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The map label for this gene is lafA [H]

Identifier: 119947189

GI number: 119947189

Start: 4401759

End: 4402796

Strand: Reverse

Name: lafA [H]

Synonym: Ping_3587

Alternate gene names: 119947189

Gene position: 4402796-4401759 (Counterclockwise)

Preceding gene: 119947190

Following gene: 119947188

Centisome position: 96.56

GC content: 49.42

Gene sequence:

>1038_bases
ATGGCATTATCAATTCAAACCAACTATGCCAACCTGGTTGGTCAAAATACCCTCAATAAAACCAACGCGGATTTTAATAC
CTCATTAGAGCGTTTATCCACAGGTTTCCGTATTAACTCAGCATCCGATGATGCGGCGGGTCTGCAGATATCCAACCGTT
TAGAAGCCCAAGGTCGCGGGATGGGCGTGGCAATGCGTAATGCCGGTGATGCGACGTCACAAATGCAGACTGCGGAAGGC
GCAATGGAAGAAATGACCAATATCGCATACCGTATGAGCGATCTAGCAACACAATCTGCCAATGGTACCGCCTCCGATGA
TGATCGTACGGCGATGGAAGCGGAGTTCCAATCACTCGCCTCTGAGCTTGGCAGTCTGATGGAAAACACCAATATGGGCG
GTCAAAAACTGCTTGATAAAACCGACGGTGTGTTTGCAGCCGGTGCAATCAGTTATCAGGTGGGCAACACCTCGGCGGAA
ACACTCTCTGTGGATATTACAGCAGAGCTGGGAGAGGTGGTGACAGCCGTTGGAAAGCTTGCAGGCAGCGCCGCATATAT
TAAAGCTTATGATGCTGATATTGCAACTGCCGCAAGTGCTGGCTCTCCAACCGCTGGTGAAATTGCAGCTGCAGCAGCAC
TTGGCTTAGCTGCTGCTGAAGCTGCTGGCGCTGACGCAACAGTACTCGCTGGATTTACTGATAGGGCGACCGTTGAAACA
AAACAGGAAGCAGGTGGTTTTACACTAAGCTCACAAGATACGGCAACTAAGGCAATAGATACACTCTCCGGATTTATCAC
CGATATAGGTGCTACCCGCTCTCAACTGGGCGCCAATATTAACCGCTTAGATCATACTATGGCCAATCTGGCAAGCATGT
CTGAAAATACCGCGGCAGCAAAATCCCGTATTATGGATACCGATATGGCGGCTGAGTCATCTGCGATGAGCAAAAACCAA
ATGTTAATGCAGGCCGGTGCGCAGGTGCTTTCATCAACTAAAATGGTGCCGCAGTTAGCCATGTCATTAATGGGTTAA

Upstream 100 bases:

>100_bases
GTGCGAATTAAGATCAATAAACTGAATCAAAATTGTTTTTTGAGCCGTAACTACTGTCAGGTCGAAACAATATTTTATTG
TAAATAAAAGGAATAAAACA

Downstream 100 bases:

>100_bases
TCATAACGATAACAAAAAACCACTCGCGGCGGAGAGTGGTTTTTTGTCTTAACTTATCAATAGGTGGATTAATAGCGAGC
TATGACCCTGAATAGGGTTA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEG
AMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAE
TLSVDITAELGEVVTAVGKLAGSAAYIKAYDADIATAASAGSPTAGEIAAAAALGLAAAEAAGADATVLAGFTDRATVET
KQEAGGFTLSSQDTATKAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQ
MLMQAGAQVLSSTKMVPQLAMSLMG

Sequences:

>Translated_345_residues
MALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEG
AMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAE
TLSVDITAELGEVVTAVGKLAGSAAYIKAYDADIATAASAGSPTAGEIAAAAALGLAAAEAAGADATVLAGFTDRATVET
KQEAGGFTLSSQDTATKAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQ
MLMQAGAQVLSSTKMVPQLAMSLMG
>Mature_344_residues
ALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMGVAMRNAGDATSQMQTAEGA
MEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAET
LSVDITAELGEVVTAVGKLAGSAAYIKAYDADIATAASAGSPTAGEIAAAAALGLAAAEAAGADATVLAGFTDRATVETK
QEAGGFTLSSQDTATKAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSAMSKNQM
LMQAGAQVLSSTKMVPQLAMSLMG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=166, Percent_Identity=37.9518072289157, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 35304; Mature: 35172

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRG
CEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCC
MGVAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLA
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAETLSVDITAELGEVVTAVGKL
HHHHHHHHHCCCCHHHHHHHCCCEEEECEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHH
AGSAAYIKAYDADIATAASAGSPTAGEIAAAAALGLAAAEAAGADATVLAGFTDRATVET
CCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
KQEAGGFTLSSQDTATKAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAA
HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
KSRIMDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRG
EEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCC
MGVAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLA
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SELGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAETLSVDITAELGEVVTAVGKL
HHHHHHHHHCCCCHHHHHHHCCCEEEECEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHH
AGSAAYIKAYDADIATAASAGSPTAGEIAAAAALGLAAAEAAGADATVLAGFTDRATVET
CCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
KQEAGGFTLSSQDTATKAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAA
HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
KSRIMDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]