| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946622
Identifier: 119946622
GI number: 119946622
Start: 3697785
End: 3699047
Strand: Direct
Name: 119946622
Synonym: Ping_3001
Alternate gene names: NA
Gene position: 3697785-3699047 (Clockwise)
Preceding gene: 119946619
Following gene: 119946624
Centisome position: 81.1
GC content: 40.22
Gene sequence:
>1263_bases ATGACAAATTTCAAACAAAAAGCGGCTATACGGATTGGCTGCGCAAGCCTGATATTGGCGATTATCTCCAGTGTTTTTGC CTGGTATATTTCTAAGGAAAACTTTGAAAAAAGTATTATTTCTTTGGCTTATGAAGAATCACACCGGTTAATCATGCATC ACAAGTCTATTGATCAAAAAAGTGATAATGGAGAAACAGTTATTCAGCAAGGCGTGCAAACGTTAACGGGGGGATTGTTT GATATTGCTGAAATATATGATGTGAATGGCAAAAAGCTGGCTGAATCATTAACAGCTGAAGGCAAAAAAATAGAAGATCA ACTTCCAGAGCATGTCTTCCTCAATACAAATAAATCTGAATATGAAAGTGTTACTTTAGCCAATGGAGAATGGGTTTTAA CTGTATTTGTTCCTTTGCATTCATTAACAGAAACAAAACTCAATACCGATTTGGGTTATTTAGAAGGGGTGAGAATTGTT CCCGAATGGCAAAAAAAACAGATCTTCCAAAATTCTTTTATTGTATCAATGCTTGTCAGTCTTGCAGCCTTATTGTGCGG AATGATCATCTATCCAATCGTTGTAAGCCTGTCCAAGGAAAATGAAAATAAAACACTAGAGATACTAAACTCGCACATTG CAATGATGGAATCTTTGGGCCGCGCGATCGCAAAGCGGGATTCTGATACGGGTGCTCATAATTATCGTGTCGCCTGGATA GCGGCAAAGCTTGGTGAAGAAGTGGGTTTATCTGGAGGTAAAATGCAGTCTTTGATTGCCGGAAGCTTCCTGCATGATGT CGGAAAAATTGGTATCCCCGATGCGATTTTATTAAAGCCGGGTAAACTTTCAGAGTCAGAATTTGCAGTGATACGTACTC ATGTTCAACAAGGCGAAGAAATCGTCATGGGGATGGGCTGGTTAGATGGCGCTAATGAAGTCGTTTCGGCTCATCATGAA AAGTGGGATGGCAGCGGCTATCCTAGAGCATTAAAACATGAAGAAATCCCTTTATCAGCACGCATTTTTGCAATAGCGGA TGTCTTTGATGCCCTTTCTTCAAAACGCCCCTATAAAGAGCCGATGCCTTACGAAAAGGTGATGGATATTCTTAAGAAAG ATACAGGCTCTCATTTTGACGCAACGCTAATGCGCCTTTTTGTTCCCATGTCCAAAGGTATCTCAGAGAAATTAAATGGC TTAAATGAAGATAAGGTGCGAGAACTACTTGAAGAGCGGGTACGTCAGCATTTCTATACCTGA
Upstream 100 bases:
>100_bases TTCACAATAAAATAATTCATCGAAGTAAAAGAAAATTTAAAGCGTATCCTAGGTTCCGTTGATAAAAAGTTAATGGAATC CAAATGGGAAGGATCGCAGT
Downstream 100 bases:
>100_bases AGTTTTTAGCAGTGGCGGAAGTAAAGAATAGCTGCCGCACAGCAGCACTTCCCCTTCTTGAACCCGCCGTCAAGGGCGGA ATACAAACAAAAAAAGTTAC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTNFKQKAAIRIGCASLILAIISSVFAWYISKENFEKSIISLAYEESHRLIMHHKSIDQKSDNGETVIQQGVQTLTGGLF DIAEIYDVNGKKLAESLTAEGKKIEDQLPEHVFLNTNKSEYESVTLANGEWVLTVFVPLHSLTETKLNTDLGYLEGVRIV PEWQKKQIFQNSFIVSMLVSLAALLCGMIIYPIVVSLSKENENKTLEILNSHIAMMESLGRAIAKRDSDTGAHNYRVAWI AAKLGEEVGLSGGKMQSLIAGSFLHDVGKIGIPDAILLKPGKLSESEFAVIRTHVQQGEEIVMGMGWLDGANEVVSAHHE KWDGSGYPRALKHEEIPLSARIFAIADVFDALSSKRPYKEPMPYEKVMDILKKDTGSHFDATLMRLFVPMSKGISEKLNG LNEDKVRELLEERVRQHFYT
Sequences:
>Translated_420_residues MTNFKQKAAIRIGCASLILAIISSVFAWYISKENFEKSIISLAYEESHRLIMHHKSIDQKSDNGETVIQQGVQTLTGGLF DIAEIYDVNGKKLAESLTAEGKKIEDQLPEHVFLNTNKSEYESVTLANGEWVLTVFVPLHSLTETKLNTDLGYLEGVRIV PEWQKKQIFQNSFIVSMLVSLAALLCGMIIYPIVVSLSKENENKTLEILNSHIAMMESLGRAIAKRDSDTGAHNYRVAWI AAKLGEEVGLSGGKMQSLIAGSFLHDVGKIGIPDAILLKPGKLSESEFAVIRTHVQQGEEIVMGMGWLDGANEVVSAHHE KWDGSGYPRALKHEEIPLSARIFAIADVFDALSSKRPYKEPMPYEKVMDILKKDTGSHFDATLMRLFVPMSKGISEKLNG LNEDKVRELLEERVRQHFYT >Mature_419_residues TNFKQKAAIRIGCASLILAIISSVFAWYISKENFEKSIISLAYEESHRLIMHHKSIDQKSDNGETVIQQGVQTLTGGLFD IAEIYDVNGKKLAESLTAEGKKIEDQLPEHVFLNTNKSEYESVTLANGEWVLTVFVPLHSLTETKLNTDLGYLEGVRIVP EWQKKQIFQNSFIVSMLVSLAALLCGMIIYPIVVSLSKENENKTLEILNSHIAMMESLGRAIAKRDSDTGAHNYRVAWIA AKLGEEVGLSGGKMQSLIAGSFLHDVGKIGIPDAILLKPGKLSESEFAVIRTHVQQGEEIVMGMGWLDGANEVVSAHHEK WDGSGYPRALKHEEIPLSARIFAIADVFDALSSKRPYKEPMPYEKVMDILKKDTGSHFDATLMRLFVPMSKGISEKLNGL NEDKVRELLEERVRQHFYT
Specific function: Unknown
COG id: COG3437
COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46890; Mature: 46758
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFKQKAAIRIGCASLILAIISSVFAWYISKENFEKSIISLAYEESHRLIMHHKSIDQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCC SDNGETVIQQGVQTLTGGLFDIAEIYDVNGKKLAESLTAEGKKIEDQLPEHVFLNTNKSE CCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCEEECCCCHH YESVTLANGEWVLTVFVPLHSLTETKLNTDLGYLEGVRIVPEWQKKQIFQNSFIVSMLVS HCEEEEECCCEEEEEEEHHHHHHHHHHCCCCHHHCCCEECCCHHHHHHHHHHHHHHHHHH LAALLCGMIIYPIVVSLSKENENKTLEILNSHIAMMESLGRAIAKRDSDTGAHNYRVAWI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEH AAKLGEEVGLSGGKMQSLIAGSFLHDVGKIGIPDAILLKPGKLSESEFAVIRTHVQQGEE HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCE IVMGMGWLDGANEVVSAHHEKWDGSGYPRALKHEEIPLSARIFAIADVFDALSSKRPYKE EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PMPYEKVMDILKKDTGSHFDATLMRLFVPMSKGISEKLNGLNEDKVRELLEERVRQHFYT CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNFKQKAAIRIGCASLILAIISSVFAWYISKENFEKSIISLAYEESHRLIMHHKSIDQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCC SDNGETVIQQGVQTLTGGLFDIAEIYDVNGKKLAESLTAEGKKIEDQLPEHVFLNTNKSE CCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCEEECCCCHH YESVTLANGEWVLTVFVPLHSLTETKLNTDLGYLEGVRIVPEWQKKQIFQNSFIVSMLVS HCEEEEECCCEEEEEEEHHHHHHHHHHCCCCHHHCCCEECCCHHHHHHHHHHHHHHHHHH LAALLCGMIIYPIVVSLSKENENKTLEILNSHIAMMESLGRAIAKRDSDTGAHNYRVAWI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEH AAKLGEEVGLSGGKMQSLIAGSFLHDVGKIGIPDAILLKPGKLSESEFAVIRTHVQQGEE HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCE IVMGMGWLDGANEVVSAHHEKWDGSGYPRALKHEEIPLSARIFAIADVFDALSSKRPYKE EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PMPYEKVMDILKKDTGSHFDATLMRLFVPMSKGISEKLNGLNEDKVRELLEERVRQHFYT CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]