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The map label for this gene is yciM [H]

Identifier: 119946631

GI number: 119946631

Start: 3710269

End: 3711441

Strand: Reverse

Name: yciM [H]

Synonym: Ping_3010

Alternate gene names: 119946631

Gene position: 3711441-3710269 (Counterclockwise)

Preceding gene: 119946632

Following gene: 119946630

Centisome position: 81.4

GC content: 39.81

Gene sequence:

>1173_bases
GTGCAAGAGCTGTTTTTTCTTTTACTCCCTGTCGCCGCCTTATATGGCTGGTACATGGGAGTCAGAAGCGTACATCAAAA
AAAACAAAAAAAAGGTAATAAACTCAGCAGAGATTACGTCCAAGGGTTGAACTTTTTGTTAAGCGATCAACCCGATAAAG
CGGTTGATCACTTTATTGCTCTGCTGGAGGTTGATAATGAAACCATTGAAACTCACCTTGCATTGGGCAACCTATTCCGT
CAGCGTGGCGAAGTCGAACGTGCTATTCGCATTCACCAGAACTTAATCGCTCGTCCCTCACTGACACTAGAACAACGAGA
TTTAGCTTTGCTGCAGTTAGGCAAAGACTTTTACCAGGCAGGTTTATTTGATCGCAGTGAAGAAACATTTGTACAGTTAA
AGGCATCGCCTGAGTATCAGGAGGTCGCACTGGAAAATTTGCTGCTAATTTATCAGCAGCTTAAAGAATGGAAAGATGCG
GTGAGAGTGACTGAGTCTCTGTATAAATTATCTAAGGGGACAAAAAAGCGCAGAACGTTATCCTATCTCTACTGCAGTTT
GGCGGATCAATTTAAAAATCCGAGCGATGACAAACAAAAAATTAAACTTTATCAAAAGGCATTAACTGTTTTTCCAAATT
GTATGCGCGCAAATATCGCTCTCTGTGATTATTATATTTTGCAAAATAAGCCGCAAAAGGCGCTGCAAATTTTACAATCA
ATTCCTGAACTGGATATTGATTTTACCGAGGTTATATTAGACAGGTTATTAAAATTACATCAGCAGCAGGGCAGTGAACA
GGAATTAATCGGCTACCTTTATAGTATCGTCAGTATAGGAGCAGGGGCCAGTGCCGTTATATTGTTAGCTGAACTTATTG
CTAAATATCATGGCATTGAAAAAGCCCAGGAATTCATGCTGCAAGAGTTACGGCGTAACACTACGATGAAAGGCTTTAAC
CATTTAATGACTTACCATTTGCAGTTAGCCCAATCGATAAGTGAAAAAGAGAGTCTTACTTTTTTACAAAAACTAGTGTC
AGAACAGATTAAACTGCGCCCTAAATATCGCTGTCAAAAATGTGGATATTCGAGCAAAAAATTATATTGGCAATGCCCTT
CCTGTAAAAATTGGGGAAGAATTAAGCCTATTCGCGGCCTTGATGGCGAATAA

Upstream 100 bases:

>100_bases
GAAGTTAAAAATAAAAAATAGGCAATTACTTAAAATGAATAAAAAGCACAGTAAGGAGCTTAATGAGTTACGTGCCTTAC
CAGTGAAAGATTAACTTTTA

Downstream 100 bases:

>100_bases
AAAATGAATGCTTAAAGGCTGGAGCGCTGGAAAGTAGGAAGGCTGGAACGCCTTCTAGCTTTCCAGCCTTCTCGCCTTAA
TATGTAAATTATAGGAAATA

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MQELFFLLLPVAALYGWYMGVRSVHQKKQKKGNKLSRDYVQGLNFLLSDQPDKAVDHFIALLEVDNETIETHLALGNLFR
QRGEVERAIRIHQNLIARPSLTLEQRDLALLQLGKDFYQAGLFDRSEETFVQLKASPEYQEVALENLLLIYQQLKEWKDA
VRVTESLYKLSKGTKKRRTLSYLYCSLADQFKNPSDDKQKIKLYQKALTVFPNCMRANIALCDYYILQNKPQKALQILQS
IPELDIDFTEVILDRLLKLHQQQGSEQELIGYLYSIVSIGAGASAVILLAELIAKYHGIEKAQEFMLQELRRNTTMKGFN
HLMTYHLQLAQSISEKESLTFLQKLVSEQIKLRPKYRCQKCGYSSKKLYWQCPSCKNWGRIKPIRGLDGE

Sequences:

>Translated_390_residues
MQELFFLLLPVAALYGWYMGVRSVHQKKQKKGNKLSRDYVQGLNFLLSDQPDKAVDHFIALLEVDNETIETHLALGNLFR
QRGEVERAIRIHQNLIARPSLTLEQRDLALLQLGKDFYQAGLFDRSEETFVQLKASPEYQEVALENLLLIYQQLKEWKDA
VRVTESLYKLSKGTKKRRTLSYLYCSLADQFKNPSDDKQKIKLYQKALTVFPNCMRANIALCDYYILQNKPQKALQILQS
IPELDIDFTEVILDRLLKLHQQQGSEQELIGYLYSIVSIGAGASAVILLAELIAKYHGIEKAQEFMLQELRRNTTMKGFN
HLMTYHLQLAQSISEKESLTFLQKLVSEQIKLRPKYRCQKCGYSSKKLYWQCPSCKNWGRIKPIRGLDGE
>Mature_390_residues
MQELFFLLLPVAALYGWYMGVRSVHQKKQKKGNKLSRDYVQGLNFLLSDQPDKAVDHFIALLEVDNETIETHLALGNLFR
QRGEVERAIRIHQNLIARPSLTLEQRDLALLQLGKDFYQAGLFDRSEETFVQLKASPEYQEVALENLLLIYQQLKEWKDA
VRVTESLYKLSKGTKKRRTLSYLYCSLADQFKNPSDDKQKIKLYQKALTVFPNCMRANIALCDYYILQNKPQKALQILQS
IPELDIDFTEVILDRLLKLHQQQGSEQELIGYLYSIVSIGAGASAVILLAELIAKYHGIEKAQEFMLQELRRNTTMKGFN
HLMTYHLQLAQSISEKESLTFLQKLVSEQIKLRPKYRCQKCGYSSKKLYWQCPSCKNWGRIKPIRGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=380, Percent_Identity=46.0526315789474, Blast_Score=347, Evalue=8e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45191; Mature: 45191

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQELFFLLLPVAALYGWYMGVRSVHQKKQKKGNKLSRDYVQGLNFLLSDQPDKAVDHFIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LLEVDNETIETHLALGNLFRQRGEVERAIRIHQNLIARPSLTLEQRDLALLQLGKDFYQA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GLFDRSEETFVQLKASPEYQEVALENLLLIYQQLKEWKDAVRVTESLYKLSKGTKKRRTL
CCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SYLYCSLADQFKNPSDDKQKIKLYQKALTVFPNCMRANIALCDYYILQNKPQKALQILQS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IPELDIDFTEVILDRLLKLHQQQGSEQELIGYLYSIVSIGAGASAVILLAELIAKYHGIE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHH
KAQEFMLQELRRNTTMKGFNHLMTYHLQLAQSISEKESLTFLQKLVSEQIKLRPKYRCQK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
CGYSSKKLYWQCPSCKNWGRIKPIRGLDGE
CCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQELFFLLLPVAALYGWYMGVRSVHQKKQKKGNKLSRDYVQGLNFLLSDQPDKAVDHFIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LLEVDNETIETHLALGNLFRQRGEVERAIRIHQNLIARPSLTLEQRDLALLQLGKDFYQA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GLFDRSEETFVQLKASPEYQEVALENLLLIYQQLKEWKDAVRVTESLYKLSKGTKKRRTL
CCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SYLYCSLADQFKNPSDDKQKIKLYQKALTVFPNCMRANIALCDYYILQNKPQKALQILQS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IPELDIDFTEVILDRLLKLHQQQGSEQELIGYLYSIVSIGAGASAVILLAELIAKYHGIE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHH
KAQEFMLQELRRNTTMKGFNHLMTYHLQLAQSISEKESLTFLQKLVSEQIKLRPKYRCQK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
CGYSSKKLYWQCPSCKNWGRIKPIRGLDGE
CCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]