCTCCGATGA
TGATCGTACTGCAATGGAAGCGGAGTTCCAATCACTCGCCTCTGAGCTTGGCAGTCTGATGGAAAACACCAATATGGGCG
GCCAAAAACTGCTTGATAAAACCGATGGCGTTTTTGCAGCCGGTGCAATCAGTTATCAGGTGGGTAATACCTCGGCGGAA
AAACTATCCGTGAATATTACAGCTGAGCTCGGAAAGGTGGCCTCTTTAGTTGGCGATCTTGCTGGTGCTGCGACTTTTAC
CGAAGCTTATGATACAAAATATGCTGAAATAAATACTGCAGCATATAGTGCCGCCGTGACAACTGCAAAAGGCGCTAATA
ATGCGACTGTAAGCGGTTCTAGTGGTTATTACAGCGCTTATTACAGCGCTGAGTCTATTACTGGTGCTGCAACCGCCCAG
CAACAAGCTGATGCGGAAGCATATGCTGTAACGACTGCCGATGCATCACGCTCAGCCGAAGCTGTTACTGCGGGTGATAC
AGCGGGTGATACAGCGGCTAATTTAGGCACTAGTTTGGATACTATGATTGAGGTGGCTGCAAATCAGGAAGCCAGTGGTT
TAACATTAACGTCACAAACCGGGGCAACGAATGCAATCGATACCCTTTCCGGGTTTATTACCGATATCGGTGCCACCCGC
TCTCAACTGGGCGCAAATATTAACCGCTTAGATCATACTATGGCCAATCTGGCGAGCATGTCAGAAAATACCGCGGCGGC
AAAGTCCCGTATTATGGATACCGATATGGCGGCGGAGTCATCTGCGATGAGCAAAAACCAAATGTTAATGCAGGCCGGTG
CGCAGGTGCTTTCATCAACTAAAATGGTGCCGCAGTTAGCCATGTCATTAATGGGTTAA

Upstream 100 bases:

>100_bases
GTGCGAATTTATATTAATAAACTGAATTAAAATTGTTTTTTTAGCCGTAGCTACTGTCAGGTCAAAACAATATTTTATTG
TAAATAAAAGGGATTAAACA

Downstream 100 bases:

>100_bases
TCAACCGCGGGTAAAAAAACGCACTTTAACCAGTGCGTTTTTTTATTTTAAATTGAGATTAAAGGCCTTTTTTACTCGTA
TTTTATAGCGTTCGCTTTAA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEG
AMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAE
KLSVNITAELGKVASLVGDLAGAATFTEAYDTKYAEINTAAYSAAVTTAKGANNATVSGSSGYYSAYYSAESITGAATAQ
QQADAEAYAVTTADASRSAEAVTAGDTAGDTAANLGTSLDTMIEVAANQEASGLTLTSQTGATNAIDTLSGFITDIGATR
SQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG

Sequences:

>Translated_392_residues
MALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEG
AMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAE
KLSVNITAELGKVASLVGDLAGAATFTEAYDTKYAEINTAAYSAAVTTAKGANNATVSGSSGYYSAYYSAESITGAATAQ
QQADAEAYAVTTADASRSAEAVTAGDTAGDTAANLGTSLDTMIEVAANQEASGLTLTSQTGATNAIDTLSGFITDIGATR
SQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
>Mature_391_residues
ALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEGA
MEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAEK
LSVNITAELGKVASLVGDLAGAATFTEAYDTKYAEINTAAYSAAVTTAKGANNATVSGSSGYYSAYYSAESITGAATAQQ
QADAEAYAVTTADASRSAEAVTAGDTAGDTAANLGTSLDTMIEVAANQEASGLTLTSQTGATNAIDTLSGFITDIGATRS
QLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=166, Percent_Identity=36.7469879518072, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40256; Mature: 40124

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRG
CEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHCCCC
MGVAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLA
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAEKLSVNITAELGKVASLVGDL
HHHHHHHHCCCCCHHHHHHCCCCEEEECEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHH
AGAATFTEAYDTKYAEINTAAYSAAVTTAKGANNATVSGSSGYYSAYYSAESITGAATAQ
HHHHHHHHHHCCHHHEECHHHHHHHHEECCCCCCCEECCCCCCEEEEECCCCCCCHHHHH
QQADAEAYAVTTADASRSAEAVTAGDTAGDTAANLGTSLDTMIEVAANQEASGLTLTSQT
HHCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEECCC
GATNAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAES
CCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRG
EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHCCCC
MGVAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLA
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAEKLSVNITAELGKVASLVGDL
HHHHHHHHCCCCCHHHHHHCCCCEEEECEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHH
AGAATFTEAYDTKYAEINTAAYSAAVTTAKGANNATVSGSSGYYSAYYSAESITGAATAQ
HHHHHHHHHHCCHHHEECHHHHHHHHEECCCCCCCEECCCCCCEEEEECCCCCCCHHHHH
QQADAEAYAVTTADASRSAEAVTAGDTAGDTAANLGTSLDTMIEVAANQEASGLTLTSQT
HHCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEECCC
GATNAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAES
CCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]