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The map label for this gene is rsgA1 [H]

Identifier: 119946942

GI number: 119946942

Start: 4123628

End: 4124671

Strand: Direct

Name: rsgA1 [H]

Synonym: Ping_3336

Alternate gene names: 119946942

Gene position: 4123628-4124671 (Clockwise)

Preceding gene: 119946933

Following gene: 119946943

Centisome position: 90.44

GC content: 43.58

Gene sequence:

>1044_bases
GTGACCAAGAAGAAACGACTCAGTAAAAATCAAGCACGCCGCGTTCAAACTAATCAGAAAAAACGTTTAACTAAAGATAA
TATCGAACAGTGGAACGAGTCTGAACTTGGCCCGCAACTCGAAGGCATAGTGATCAGTCGTTTTGGACAGCATGCAGATG
TTGAAGACGAGCATGGCAAAATCGAACGTTGTAATTTGCGCCGCGGCGTAAAATCGCTGGTAACGGGAGATCGGGTTGTA
TGGCGTGCAGGTAATCAGGCTTATCATGGTATCAGTGGCGTGATTGAAGCGGTACATCCGCGTACAACAGTACTGACACG
TCCTGATTATTATGATGGTATAAAACCTATCGCGGCCAATATTGACCATATTATTATCGTCAGCTCCATTGCCCCTGAGT
TTTCTCGTAATATTATTGATCGCTACCTGATTGCCTGTGAAGATATCGGCATTACGCCCATTATCGTTTTAAATAAAAGT
GATTTATTGAATGAGCAATCAGCAAAGTCAATCGATCAGGAATTACAAAGTTACCGGGATATCGGTTATCAGGTTTTATA
TAGTTCGATGCACGGCGACGGCTTAGTAGGGCTAAAAAGTGCAATGAAAGATAAAATTAATATTTTTGTCGGTCAGTCAG
GTGTGGGTAAAACATCCTTAGTCAATCTGTTATTACCTGAAATTGAAGCCGCGACAGCTGAAATTTCGGAAAACTCTGGA
TTAGGTAAACATACCACGACCACGGCACGTCTTTATCATTTCCCCGATGGAGGTGATCTTATTGACAGCCCGGGCATTCG
TGAGTTTTCATTATGGCATCTGGAGCCTGAACGCATTGCGACTGGATTCATCGAATTTCGTCCTTTTTTAGGACAATGCC
GTTTCCGGGATTGTAAACATCAGATAGATCCCGGTTGTGCACTGGTTAAGGCCGTTGCCGAGGGGCAAATAGATAATGCT
CGCTACCGTAGCTTTTTACGCATTTTAGAGACCATGGATGATGCAAAAAATGCGCGCCATCGTCCACCCAACACCTATGA
TTAA

Upstream 100 bases:

>100_bases
TCATCGTTATTCTGATCCTTTTCGCTACAAGAGAGCCGCATTTCTAAATTAATATAGTATGATACGGTATTAACACAATG
AGTGATAGCTAAGGAAACCT

Downstream 100 bases:

>100_bases
CAACGCCTTTACGGTGTACAAAATTTAGGTACAATTTTCGGCATAAATTAACAAAATGAGAAGAACATGATTGACCAACT
TAAAATTATTGGGCAATACC

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTKKKRLSKNQARRVQTNQKKRLTKDNIEQWNESELGPQLEGIVISRFGQHADVEDEHGKIERCNLRRGVKSLVTGDRVV
WRAGNQAYHGISGVIEAVHPRTTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLIACEDIGITPIIVLNKS
DLLNEQSAKSIDQELQSYRDIGYQVLYSSMHGDGLVGLKSAMKDKINIFVGQSGVGKTSLVNLLLPEIEAATAEISENSG
LGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLEPERIATGFIEFRPFLGQCRFRDCKHQIDPGCALVKAVAEGQIDNA
RYRSFLRILETMDDAKNARHRPPNTYD

Sequences:

>Translated_347_residues
MTKKKRLSKNQARRVQTNQKKRLTKDNIEQWNESELGPQLEGIVISRFGQHADVEDEHGKIERCNLRRGVKSLVTGDRVV
WRAGNQAYHGISGVIEAVHPRTTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLIACEDIGITPIIVLNKS
DLLNEQSAKSIDQELQSYRDIGYQVLYSSMHGDGLVGLKSAMKDKINIFVGQSGVGKTSLVNLLLPEIEAATAEISENSG
LGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLEPERIATGFIEFRPFLGQCRFRDCKHQIDPGCALVKAVAEGQIDNA
RYRSFLRILETMDDAKNARHRPPNTYD
>Mature_346_residues
TKKKRLSKNQARRVQTNQKKRLTKDNIEQWNESELGPQLEGIVISRFGQHADVEDEHGKIERCNLRRGVKSLVTGDRVVW
RAGNQAYHGISGVIEAVHPRTTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLIACEDIGITPIIVLNKSD
LLNEQSAKSIDQELQSYRDIGYQVLYSSMHGDGLVGLKSAMKDKINIFVGQSGVGKTSLVNLLLPEIEAATAEISENSGL
GKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLEPERIATGFIEFRPFLGQCRFRDCKHQIDPGCALVKAVAEGQIDNAR
YRSFLRILETMDDAKNARHRPPNTYD

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=342, Percent_Identity=57.6023391812866, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38974; Mature: 38843

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKRLSKNQARRVQTNQKKRLTKDNIEQWNESELGPQLEGIVISRFGQHADVEDEHGK
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCCCCCCC
IERCNLRRGVKSLVTGDRVVWRAGNQAYHGISGVIEAVHPRTTVLTRPDYYDGIKPIAAN
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHCC
IDHIIIVSSIAPEFSRNIIDRYLIACEDIGITPIIVLNKSDLLNEQSAKSIDQELQSYRD
CCEEEEEEHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHH
IGYQVLYSSMHGDGLVGLKSAMKDKINIFVGQSGVGKTSLVNLLLPEIEAATAEISENSG
HHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLEPERIATGFIEFRPFLGQCRFRDCKH
CCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHH
QIDPGCALVKAVAEGQIDNARYRSFLRILETMDDAKNARHRPPNTYD
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TKKKRLSKNQARRVQTNQKKRLTKDNIEQWNESELGPQLEGIVISRFGQHADVEDEHGK
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCCCCCCC
IERCNLRRGVKSLVTGDRVVWRAGNQAYHGISGVIEAVHPRTTVLTRPDYYDGIKPIAAN
HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHCC
IDHIIIVSSIAPEFSRNIIDRYLIACEDIGITPIIVLNKSDLLNEQSAKSIDQELQSYRD
CCEEEEEEHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHH
IGYQVLYSSMHGDGLVGLKSAMKDKINIFVGQSGVGKTSLVNLLLPEIEAATAEISENSG
HHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLEPERIATGFIEFRPFLGQCRFRDCKH
CCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHH
QIDPGCALVKAVAEGQIDNARYRSFLRILETMDDAKNARHRPPNTYD
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA