| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946851
Identifier: 119946851
GI number: 119946851
Start: 4004598
End: 4004927
Strand: Direct
Name: 119946851
Synonym: Ping_3245
Alternate gene names: NA
Gene position: 4004598-4004927 (Clockwise)
Preceding gene: 119946850
Following gene: 119946852
Centisome position: 87.83
GC content: 43.94
Gene sequence:
>330_bases ATGATCTATGTACTTTTTCGCTGGGACCTTAAAGCTGGGACCGAGCAATCTTTTAAAGAGGGCTGGACAGAAATAATTCA TCGCAATATCGAAAAACACGGTGCCCTTGGATCGCGTTTGCATAAAACCAAAGACAATCAGTGGATATCTTATAGCAAGT GGCTCAGCGAAGTACATTTTAAGCGCGCACAAACGATACATGATCAGCACGAAGAGGCACGTATTAAAATGGTCAGTGCA ATCACCAAAACCTATCCACCGATAGTGATGGTGCCGGTTTTAGATAATGCAGTCGTTATAGATCCCGCGCAGCCGCAGTC GCATTTATAA
Upstream 100 bases:
>100_bases AAATACTGTCTAAGTTAACGCGTTAGCGTGCTTCCTATTGACATAAACCTAATTTTCGAAAAAGCTTGTAGATAACTATC ACAATAACATTGGAGAGATT
Downstream 100 bases:
>100_bases AATGACCATGCCCTGCCAAATGATGAGGCTATATGACGTTGCAAATAACACCCATAAACTAAATTTTTGACCATAAGACA AAGGTTTTTAGCCATTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MIYVLFRWDLKAGTEQSFKEGWTEIIHRNIEKHGALGSRLHKTKDNQWISYSKWLSEVHFKRAQTIHDQHEEARIKMVSA ITKTYPPIVMVPVLDNAVVIDPAQPQSHL
Sequences:
>Translated_109_residues MIYVLFRWDLKAGTEQSFKEGWTEIIHRNIEKHGALGSRLHKTKDNQWISYSKWLSEVHFKRAQTIHDQHEEARIKMVSA ITKTYPPIVMVPVLDNAVVIDPAQPQSHL >Mature_109_residues MIYVLFRWDLKAGTEQSFKEGWTEIIHRNIEKHGALGSRLHKTKDNQWISYSKWLSEVHFKRAQTIHDQHEEARIKMVSA ITKTYPPIVMVPVLDNAVVIDPAQPQSHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12717; Mature: 12717
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYVLFRWDLKAGTEQSFKEGWTEIIHRNIEKHGALGSRLHKTKDNQWISYSKWLSEVHF CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHHH KRAQTIHDQHEEARIKMVSAITKTYPPIVMVPVLDNAVVIDPAQPQSHL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC >Mature Secondary Structure MIYVLFRWDLKAGTEQSFKEGWTEIIHRNIEKHGALGSRLHKTKDNQWISYSKWLSEVHF CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHHH KRAQTIHDQHEEARIKMVSAITKTYPPIVMVPVLDNAVVIDPAQPQSHL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA