| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is cysH [H]
Identifier: 119947039
GI number: 119947039
Start: 4248402
End: 4249166
Strand: Direct
Name: cysH [H]
Synonym: Ping_3436
Alternate gene names: 119947039
Gene position: 4248402-4249166 (Clockwise)
Preceding gene: 119947038
Following gene: 119947068
Centisome position: 93.17
GC content: 42.75
Gene sequence:
>765_bases ATGACTAACAGATTGAATCTAACCCAGCTACTTAGTTTAGATAAAGCGCAACAGACTGAAGCCTTACAAGAAGCCAATGA CCTGCTTGAAAATAAAACCGCCCGTGAACGCGTTGAATGGGCGATTGAACACCTTGAAAGTGAATTTGTTTTATCGTCAA GTTTTGGCATTCAGGCAGCTGTCTGCCTGCATTTAATTACTCAGGTAAAAGCGGATACGCCGATTATTTTAACAGATACG GGTTATCTGTTTCCGGAGACCTATCGGTTTATTGATGCGTTAACTGAAAAATTAAATCTGAACTTGAAAACGTATCGTGC CGAGCACAGCAGTGCCTGGCAGGAAGCACGCTATGGTAAATTATGGGAGCAGGGTGTTGATGGCTTAACTCAGTACAACT TAATCAATAAAGTTGAACCAATGAAACGCGCGCTTAAGGATCTTAATGCAAAAACCTGGTTTTCGGGTTTACGCCGCTCG CAAGCATCCAGTCGTGGAAAACTGCCTGTATTAAGTATTCAAAATGGTTGTTTTAAGTTTTTACCTATTATTGATTGGAG TAATAAAGACGTTCATTACTATCTCAGCGATCATGGTCTTGAGTACCACCCTCTTTGGGAGCAAGGTTATGTTTCGGTGG GCGATGTGCAAACGTCTCAACCTCTGGGAGCTGGCATGAGCGAAGAAGAAACACGCTTCTTTGGTTTGAAACGCGAATGC GGACTGCATGAAGATGATGTAGAAGAGCAAGGAAGTGGGATTTAG
Upstream 100 bases:
>100_bases GGTCGTTGGGCAAATGAGCGTGAAAGCGGTGAATGTTTTGGTGATTTTGTTATCCGCGCTGCTATCATAGCTGAAGTTAT TATCGCTTCTAAGGATTTTC
Downstream 100 bases:
>100_bases AAAACAGGAAGGCTTGAAGGCTGTCAGCTGTCAGCCGAAAGCCATCAGCTCGAAGCGTTACCGCCATAACACAACATTTT AAAACGCCTTAACTGGCGTT
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTNRLNLTQLLSLDKAQQTEALQEANDLLENKTARERVEWAIEHLESEFVLSSSFGIQAAVCLHLITQVKADTPIILTDT GYLFPETYRFIDALTEKLNLNLKTYRAEHSSAWQEARYGKLWEQGVDGLTQYNLINKVEPMKRALKDLNAKTWFSGLRRS QASSRGKLPVLSIQNGCFKFLPIIDWSNKDVHYYLSDHGLEYHPLWEQGYVSVGDVQTSQPLGAGMSEEETRFFGLKREC GLHEDDVEEQGSGI
Sequences:
>Translated_254_residues MTNRLNLTQLLSLDKAQQTEALQEANDLLENKTARERVEWAIEHLESEFVLSSSFGIQAAVCLHLITQVKADTPIILTDT GYLFPETYRFIDALTEKLNLNLKTYRAEHSSAWQEARYGKLWEQGVDGLTQYNLINKVEPMKRALKDLNAKTWFSGLRRS QASSRGKLPVLSIQNGCFKFLPIIDWSNKDVHYYLSDHGLEYHPLWEQGYVSVGDVQTSQPLGAGMSEEETRFFGLKREC GLHEDDVEEQGSGI >Mature_253_residues TNRLNLTQLLSLDKAQQTEALQEANDLLENKTARERVEWAIEHLESEFVLSSSFGIQAAVCLHLITQVKADTPIILTDTG YLFPETYRFIDALTEKLNLNLKTYRAEHSSAWQEARYGKLWEQGVDGLTQYNLINKVEPMKRALKDLNAKTWFSGLRRSQ ASSRGKLPVLSIQNGCFKFLPIIDWSNKDVHYYLSDHGLEYHPLWEQGYVSVGDVQTSQPLGAGMSEEETRFFGLKRECG LHEDDVEEQGSGI
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=242, Percent_Identity=65.702479338843, Blast_Score=340, Evalue=4e-95, Organism=Saccharomyces cerevisiae, GI6325425, Length=230, Percent_Identity=31.304347826087, Blast_Score=108, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 28943; Mature: 28812
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRLNLTQLLSLDKAQQTEALQEANDLLENKTARERVEWAIEHLESEFVLSSSFGIQAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEECCCCCHHHH VCLHLITQVKADTPIILTDTGYLFPETYRFIDALTEKLNLNLKTYRAEHSSAWQEARYGK HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHH LWEQGVDGLTQYNLINKVEPMKRALKDLNAKTWFSGLRRSQASSRGKLPVLSIQNGCFKF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEE LPIIDWSNKDVHYYLSDHGLEYHPLWEQGYVSVGDVQTSQPLGAGMSEEETRFFGLKREC EEEEECCCCCEEEEECCCCCEECCCHHCCCEEECCCCCCCCCCCCCCCHHHHHHCCHHHC GLHEDDVEEQGSGI CCCCCCHHHCCCCC >Mature Secondary Structure TNRLNLTQLLSLDKAQQTEALQEANDLLENKTARERVEWAIEHLESEFVLSSSFGIQAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEECCCCCHHHH VCLHLITQVKADTPIILTDTGYLFPETYRFIDALTEKLNLNLKTYRAEHSSAWQEARYGK HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHH LWEQGVDGLTQYNLINKVEPMKRALKDLNAKTWFSGLRRSQASSRGKLPVLSIQNGCFKF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEE LPIIDWSNKDVHYYLSDHGLEYHPLWEQGYVSVGDVQTSQPLGAGMSEEETRFFGLKREC EEEEECCCCCEEEEECCCCCEECCCHHCCCEEECCCCCCCCCCCCCCCHHHHHHCCHHHC GLHEDDVEEQGSGI CCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA