| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is ilvA [H]
Identifier: 119946944
GI number: 119946944
Start: 4125614
End: 4127149
Strand: Direct
Name: ilvA [H]
Synonym: Ping_3338
Alternate gene names: 119946944
Gene position: 4125614-4127149 (Clockwise)
Preceding gene: 119946943
Following gene: 119946945
Centisome position: 90.48
GC content: 43.23
Gene sequence:
>1536_bases ATGACAGAATTATCCGCAGCACAATACTTAAAAAAAATCTTACTTGCTCCTGTTTATGAAGCAGCCATAGAAACACCCTT ACAACCGTTAACTAAGTTATCAGAGCGCTTTAATAATCAAATTTTATTAAAGCGTGAAGATCAGCAACCCGTGCATTCCT TTAAATTACGCGGTGCCTATAATAGATTATCGAATTTAACTGACGAGCAAAAAAGCTGCGGTGTGATTGCTGCCTCGGCA GGTAACCATGCCCAAGGTGTTGCGCTCTCAGCACAACGCATGGGGATGAAAGCAACGATAGTTATGCCCTGCACCACACC CGAGATAAAAGTCAGTGCAGTGCGGGCATTCGGTGCCGAGGTGGTGTTATTTGGTGATGCTTTTGATGCTGCCAGCAAGC ACTCTAAAGAACTGGCTGAATTACATAATTACACCTCAATTCCTCCTTTTGATGATCCCGATGTTATTGCCGGACAAGGT ACTGTTGGCAAAGAGTTATTACAGCAAAATGCCCACCTCGATAAAATTTTTGTCCCCGTCGGTGGCGGTGGATTGATTGC TGGTATTGCCGTTTATGTTAAACAGCTTTTACCCAATATTAAGGTGATTGGCGTTGAGCCTGACAATGCAGCTTGTTTAA AAGCCGCGTTGGAGCATGGTAGCCCGATAACCTTAGATAAAGTTGGATTATTTGCCGACGGTGTTGCCGTTAAGACCATT GGCAGTGAAACATTTCGTTTGTGTCAGCAATATGTTGATGAAGTGATCACCGTTAGCAGTGATGAAATCTGCACCGCAGT AAAAGATATCTTTGAAGAGACGCGCGCAATTTCGGAGCCTTCCGGGGCATTATCATTGGCAGGTTTAAAAAAATATTGTC AAGTACACGAAATTAAAAATCAAAACCTTGCCGCCATTTTAAGTGGAGCCAACCTCAACTTCCATTCCCTGCGTTATATC TCCGAGCGTTGCGAATTAGGTGAGCAGAAAGAGAGCGTGCTGGCTGTCACTATCCCTGAAAAACAGGGCGCTTTTTTAGC CTTTTGTAATCAGCTCGACGGGCGTGCTATTACCGAGTTTAATTATCGTTTAAATTCGCGTAAAAACGCAAATATTTTTG TTGGCGTACGCACCCCGCAAGGTGTTGATGAACTTTTAGCGTTGACCGAAAAACTGCACAAATCAGGTTATTCTGTTGCC GATTTAAGCAATGATGAAATGGCCAAACTGCATGTCCGTTATATGGTTGGTGGCGCACCCGTCAGTGCTATAAAAGAGCG TTTATACAGTTTTGAATTTCCTGAACAGCCTAATGCGCTGATTAAGTTTTTAAATATGCTTGGCACTCACGCTAATATAA CGCTATTTCATTACCGCAATCACGGCGCGGCTTATGGACAGGTTCTTGCCGGTTTTGAACTCGACGAAGGGGTTGATGCA TTCAGTGAACATTTAGATGCACTGGGTTACAACTATAAAGATGAAACAGAGAACCAGGCTTATCGTTTCTTTTTATCCCA TGCGAATGATCACTAA
Upstream 100 bases:
>100_bases GAGCATTCATTTTGCAGAAAATCTTCAAGCGGGCTCAGTAACACGCTTAGGTGAGCTATTTGCAAGTAAAGTTGAACATA AATAAAGGGTTGATAGCGCA
Downstream 100 bases:
>100_bases GAGTTAGTTGATAATGCTTCCCCTCAGGCGGATTAAAAAGCTGTTTCGTGTTCTGGCACATCGATTAACTTGGCCTACCA TGTTTCTGCTTGTGCTGGCG
Product: threonine dehydratase, biosynthetic
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MTELSAAQYLKKILLAPVYEAAIETPLQPLTKLSERFNNQILLKREDQQPVHSFKLRGAYNRLSNLTDEQKSCGVIAASA GNHAQGVALSAQRMGMKATIVMPCTTPEIKVSAVRAFGAEVVLFGDAFDAASKHSKELAELHNYTSIPPFDDPDVIAGQG TVGKELLQQNAHLDKIFVPVGGGGLIAGIAVYVKQLLPNIKVIGVEPDNAACLKAALEHGSPITLDKVGLFADGVAVKTI GSETFRLCQQYVDEVITVSSDEICTAVKDIFEETRAISEPSGALSLAGLKKYCQVHEIKNQNLAAILSGANLNFHSLRYI SERCELGEQKESVLAVTIPEKQGAFLAFCNQLDGRAITEFNYRLNSRKNANIFVGVRTPQGVDELLALTEKLHKSGYSVA DLSNDEMAKLHVRYMVGGAPVSAIKERLYSFEFPEQPNALIKFLNMLGTHANITLFHYRNHGAAYGQVLAGFELDEGVDA FSEHLDALGYNYKDETENQAYRFFLSHANDH
Sequences:
>Translated_511_residues MTELSAAQYLKKILLAPVYEAAIETPLQPLTKLSERFNNQILLKREDQQPVHSFKLRGAYNRLSNLTDEQKSCGVIAASA GNHAQGVALSAQRMGMKATIVMPCTTPEIKVSAVRAFGAEVVLFGDAFDAASKHSKELAELHNYTSIPPFDDPDVIAGQG TVGKELLQQNAHLDKIFVPVGGGGLIAGIAVYVKQLLPNIKVIGVEPDNAACLKAALEHGSPITLDKVGLFADGVAVKTI GSETFRLCQQYVDEVITVSSDEICTAVKDIFEETRAISEPSGALSLAGLKKYCQVHEIKNQNLAAILSGANLNFHSLRYI SERCELGEQKESVLAVTIPEKQGAFLAFCNQLDGRAITEFNYRLNSRKNANIFVGVRTPQGVDELLALTEKLHKSGYSVA DLSNDEMAKLHVRYMVGGAPVSAIKERLYSFEFPEQPNALIKFLNMLGTHANITLFHYRNHGAAYGQVLAGFELDEGVDA FSEHLDALGYNYKDETENQAYRFFLSHANDH >Mature_510_residues TELSAAQYLKKILLAPVYEAAIETPLQPLTKLSERFNNQILLKREDQQPVHSFKLRGAYNRLSNLTDEQKSCGVIAASAG NHAQGVALSAQRMGMKATIVMPCTTPEIKVSAVRAFGAEVVLFGDAFDAASKHSKELAELHNYTSIPPFDDPDVIAGQGT VGKELLQQNAHLDKIFVPVGGGGLIAGIAVYVKQLLPNIKVIGVEPDNAACLKAALEHGSPITLDKVGLFADGVAVKTIG SETFRLCQQYVDEVITVSSDEICTAVKDIFEETRAISEPSGALSLAGLKKYCQVHEIKNQNLAAILSGANLNFHSLRYIS ERCELGEQKESVLAVTIPEKQGAFLAFCNQLDGRAITEFNYRLNSRKNANIFVGVRTPQGVDELLALTEKLHKSGYSVAD LSNDEMAKLHVRYMVGGAPVSAIKERLYSFEFPEQPNALIKFLNMLGTHANITLFHYRNHGAAYGQVLAGFELDEGVDAF SEHLDALGYNYKDETENQAYRFFLSHANDH
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=297, Percent_Identity=34.3434343434343, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI33469958, Length=322, Percent_Identity=25.4658385093168, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI19923959, Length=324, Percent_Identity=27.1604938271605, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI295821202, Length=144, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI295821200, Length=144, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI4557415, Length=144, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1790207, Length=500, Percent_Identity=63.4, Blast_Score=644, Evalue=0.0, Organism=Escherichia coli, GI1789505, Length=289, Percent_Identity=41.522491349481, Blast_Score=198, Evalue=8e-52, Organism=Escherichia coli, GI1789235, Length=310, Percent_Identity=24.8387096774194, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI2367138, Length=199, Percent_Identity=25.6281407035176, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71991565, Length=325, Percent_Identity=36.9230769230769, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17537387, Length=317, Percent_Identity=35.0157728706625, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17508781, Length=285, Percent_Identity=33.6842105263158, Blast_Score=138, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6320930, Length=516, Percent_Identity=48.8372093023256, Blast_Score=450, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6322631, Length=293, Percent_Identity=39.2491467576792, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6319788, Length=267, Percent_Identity=26.5917602996255, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355833, Length=289, Percent_Identity=34.6020761245675, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24645328, Length=212, Percent_Identity=32.5471698113208, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55844; Mature: 55713
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELSAAQYLKKILLAPVYEAAIETPLQPLTKLSERFNNQILLKREDQQPVHSFKLRGAY CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH NRLSNLTDEQKSCGVIAASAGNHAQGVALSAQRMGMKATIVMPCTTPEIKVSAVRAFGAE HHHHCCCCHHHCCCEEEECCCCCCCCEEEHHHHCCCEEEEEEECCCCCHHHHHHHHCCCE VVLFGDAFDAASKHSKELAELHNYTSIPPFDDPDVIAGQGTVGKELLQQNAHLDKIFVPV EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHCCCCCCEEEEEE GGGGLIAGIAVYVKQLLPNIKVIGVEPDNAACLKAALEHGSPITLDKVGLFADGVAVKTI CCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCEECCEEEEEC GSETFRLCQQYVDEVITVSSDEICTAVKDIFEETRAISEPSGALSLAGLKKYCQVHEIKN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCC QNLAAILSGANLNFHSLRYISERCELGEQKESVLAVTIPEKQGAFLAFCNQLDGRAITEF CCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCEEEEE NYRLNSRKNANIFVGVRTPQGVDELLALTEKLHKSGYSVADLSNDEMAKLHVRYMVGGAP EEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHEEEEEEEECCCC VSAIKERLYSFEFPEQPNALIKFLNMLGTHANITLFHYRNHGAAYGQVLAGFELDEGVDA HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCHHHH FSEHLDALGYNYKDETENQAYRFFLSHANDH HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TELSAAQYLKKILLAPVYEAAIETPLQPLTKLSERFNNQILLKREDQQPVHSFKLRGAY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH NRLSNLTDEQKSCGVIAASAGNHAQGVALSAQRMGMKATIVMPCTTPEIKVSAVRAFGAE HHHHCCCCHHHCCCEEEECCCCCCCCEEEHHHHCCCEEEEEEECCCCCHHHHHHHHCCCE VVLFGDAFDAASKHSKELAELHNYTSIPPFDDPDVIAGQGTVGKELLQQNAHLDKIFVPV EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHCCCCCCEEEEEE GGGGLIAGIAVYVKQLLPNIKVIGVEPDNAACLKAALEHGSPITLDKVGLFADGVAVKTI CCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCEECCEEEEEC GSETFRLCQQYVDEVITVSSDEICTAVKDIFEETRAISEPSGALSLAGLKKYCQVHEIKN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCC QNLAAILSGANLNFHSLRYISERCELGEQKESVLAVTIPEKQGAFLAFCNQLDGRAITEF CCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCEEEEE NYRLNSRKNANIFVGVRTPQGVDELLALTEKLHKSGYSVADLSNDEMAKLHVRYMVGGAP EEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHEEEEEEEECCCC VSAIKERLYSFEFPEQPNALIKFLNMLGTHANITLFHYRNHGAAYGQVLAGFELDEGVDA HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCHHHH FSEHLDALGYNYKDETENQAYRFFLSHANDH HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]