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The map label for this gene is yvrC [H]

Identifier: 119946947

GI number: 119946947

Start: 4130600

End: 4131607

Strand: Direct

Name: yvrC [H]

Synonym: Ping_3341

Alternate gene names: 119946947

Gene position: 4130600-4131607 (Clockwise)

Preceding gene: 119946946

Following gene: 119946948

Centisome position: 90.59

GC content: 41.47

Gene sequence:

>1008_bases
ATGAATAATCTAAAACTGATCGTTTTCACCCTTCTTTTAGTGTTTTTTATTACTCTGATCCACTTTCAAAAAGGGCAAAT
ATTTGCCCTTTTTGACCAAGGTTTGGGTAACTTTACCACCCAAATAGAAGGACAGGATTTCCCCAAAACATTAATAGATA
CCACGGGCATTAAATTTATTTTAAAAAAAACACCCGTGCGCATTATCTCAGCCACCTTGGCGACCGATCATATGCTCTCA
GGTTTAATTAATCCGCAACGTTTAGTGGCAGTGAGCAGTTATGTTGATACTCCCAGTATGTCCAATATTGTGGGTTTTTT
TGATAAAAGTATTTACCGTACACAAGGAGAGATTGAATCTATGCTCGTGCTACAGCCTGATTTAGTGTTTGTCGCTTCCT
ACAGCAACCCCGAAACAGTGCGTTACCTCCTGCGCAGCGGCATTGCCATTGTGCGTCTCAGTGAATTTAATTCTTTTGCC
GATATTTTTAATAATATTCGCATTATCGCCAATGTCACCGATACAAAGGCAGCGGGTGAAACCATGATTGTCGATCTTCA
AAAACGCATCGCATTTATTAAAATGCAGGTGAAAGATAAAAAACCACCGCGCGTATTATATTACGATCTAAACGGTTACA
GCGTCGGCGGCAACTCTTTAATGGATGAGGCCATTCAACTTTCTGGCGGCATTAATGTAACCAACGACGTCCTTGCTGAC
GGTGAAAATAAAATCAGCGAAGAGCTGGCTATTTCATTACAACCCGATGTGATTGTCATGAACCAATGGATTTTTAATCA
GGCAGAGGGGCAAGTCTCCCCACGCACTATTTTAAAAAATAAAAAAGCCTGGGCAGATGTACCCGCCGTGAAAAACAATC
ACATTTATGCCGTTCCCGGTACCTGGCTCAGAAGTGTTTCCCAGCACCGGATCAAAGGTGTTGAAGCAATAGCTCAACTG
CTGCATCCAGCAATAGAAAGTTACCCTGAGAAAATCAATGTTCACTAA

Upstream 100 bases:

>100_bases
TGATAAAGACTATCAAGAAGTTTCAGGTTTTAACACTGATCCGCTTACAGCTTATATCGGCTTTAGCTTTAAGTAAAAAA
AAGCACTAACGGGAGGGTAA

Downstream 100 bases:

>100_bases
TTTAACCACCATCCGCTTAGTATTATTACTGTTAATGCTGCTGGTTATCGCTCTGACTGTCTTAGGGGTGTTACAAGGCC
CTGCTGATATTTCATTAAGT

Product: Fe ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MNNLKLIVFTLLLVFFITLIHFQKGQIFALFDQGLGNFTTQIEGQDFPKTLIDTTGIKFILKKTPVRIISATLATDHMLS
GLINPQRLVAVSSYVDTPSMSNIVGFFDKSIYRTQGEIESMLVLQPDLVFVASYSNPETVRYLLRSGIAIVRLSEFNSFA
DIFNNIRIIANVTDTKAAGETMIVDLQKRIAFIKMQVKDKKPPRVLYYDLNGYSVGGNSLMDEAIQLSGGINVTNDVLAD
GENKISEELAISLQPDVIVMNQWIFNQAEGQVSPRTILKNKKAWADVPAVKNNHIYAVPGTWLRSVSQHRIKGVEAIAQL
LHPAIESYPEKINVH

Sequences:

>Translated_335_residues
MNNLKLIVFTLLLVFFITLIHFQKGQIFALFDQGLGNFTTQIEGQDFPKTLIDTTGIKFILKKTPVRIISATLATDHMLS
GLINPQRLVAVSSYVDTPSMSNIVGFFDKSIYRTQGEIESMLVLQPDLVFVASYSNPETVRYLLRSGIAIVRLSEFNSFA
DIFNNIRIIANVTDTKAAGETMIVDLQKRIAFIKMQVKDKKPPRVLYYDLNGYSVGGNSLMDEAIQLSGGINVTNDVLAD
GENKISEELAISLQPDVIVMNQWIFNQAEGQVSPRTILKNKKAWADVPAVKNNHIYAVPGTWLRSVSQHRIKGVEAIAQL
LHPAIESYPEKINVH
>Mature_335_residues
MNNLKLIVFTLLLVFFITLIHFQKGQIFALFDQGLGNFTTQIEGQDFPKTLIDTTGIKFILKKTPVRIISATLATDHMLS
GLINPQRLVAVSSYVDTPSMSNIVGFFDKSIYRTQGEIESMLVLQPDLVFVASYSNPETVRYLLRSGIAIVRLSEFNSFA
DIFNNIRIIANVTDTKAAGETMIVDLQKRIAFIKMQVKDKKPPRVLYYDLNGYSVGGNSLMDEAIQLSGGINVTNDVLAD
GENKISEELAISLQPDVIVMNQWIFNQAEGQVSPRTILKNKKAWADVPAVKNNHIYAVPGTWLRSVSQHRIKGVEAIAQL
LHPAIESYPEKINVH

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37398; Mature: 37398

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLKLIVFTLLLVFFITLIHFQKGQIFALFDQGLGNFTTQIEGQDFPKTLIDTTGIKFI
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHCCCCEEE
LKKTPVRIISATLATDHMLSGLINPQRLVAVSSYVDTPSMSNIVGFFDKSIYRTQGEIES
EECCCHHHHHHHHHHHHHHHHCCCHHHHEEEHHHCCCCCHHHHHHHHHHHHHHCCCCHHE
MLVLQPDLVFVASYSNPETVRYLLRSGIAIVRLSEFNSFADIFNNIRIIANVTDTKAAGE
EEEECCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCEEEEEEECCCCCCCC
TMIVDLQKRIAFIKMQVKDKKPPRVLYYDLNGYSVGGNSLMDEAIQLSGGINVTNDVLAD
EEEEEHHHHHHEEEEEECCCCCCEEEEEECCCEECCCHHHHHHHHHHCCCCCCCHHHHCC
GENKISEELAISLQPDVIVMNQWIFNQAEGQVSPRTILKNKKAWADVPAVKNNHIYAVPG
CCHHHHHHHEEEECCCEEEEEHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCC
TWLRSVSQHRIKGVEAIAQLLHPAIESYPEKINVH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNNLKLIVFTLLLVFFITLIHFQKGQIFALFDQGLGNFTTQIEGQDFPKTLIDTTGIKFI
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHCCCCEEE
LKKTPVRIISATLATDHMLSGLINPQRLVAVSSYVDTPSMSNIVGFFDKSIYRTQGEIES
EECCCHHHHHHHHHHHHHHHHCCCHHHHEEEHHHCCCCCHHHHHHHHHHHHHHCCCCHHE
MLVLQPDLVFVASYSNPETVRYLLRSGIAIVRLSEFNSFADIFNNIRIIANVTDTKAAGE
EEEECCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCEEEEEEECCCCCCCC
TMIVDLQKRIAFIKMQVKDKKPPRVLYYDLNGYSVGGNSLMDEAIQLSGGINVTNDVLAD
EEEEEHHHHHHEEEEEECCCCCCEEEEEECCCEECCCHHHHHHHHHHCCCCCCCHHHHCC
GENKISEELAISLQPDVIVMNQWIFNQAEGQVSPRTILKNKKAWADVPAVKNNHIYAVPG
CCHHHHHHHEEEECCCEEEEEHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCC
TWLRSVSQHRIKGVEAIAQLLHPAIESYPEKINVH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]