| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947159
Identifier: 119947159
GI number: 119947159
Start: 4375190
End: 4376212
Strand: Direct
Name: 119947159
Synonym: Ping_3557
Alternate gene names: NA
Gene position: 4375190-4376212 (Clockwise)
Preceding gene: 119947157
Following gene: 119947192
Centisome position: 95.96
GC content: 43.01
Gene sequence:
>1023_bases ATGCGTAAATTGTTACCGGTTGTCATATCAAGTATTTTGTTAAGCAATTTTCTGGCCGCTGAGGTCGCCGCAAATTCAGC ACCAGCGGTACAACCACTTGCTGAGAAAGCGGGCTGGGAGTTCACTCTGGGCATCAATTTAGGTTACAGCGCTGGTCGCT CACAATTAAATACCAATAATGATAACGCAGTCAATGAGAATCTTAACAATAACGGTCAGGCTATCAGTAAGCCATTTATA TTTCCCACAGCCCGCGCACAGTATACTTTTACAGAATTAAAAACGCAGATATTTGCAGGGGACAGCCGCGAAAAAATTTC GACAGCCAAGTTTCAATATGAACTGGGGATCACCCACTTATTTAATAACAGCAGCGAAATGACGGTCGCTTATTTTCCGC AAATGCTATCTTTCAATGATGCCTGGCAGGATCCCTATTTAACCGGCAGTACACGAACAACAACGGACGAAAATGCGCAG GGCGGGCGATTTGCTTTAACCCGCATTGCAGGCAGTACAATTACCCTTAAATATGCCTTTGCCTTTACAGCGATAGAAAA TGAACACAGCGGACAAAGTTTAGGATTGAATGCTAAGCAGTTGACCATGCTACAGCGTGACAGCTTGTATCAGCGCGCTG AAATAGAAACCATGTATTCGATCGCACCCGGCATATTTTTCAAACCCGCACTGCAATACACAACAAGGTCTGCCGATGGT GAAGCACATAACTTTGATCAATATGGACTGCAGTTAAGCCTTCTGGTTTTTAAAGGCAGACACAGCTTAATTACTACCCT CAATACCGGCATTAAAAAGTTTGCCGTTGAAAATCCGGCTTTTAATGAAAAACAGAATACCGTGAATGCAGGACTCTTTT CTGTTTATAGCTATGACCAGGCGCTTAACTGGCAACCATTAAGTTTTAATCTACTGGCCGGTTACACAAAAGAAGACTCT GATATCAATTTTTACGATAGCGAAGGTTTCTTTACGTCGACCGGCATCACCTATCAGTTTTAA
Upstream 100 bases:
>100_bases GAATCCGCAATGATATGATCTGCACCACTTCAGGCTTCGTATCACTCTTTTAATATTGGCGGTTTTCCGTCTTAGGTTAT CTCATTCAAGGAAGAAAATA
Downstream 100 bases:
>100_bases TCTACTGGCCGGTTACACAAAAGAAGACTCTGATATCAATTTTTACGATAGCGAAGGTTTCTTTACGTCGACCGGCATCA CCTATCAGTTTTAATCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRKLLPVVISSILLSNFLAAEVAANSAPAVQPLAEKAGWEFTLGINLGYSAGRSQLNTNNDNAVNENLNNNGQAISKPFI FPTARAQYTFTELKTQIFAGDSREKISTAKFQYELGITHLFNNSSEMTVAYFPQMLSFNDAWQDPYLTGSTRTTTDENAQ GGRFALTRIAGSTITLKYAFAFTAIENEHSGQSLGLNAKQLTMLQRDSLYQRAEIETMYSIAPGIFFKPALQYTTRSADG EAHNFDQYGLQLSLLVFKGRHSLITTLNTGIKKFAVENPAFNEKQNTVNAGLFSVYSYDQALNWQPLSFNLLAGYTKEDS DINFYDSEGFFTSTGITYQF
Sequences:
>Translated_340_residues MRKLLPVVISSILLSNFLAAEVAANSAPAVQPLAEKAGWEFTLGINLGYSAGRSQLNTNNDNAVNENLNNNGQAISKPFI FPTARAQYTFTELKTQIFAGDSREKISTAKFQYELGITHLFNNSSEMTVAYFPQMLSFNDAWQDPYLTGSTRTTTDENAQ GGRFALTRIAGSTITLKYAFAFTAIENEHSGQSLGLNAKQLTMLQRDSLYQRAEIETMYSIAPGIFFKPALQYTTRSADG EAHNFDQYGLQLSLLVFKGRHSLITTLNTGIKKFAVENPAFNEKQNTVNAGLFSVYSYDQALNWQPLSFNLLAGYTKEDS DINFYDSEGFFTSTGITYQF >Mature_340_residues MRKLLPVVISSILLSNFLAAEVAANSAPAVQPLAEKAGWEFTLGINLGYSAGRSQLNTNNDNAVNENLNNNGQAISKPFI FPTARAQYTFTELKTQIFAGDSREKISTAKFQYELGITHLFNNSSEMTVAYFPQMLSFNDAWQDPYLTGSTRTTTDENAQ GGRFALTRIAGSTITLKYAFAFTAIENEHSGQSLGLNAKQLTMLQRDSLYQRAEIETMYSIAPGIFFKPALQYTTRSADG EAHNFDQYGLQLSLLVFKGRHSLITTLNTGIKKFAVENPAFNEKQNTVNAGLFSVYSYDQALNWQPLSFNLLAGYTKEDS DINFYDSEGFFTSTGITYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37770; Mature: 37770
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLPVVISSILLSNFLAAEVAANSAPAVQPLAEKAGWEFTLGINLGYSAGRSQLNTNN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC DNAVNENLNNNGQAISKPFIFPTARAQYTFTELKTQIFAGDSREKISTAKFQYELGITHL CCCCCCCCCCCCCEECCCEEECCCCCEEEHHHHHHHEECCCCHHHHEEEEEEEEECEEEE FNNSSEMTVAYFPQMLSFNDAWQDPYLTGSTRTTTDENAQGGRFALTRIAGSTITLKYAF ECCCCCEEEEECHHHHCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEE AFTAIENEHSGQSLGLNAKQLTMLQRDSLYQRAEIETMYSIAPGIFFKPALQYTTRSADG EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCC EAHNFDQYGLQLSLLVFKGRHSLITTLNTGIKKFAVENPAFNEKQNTVNAGLFSVYSYDQ CCCCCHHHCCEEEEEEEECCCCEEHHHHHCHHHHEECCCCCCCCCCCHHCCEEEEEECCC ALNWQPLSFNLLAGYTKEDSDINFYDSEGFFTSTGITYQF CCCCCCCEEEEEECCCCCCCCCEEEECCCEEEECCCEEEC >Mature Secondary Structure MRKLLPVVISSILLSNFLAAEVAANSAPAVQPLAEKAGWEFTLGINLGYSAGRSQLNTNN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC DNAVNENLNNNGQAISKPFIFPTARAQYTFTELKTQIFAGDSREKISTAKFQYELGITHL CCCCCCCCCCCCCEECCCEEECCCCCEEEHHHHHHHEECCCCHHHHEEEEEEEEECEEEE FNNSSEMTVAYFPQMLSFNDAWQDPYLTGSTRTTTDENAQGGRFALTRIAGSTITLKYAF ECCCCCEEEEECHHHHCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEE AFTAIENEHSGQSLGLNAKQLTMLQRDSLYQRAEIETMYSIAPGIFFKPALQYTTRSADG EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCC EAHNFDQYGLQLSLLVFKGRHSLITTLNTGIKKFAVENPAFNEKQNTVNAGLFSVYSYDQ CCCCCHHHCCEEEEEEEECCCCEEHHHHHCHHHHEECCCCCCCCCCCHHCCEEEEEECCC ALNWQPLSFNLLAGYTKEDSDINFYDSEGFFTSTGITYQF CCCCCCCEEEEEECCCCCCCCCEEEECCCEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA