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The map label for this gene is 119946758

Identifier: 119946758

GI number: 119946758

Start: 3879376

End: 3880305

Strand: Direct

Name: 119946758

Synonym: Ping_3151

Alternate gene names: NA

Gene position: 3879376-3880305 (Clockwise)

Preceding gene: 161986628

Following gene: 119946761

Centisome position: 85.08

GC content: 37.1

Gene sequence:

>930_bases
ATGTTTGAATTAGCAACCGCCTTAGGGCTAAAGATACTACCGCTTTACATCACAATAGCCCTAGGATATCTCTTTTCACG
TTATCTAAGAGGAGAGCGTGATGGTATCGCCTCTTTGCTGATCTATCTCATTGGCCCTGTAGTTATTTTTATGGCTTCAT
ACAAAGTGCAGTTAAATTTAGCAGTCATTATGCTGCCTATACTGCTTTTTATTCTCAATAGTTTCTTGGCTCTTGGGACA
TTGAGAATAAGTAAAAACTTTTTCTCCGATAACACCAAAAATATTTTAGCTTTTTCGGCAGGAACTGGAAATACCGGATA
CTTTGGTATTCCTTTGGCCATTATGATTTTAAGTGAAGAGCTAGCAAATATTTATATTTTTACTGTGCTCGCGTCCTTGC
TTTATGAGAGTACTGTTGGCTTTTTTGTCGTTGCAAAAGGCCACTACACAATCAATCAAAGCCTGGTAAAAGTGGCTAAA
CTCCCTTCTATCTATGCACTGGTTTTGGGATTGATTTTTAATGTCTCAAACATAGAGTTAAATACAAACCTTCTTGATTA
TCTTGATTATTTCAAAGGAGCCTATGCAATTTTAGGGATGATGATGATAGGTATGGGCCTTAAAGGCCTGGGAAATGTTG
GGATAGACAAAATGTTTATGACTTTTGCATTTACTATTAAATTTCTTATTTATCCTCTCTGCGTTCTTATTATCATTTGG
ATTGATGCTTATTATTTCAACTTTTTCAATTCTGATCTCTATAAAGTAATGTTTCTTTTTGCCATTCCTCCCATGGCAGG
CAATACCGTAGCAGTGGCGTCACTTTTAAATGTTCACCCTGAAAAAGCAGCCCTGGCAGTGGTTATCAGCACAGCGATTT
CTATTGTCACCATTCCGGTTATGATCGCCCTGTTTTTAGGTACTTTTTGA

Upstream 100 bases:

>100_bases
TAACAATGGATGCGCGTGCTTTACTTCCTCAAAAAAGCAAATCCTAAATAGCCGCTAGCAATAACAAAATATTCGCTTCT
GAAAAAAAATTAGGATTAAA

Downstream 100 bases:

>100_bases
GTCTTGCCACTTCTTAACAGGTCTGAGTATAGGAAGAATAAAAACGTATTCTATGTCGGTTTCTAGCTGATTGGCGGGGT
TAAATGAGCATCTGATTGCG

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Auxin Efflux Carrier Family Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MFELATALGLKILPLYITIALGYLFSRYLRGERDGIASLLIYLIGPVVIFMASYKVQLNLAVIMLPILLFILNSFLALGT
LRISKNFFSDNTKNILAFSAGTGNTGYFGIPLAIMILSEELANIYIFTVLASLLYESTVGFFVVAKGHYTINQSLVKVAK
LPSIYALVLGLIFNVSNIELNTNLLDYLDYFKGAYAILGMMMIGMGLKGLGNVGIDKMFMTFAFTIKFLIYPLCVLIIIW
IDAYYFNFFNSDLYKVMFLFAIPPMAGNTVAVASLLNVHPEKAALAVVISTAISIVTIPVMIALFLGTF

Sequences:

>Translated_309_residues
MFELATALGLKILPLYITIALGYLFSRYLRGERDGIASLLIYLIGPVVIFMASYKVQLNLAVIMLPILLFILNSFLALGT
LRISKNFFSDNTKNILAFSAGTGNTGYFGIPLAIMILSEELANIYIFTVLASLLYESTVGFFVVAKGHYTINQSLVKVAK
LPSIYALVLGLIFNVSNIELNTNLLDYLDYFKGAYAILGMMMIGMGLKGLGNVGIDKMFMTFAFTIKFLIYPLCVLIIIW
IDAYYFNFFNSDLYKVMFLFAIPPMAGNTVAVASLLNVHPEKAALAVVISTAISIVTIPVMIALFLGTF
>Mature_309_residues
MFELATALGLKILPLYITIALGYLFSRYLRGERDGIASLLIYLIGPVVIFMASYKVQLNLAVIMLPILLFILNSFLALGT
LRISKNFFSDNTKNILAFSAGTGNTGYFGIPLAIMILSEELANIYIFTVLASLLYESTVGFFVVAKGHYTINQSLVKVAK
LPSIYALVLGLIFNVSNIELNTNLLDYLDYFKGAYAILGMMMIGMGLKGLGNVGIDKMFMTFAFTIKFLIYPLCVLIIIW
IDAYYFNFFNSDLYKVMFLFAIPPMAGNTVAVASLLNVHPEKAALAVVISTAISIVTIPVMIALFLGTF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34052; Mature: 34052

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELATALGLKILPLYITIALGYLFSRYLRGERDGIASLLIYLIGPVVIFMASYKVQLNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIMLPILLFILNSFLALGTLRISKNFFSDNTKNILAFSAGTGNTGYFGIPLAIMILSEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
LANIYIFTVLASLLYESTVGFFVVAKGHYTINQSLVKVAKLPSIYALVLGLIFNVSNIEL
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE
NTNLLDYLDYFKGAYAILGMMMIGMGLKGLGNVGIDKMFMTFAFTIKFLIYPLCVLIIIW
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAYYFNFFNSDLYKVMFLFAIPPMAGNTVAVASLLNVHPEKAALAVVISTAISIVTIPV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MIALFLGTF
HHHHHHHCC
>Mature Secondary Structure
MFELATALGLKILPLYITIALGYLFSRYLRGERDGIASLLIYLIGPVVIFMASYKVQLNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIMLPILLFILNSFLALGTLRISKNFFSDNTKNILAFSAGTGNTGYFGIPLAIMILSEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
LANIYIFTVLASLLYESTVGFFVVAKGHYTINQSLVKVAKLPSIYALVLGLIFNVSNIEL
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE
NTNLLDYLDYFKGAYAILGMMMIGMGLKGLGNVGIDKMFMTFAFTIKFLIYPLCVLIIIW
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAYYFNFFNSDLYKVMFLFAIPPMAGNTVAVASLLNVHPEKAALAVVISTAISIVTIPV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MIALFLGTF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA