| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is glnA [H]
Identifier: 119947086
GI number: 119947086
Start: 4310715
End: 4312133
Strand: Direct
Name: glnA [H]
Synonym: Ping_3484
Alternate gene names: 119947086
Gene position: 4310715-4312133 (Clockwise)
Preceding gene: 119947078
Following gene: 119947087
Centisome position: 94.54
GC content: 44.47
Gene sequence:
>1419_bases ATGTCTACAAAAACAGTACAAGATGTTCTTGATTTTATTAAAGAGCAAGAGGTAAAATTCGTAGATTTACGCTTTACCGA TACACACGGTAAAGAGCAACACGTCTCTATTCCGCATCACCAAGCAAACGAAGACTTTTTCGAAGACGGTAAAATGTTTG ATGGCTCTTCAATTGCAGGATGGAAAGGCATTCAAGATTCGGACATGGTATTAATGCCGGATCCAACCACTGCTGTTCTT GACCCCTTTACGGATGATGCAACGCTTAACCTGCGTTGTGATGTGTTAGAGCCTAAAACAATGCTTGGTTACGATCGTGA CCCGCGATCTGTTGCTAAACGCGCCGAAGCATACCTGCGTTCAACGGGCATTGCTGACACTATTTTATTTGGTCCAGAGC CCGAGTTTTTCCTATTTGACGATGTTAAATACGGTAATACTATGCAAGGTGCATTCTTTTCCATTGATGCTAAAGAAGCG GCGTGGAACTCAGGTACCTCCTATGAAGAAGGCAATACAGGCCACCGTCCTGGTATCAAAGGTGGTTATTTCCCTGTCGC CCCCGTAGATTCCGCACAAAACATCCGTAGTGCTATGTGTCTTATCATGGAAGAGATGGGCCTTATTGTTGAAGCACATC ATCATGAAGTCGCAACTGCCGGCCAAAATGAAATCGCTTGTCGTTTTAATACTATGGTTAAAAAAGCCGATGAACTACAA ATTTACAAATACGTAGTACATAACGTTGCTCATGCCTACGGTCAAACCGCAACCTTCATGCCTAAACCGCTTGTTGGTGA TAACGGCTCAGGTAATCACTGTCACCAGTCCCTAGGCAAAGACGGTGTTAACCTGTTCTCCGGCGACCAGTACGGCGGGC TTTCTCAGCTAGCGCTTTATTATATTGGTGGCCTTATCAAACATGCTAAAGCACTTAATGCCTTTACTAACGCGTCAACT AACTCATATAAACGTCTAGTGCCACATTTTGAAGCACCGGTTATGTTAGCGTACTCTGCCGGTAATCGCAGCGCATCTAT CCGTATTCCAATCGTACCGTCACCAAAAGCGGCACGTGTTGAACTACGTTTCCCGGACCCAACGATGAACCCTTATTTAG GTTTTTCTGCGATGCTAATGGCGGGTCTTGACGGTATTAAAAACAAGATCCACCCTGGCGAGCCTCTTGATAAAGATTTA TACGATCTGCCTAAAGAAGAAGCGGATGCAATACCACAAGTTGCTGTTTCTTTTGAAGAAGCACTTGCTGAACTCGATGC TGACCGTGACTTTTTAACCGCAGGAGATGTTTTCTCGAATGACTCGATTGATGCCTACATCGCCCTTAAAACAGCTGAAT GTGAAGCTGTTTCTCGTGCAACGCATCCAAAAGAGTTCGAATTATACTACAGCGTATAA
Upstream 100 bases:
>100_bases TAATGGATAGCAGTCAGGTCGGCACAATTTTAGCCGTTTGAGTAATTAAATAAATTTGTTATGGTTGTCCACCACTTAAA TGTCAATTGAGGTTCTAAAC
Downstream 100 bases:
>100_bases GCAAAGAACTTAGTTAGGTTATGAACACCTGCTCACACTAATTCCGCTTAATTAACGGAATTGTCATCAGCTCAAAGGAT CAACTAGTTTGATCCTTTTA
Product: glutamine synthetase, type I
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSTKTVQDVLDFIKEQEVKFVDLRFTDTHGKEQHVSIPHHQANEDFFEDGKMFDGSSIAGWKGIQDSDMVLMPDPTTAVL DPFTDDATLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYLRSTGIADTILFGPEPEFFLFDDVKYGNTMQGAFFSIDAKEA AWNSGTSYEEGNTGHRPGIKGGYFPVAPVDSAQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTMVKKADELQ IYKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLGKDGVNLFSGDQYGGLSQLALYYIGGLIKHAKALNAFTNAST NSYKRLVPHFEAPVMLAYSAGNRSASIRIPIVPSPKAARVELRFPDPTMNPYLGFSAMLMAGLDGIKNKIHPGEPLDKDL YDLPKEEADAIPQVAVSFEEALAELDADRDFLTAGDVFSNDSIDAYIALKTAECEAVSRATHPKEFELYYSV
Sequences:
>Translated_472_residues MSTKTVQDVLDFIKEQEVKFVDLRFTDTHGKEQHVSIPHHQANEDFFEDGKMFDGSSIAGWKGIQDSDMVLMPDPTTAVL DPFTDDATLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYLRSTGIADTILFGPEPEFFLFDDVKYGNTMQGAFFSIDAKEA AWNSGTSYEEGNTGHRPGIKGGYFPVAPVDSAQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTMVKKADELQ IYKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLGKDGVNLFSGDQYGGLSQLALYYIGGLIKHAKALNAFTNAST NSYKRLVPHFEAPVMLAYSAGNRSASIRIPIVPSPKAARVELRFPDPTMNPYLGFSAMLMAGLDGIKNKIHPGEPLDKDL YDLPKEEADAIPQVAVSFEEALAELDADRDFLTAGDVFSNDSIDAYIALKTAECEAVSRATHPKEFELYYSV >Mature_471_residues STKTVQDVLDFIKEQEVKFVDLRFTDTHGKEQHVSIPHHQANEDFFEDGKMFDGSSIAGWKGIQDSDMVLMPDPTTAVLD PFTDDATLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYLRSTGIADTILFGPEPEFFLFDDVKYGNTMQGAFFSIDAKEAA WNSGTSYEEGNTGHRPGIKGGYFPVAPVDSAQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTMVKKADELQI YKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLGKDGVNLFSGDQYGGLSQLALYYIGGLIKHAKALNAFTNASTN SYKRLVPHFEAPVMLAYSAGNRSASIRIPIVPSPKAARVELRFPDPTMNPYLGFSAMLMAGLDGIKNKIHPGEPLDKDLY DLPKEEADAIPQVAVSFEEALAELDADRDFLTAGDVFSNDSIDAYIALKTAECEAVSRATHPKEFELYYSV
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=468, Percent_Identity=73.2905982905983, Blast_Score=739, Evalue=0.0, Organism=Escherichia coli, GI87081870, Length=201, Percent_Identity=29.3532338308458, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 51960; Mature: 51829
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKTVQDVLDFIKEQEVKFVDLRFTDTHGKEQHVSIPHHQANEDFFEDGKMFDGSSIAG CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCC WKGIQDSDMVLMPDPTTAVLDPFTDDATLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYLR CCCCCCCCEEEECCCCHHEECCCCCCCEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHH STGIADTILFGPEPEFFLFDDVKYGNTMQGAFFSIDAKEAAWNSGTSYEEGNTGHRPGIK HCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCC GGYFPVAPVDSAQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTMVKKADELQ CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCEEEEHHHHHHHHHHHH IYKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLGKDGVNLFSGDQYGGLSQLALY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCHHHHHHH YIGGLIKHAKALNAFTNASTNSYKRLVPHFEAPVMLAYSAGNRSASIRIPIVPSPKAARV HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEE ELRFPDPTMNPYLGFSAMLMAGLDGIKNKIHPGEPLDKDLYDLPKEEADAIPQVAVSFEE EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH ALAELDADRDFLTAGDVFSNDSIDAYIALKTAECEAVSRATHPKEFELYYSV HHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCHHHHHHCCCCCEEEEEEEC >Mature Secondary Structure STKTVQDVLDFIKEQEVKFVDLRFTDTHGKEQHVSIPHHQANEDFFEDGKMFDGSSIAG CCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCC WKGIQDSDMVLMPDPTTAVLDPFTDDATLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYLR CCCCCCCCEEEECCCCHHEECCCCCCCEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHH STGIADTILFGPEPEFFLFDDVKYGNTMQGAFFSIDAKEAAWNSGTSYEEGNTGHRPGIK HCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCC GGYFPVAPVDSAQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTMVKKADELQ CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCEEEEHHHHHHHHHHHH IYKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLGKDGVNLFSGDQYGGLSQLALY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCHHHHHHH YIGGLIKHAKALNAFTNASTNSYKRLVPHFEAPVMLAYSAGNRSASIRIPIVPSPKAARV HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEE ELRFPDPTMNPYLGFSAMLMAGLDGIKNKIHPGEPLDKDLYDLPKEEADAIPQVAVSFEE EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH ALAELDADRDFLTAGDVFSNDSIDAYIALKTAECEAVSRATHPKEFELYYSV HHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCHHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]