| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946945
Identifier: 119946945
GI number: 119946945
Start: 4127163
End: 4128227
Strand: Direct
Name: 119946945
Synonym: Ping_3339
Alternate gene names: NA
Gene position: 4127163-4128227 (Clockwise)
Preceding gene: 119946944
Following gene: 119946946
Centisome position: 90.52
GC content: 39.81
Gene sequence:
>1065_bases ATGCTTCCCCTCAGGCGGATTAAAAAGCTGTTTCGTGTTCTGGCACATCGATTAACTTGGCCTACCATGTTTCTGCTTGT GCTGGCGCAGACAATGACTGTTTATCTGTTATTTATATTTGCCGGGGAAAGTGCATTAACCCGGCATCCTATGGACTTTA TTTATTATAATATGGTGGTGGTTTCCACGGTGGGTTTTGGCGATTTCAGCCCGACGAGCGAAATGGGAAAAGCCATTGTT GCCTTTGTGCAAATTCCATCGGGACTGATCGTTTTCGCCTCTTTTATCGGAAAAACCACGCAATTATTTATAAATTTAGC GAGAAAAAACATGAACGGTACGAGTAATTTTTATCATTATAATAATCATATTTTATTATTAGGTTGGGACACTTCTTCAA CAGAGCAGATAGTGCAGTTGATTCTTGGTGATAAAAAACGCCAAAAACGCCAAATATTATTATGCGTTACCGAGCAGATA AACAATCCGTTTCCAGATAATGATGAGGTTTCTTTTGTGCGTTTACGTAGTTTTTCCGATAACGAAGAACTTAATCGTAT CGCGTTAAGTAATGCAGAACGTATTATCATTGATGGTAAATCCGATGATGAAACCTTATCTATTGCACTTTGTATCTCCA CCTATACCAACTCCGATGCCAACATATCTGCGCATTTTTTTGATAAGACTAAAGCCGACTTATTAAAGGTTCACTGCCCG CAAATTGAATGCAGTATTGATAGCAGCGCACAAATGATGGTGCGCAGTATGCAGGATCCGGGATCAAGCCAAGTCACCAA GCACTTACTTTCAACCTTAACAGGTGCGACACTGTATTGTGTGCAGACACCTGAACTGAAAAAACCGATTCAGTTCGAGC TGCTCTTTAGCCGATTTAAAAGTAACCATGCGATGATGGTCATTGCCTTCAGCCATTTTAAAAATGGTGATGCAATGATC TTAAATCCATCTCCACAGACCCTTATCAATAGTGGCGATTTTTTACACTACATCGCTAATGAACGTATTCTTGTTGACGA AATAAACTGGAATGACTTCTCTTAA
Upstream 100 bases:
>100_bases CATTTAGATGCACTGGGTTACAACTATAAAGATGAAACAGAGAACCAGGCTTATCGTTTCTTTTTATCCCATGCGAATGA TCACTAAGAGTTAGTTGATA
Downstream 100 bases:
>100_bases ATTCATTTAACAGCAATTTATCAATTTTTATCCTTATCCTTATCAGGATTTTAACTGATTGATTTTATAAAAATTCAATG TACTCCTCCCGTTTAGAGAC
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: Potassium Channel Protein; Ion Transport 2 Domain-Containing Protein; Ion Transport 2 Domain Protein; Resembles Potassium Channels; Potassium Channel-Like Protein; Voltage-Gated Ion Channel Superfamily Protein; Transmembrane Cation Transporter; Cation Transporter Protein; Ion Channel Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLPLRRIKKLFRVLAHRLTWPTMFLLVLAQTMTVYLLFIFAGESALTRHPMDFIYYNMVVVSTVGFGDFSPTSEMGKAIV AFVQIPSGLIVFASFIGKTTQLFINLARKNMNGTSNFYHYNNHILLLGWDTSSTEQIVQLILGDKKRQKRQILLCVTEQI NNPFPDNDEVSFVRLRSFSDNEELNRIALSNAERIIIDGKSDDETLSIALCISTYTNSDANISAHFFDKTKADLLKVHCP QIECSIDSSAQMMVRSMQDPGSSQVTKHLLSTLTGATLYCVQTPELKKPIQFELLFSRFKSNHAMMVIAFSHFKNGDAMI LNPSPQTLINSGDFLHYIANERILVDEINWNDFS
Sequences:
>Translated_354_residues MLPLRRIKKLFRVLAHRLTWPTMFLLVLAQTMTVYLLFIFAGESALTRHPMDFIYYNMVVVSTVGFGDFSPTSEMGKAIV AFVQIPSGLIVFASFIGKTTQLFINLARKNMNGTSNFYHYNNHILLLGWDTSSTEQIVQLILGDKKRQKRQILLCVTEQI NNPFPDNDEVSFVRLRSFSDNEELNRIALSNAERIIIDGKSDDETLSIALCISTYTNSDANISAHFFDKTKADLLKVHCP QIECSIDSSAQMMVRSMQDPGSSQVTKHLLSTLTGATLYCVQTPELKKPIQFELLFSRFKSNHAMMVIAFSHFKNGDAMI LNPSPQTLINSGDFLHYIANERILVDEINWNDFS >Mature_354_residues MLPLRRIKKLFRVLAHRLTWPTMFLLVLAQTMTVYLLFIFAGESALTRHPMDFIYYNMVVVSTVGFGDFSPTSEMGKAIV AFVQIPSGLIVFASFIGKTTQLFINLARKNMNGTSNFYHYNNHILLLGWDTSSTEQIVQLILGDKKRQKRQILLCVTEQI NNPFPDNDEVSFVRLRSFSDNEELNRIALSNAERIIIDGKSDDETLSIALCISTYTNSDANISAHFFDKTKADLLKVHCP QIECSIDSSAQMMVRSMQDPGSSQVTKHLLSTLTGATLYCVQTPELKKPIQFELLFSRFKSNHAMMVIAFSHFKNGDAMI LNPSPQTLINSGDFLHYIANERILVDEINWNDFS
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40141; Mature: 40141
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLRRIKKLFRVLAHRLTWPTMFLLVLAQTMTVYLLFIFAGESALTRHPMDFIYYNMVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCHHHHHHHHHE VSTVGFGDFSPTSEMGKAIVAFVQIPSGLIVFASFIGKTTQLFINLARKNMNGTSNFYHY EEEECCCCCCCHHHHHHHHEEEHCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEE NNHILLLGWDTSSTEQIVQLILGDKKRQKRQILLCVTEQINNPFPDNDEVSFVRLRSFSD CCEEEEEEECCCCHHHHHHHHHCCCCHHHHEEEEEEEHHHCCCCCCCCCEEEEEEECCCC NEELNRIALSNAERIIIDGKSDDETLSIALCISTYTNSDANISAHFFDKTKADLLKVHCP CHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCCCHHHHEEEECC QIECSIDSSAQMMVRSMQDPGSSQVTKHLLSTLTGATLYCVQTPELKKPIQFELLFSRFK EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHC SNHAMMVIAFSHFKNGDAMILNPSPQTLINSGDFLHYIANERILVDEINWNDFS CCCEEEEEEEEECCCCCEEEECCCCHHHHCCCCEEEEECCCEEEEEECCCCCCC >Mature Secondary Structure MLPLRRIKKLFRVLAHRLTWPTMFLLVLAQTMTVYLLFIFAGESALTRHPMDFIYYNMVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCHHHHHHHHHE VSTVGFGDFSPTSEMGKAIVAFVQIPSGLIVFASFIGKTTQLFINLARKNMNGTSNFYHY EEEECCCCCCCHHHHHHHHEEEHCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEE NNHILLLGWDTSSTEQIVQLILGDKKRQKRQILLCVTEQINNPFPDNDEVSFVRLRSFSD CCEEEEEEECCCCHHHHHHHHHCCCCHHHHEEEEEEEHHHCCCCCCCCCEEEEEEECCCC NEELNRIALSNAERIIIDGKSDDETLSIALCISTYTNSDANISAHFFDKTKADLLKVHCP CHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCCCHHHHEEEECC QIECSIDSSAQMMVRSMQDPGSSQVTKHLLSTLTGATLYCVQTPELKKPIQFELLFSRFK EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHC SNHAMMVIAFSHFKNGDAMILNPSPQTLINSGDFLHYIANERILVDEINWNDFS CCCEEEEEEEEECCCCCEEEECCCCHHHHCCCCEEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA