| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946852
Identifier: 119946852
GI number: 119946852
Start: 4005040
End: 4005447
Strand: Direct
Name: 119946852
Synonym: Ping_3246
Alternate gene names: NA
Gene position: 4005040-4005447 (Clockwise)
Preceding gene: 119946851
Following gene: 119946853
Centisome position: 87.84
GC content: 40.93
Gene sequence:
>408_bases ATGAGTAACGTGTTAGATATACAGCAGATTCAAAAAATTCAACAATATGATGCGCAGCAGCGTTACGACTATTTACTTAA AGAAGTCATTAATAATGGGCAAATTTGGTTACTGGTTGATGAGCATGGTTGCGTAATGCTAAATACCGAAGAAGAAGACT GTGTGCCGGTTTGGCCGAATAAAGAATTTGCCGAATCCTGGGCGACTGAAGAATGGTCACACTGCAAACCAGAATCTATT TCTCTGGCAAAATGGCATAGTCGTTGGACACATGGTCTGGAGGGAGATGAACTCGCCATTGTGGTTTTTCCAAATCAGAA TAATGAAGGATTGATTTTCTTCCCCGACGAGTTTGATTATGAACTGCAGCAGCAGGCGAAAAAAACACGCGCTAAAAAAC GTCATTAA
Upstream 100 bases:
>100_bases CTGCCAAATGATGAGGCTATATGACGTTGCAAATAACACCCATAAACTAAATTTTTGACCATAAGACAAAGGTTTTTAGC CATTAAACAGGACATTTAAA
Downstream 100 bases:
>100_bases CAATCTGTTATAAAGAAACCCGATAATCTGAGCGGGTTTCTTTAATCACTTAACGCTTTAATATCCATCACCCCGTATAA GTTTGCCCCTATTATGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSNVLDIQQIQKIQQYDAQQRYDYLLKEVINNGQIWLLVDEHGCVMLNTEEEDCVPVWPNKEFAESWATEEWSHCKPESI SLAKWHSRWTHGLEGDELAIVVFPNQNNEGLIFFPDEFDYELQQQAKKTRAKKRH
Sequences:
>Translated_135_residues MSNVLDIQQIQKIQQYDAQQRYDYLLKEVINNGQIWLLVDEHGCVMLNTEEEDCVPVWPNKEFAESWATEEWSHCKPESI SLAKWHSRWTHGLEGDELAIVVFPNQNNEGLIFFPDEFDYELQQQAKKTRAKKRH >Mature_134_residues SNVLDIQQIQKIQQYDAQQRYDYLLKEVINNGQIWLLVDEHGCVMLNTEEEDCVPVWPNKEFAESWATEEWSHCKPESIS LAKWHSRWTHGLEGDELAIVVFPNQNNEGLIFFPDEFDYELQQQAKKTRAKKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16006; Mature: 15875
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVLDIQQIQKIQQYDAQQRYDYLLKEVINNGQIWLLVDEHGCVMLNTEEEDCVPVWPN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEECCCC KEFAESWATEEWSHCKPESISLAKWHSRWTHGLEGDELAIVVFPNQNNEGLIFFPDEFDY HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCH ELQQQAKKTRAKKRH HHHHHHHHHHHHCCC >Mature Secondary Structure SNVLDIQQIQKIQQYDAQQRYDYLLKEVINNGQIWLLVDEHGCVMLNTEEEDCVPVWPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEECCCC KEFAESWATEEWSHCKPESISLAKWHSRWTHGLEGDELAIVVFPNQNNEGLIFFPDEFDY HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCH ELQQQAKKTRAKKRH HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA