| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is maoC [C]
Identifier: 119946629
GI number: 119946629
Start: 3708724
End: 3709410
Strand: Reverse
Name: maoC [C]
Synonym: Ping_3008
Alternate gene names: 119946629
Gene position: 3709410-3708724 (Counterclockwise)
Preceding gene: 119946630
Following gene: 119946628
Centisome position: 81.35
GC content: 38.43
Gene sequence:
>687_bases ATGAAAAAGTTTGATATGAATAAATATAAAATTGAATTTATGGAAAAATTTGCCATTGACTTTAAAAAATGGATGTCTCC CTCTATTCGAGATTATTATTCATTATTTATTAAAAATGCCTATCACAATAAAAGCCAGCTCTTATTGTGGGTGAAAGAAT ATGCGGTGTTAGAAGATGGCCAGTCGGTCAATGTGGCGCAAAAACCGGTACAGTTGTTACCCGAGGTAAGGGAGCTGTTT TTCTCTTTGCAAAGTCAAATCGGAGAAGAAGTGCACGTCGGTGACTGGTTAACGGTTTCTCAACAGAGAATTGACCAGTT TGCTGATGTTACTGAAGATCATCAGTGGCTGCATAACGATGTTGAAAAGGCAAAAACGGATTCTCCTTTTAAAACAACCA TTGCCCATGGTTTTTTAACTTTGTCGCTATTACCGCGTTTAACCGATAGTGTGAATCCTACAAAGCCACTTTATCCAAAT GCAAAAATGATGGTTAATTATGGTCTTAACCAGGTTCGTTTCCCCTATCCGGTTAAAACAGGCAGTGTTATTCGAGCGCA TAGTCGCTTAATTAAAGTGACCCCAGTCAAGAGTGGTTTAGAAATAGAAAAAGAGATTTCCGTTGAAATAAAAAACACTC GCCGCCCGGGCTGTGTTGCGGTATCTGTGGTACGTGTTTATTTTTAA
Upstream 100 bases:
>100_bases GACAAATCCTGTTGAAGTATTAAAAAATATTAATGACAGTCTAGTTTGACGGTGTTGCGTGACAAGCACATATCTTCCAC CATTAACTTGGAATTGTTAA
Downstream 100 bases:
>100_bases ATTGGGTACGATGACAAAGAGAGCTTATATCCGTTACATTTTTCTGTTGAACAGCTTCTTTAGTACAGGGTTATATTGAC TTAAATCAAGAAAACCTCAA
Product: dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKKFDMNKYKIEFMEKFAIDFKKWMSPSIRDYYSLFIKNAYHNKSQLLLWVKEYAVLEDGQSVNVAQKPVQLLPEVRELF FSLQSQIGEEVHVGDWLTVSQQRIDQFADVTEDHQWLHNDVEKAKTDSPFKTTIAHGFLTLSLLPRLTDSVNPTKPLYPN AKMMVNYGLNQVRFPYPVKTGSVIRAHSRLIKVTPVKSGLEIEKEISVEIKNTRRPGCVAVSVVRVYF
Sequences:
>Translated_228_residues MKKFDMNKYKIEFMEKFAIDFKKWMSPSIRDYYSLFIKNAYHNKSQLLLWVKEYAVLEDGQSVNVAQKPVQLLPEVRELF FSLQSQIGEEVHVGDWLTVSQQRIDQFADVTEDHQWLHNDVEKAKTDSPFKTTIAHGFLTLSLLPRLTDSVNPTKPLYPN AKMMVNYGLNQVRFPYPVKTGSVIRAHSRLIKVTPVKSGLEIEKEISVEIKNTRRPGCVAVSVVRVYF >Mature_228_residues MKKFDMNKYKIEFMEKFAIDFKKWMSPSIRDYYSLFIKNAYHNKSQLLLWVKEYAVLEDGQSVNVAQKPVQLLPEVRELF FSLQSQIGEEVHVGDWLTVSQQRIDQFADVTEDHQWLHNDVEKAKTDSPFKTTIAHGFLTLSLLPRLTDSVNPTKPLYPN AKMMVNYGLNQVRFPYPVKTGSVIRAHSRLIKVTPVKSGLEIEKEISVEIKNTRRPGCVAVSVVRVYF
Specific function: May be involved in the hydration of fatty acids for production of polyhydroxylalkanoates [H]
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002539 [H]
Pfam domain/function: PF01575 MaoC_dehydratas [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 26427; Mature: 26427
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFDMNKYKIEFMEKFAIDFKKWMSPSIRDYYSLFIKNAYHNKSQLLLWVKEYAVLEDG CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHEEEHHHHHHHHCCC QSVNVAQKPVQLLPEVRELFFSLQSQIGEEVHVGDWLTVSQQRIDQFADVTEDHQWLHND CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHHHHCCCHHHHHHHHH VEKAKTDSPFKTTIAHGFLTLSLLPRLTDSVNPTKPLYPNAKMMVNYGLNQVRFPYPVKT HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEECCCCCCC GSVIRAHSRLIKVTPVKSGLEIEKEISVEIKNTRRPGCVAVSVVRVYF CCHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHEEHHCC >Mature Secondary Structure MKKFDMNKYKIEFMEKFAIDFKKWMSPSIRDYYSLFIKNAYHNKSQLLLWVKEYAVLEDG CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHEEEHHHHHHHHCCC QSVNVAQKPVQLLPEVRELFFSLQSQIGEEVHVGDWLTVSQQRIDQFADVTEDHQWLHND CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHHHHCCCHHHHHHHHH VEKAKTDSPFKTTIAHGFLTLSLLPRLTDSVNPTKPLYPNAKMMVNYGLNQVRFPYPVKT HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEECCCCCCC GSVIRAHSRLIKVTPVKSGLEIEKEISVEIKNTRRPGCVAVSVVRVYF CCHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]