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The map label for this gene is ureD [H]

Identifier: 119946612

GI number: 119946612

Start: 3689518

End: 3690459

Strand: Direct

Name: ureD [H]

Synonym: Ping_2991

Alternate gene names: 119946612

Gene position: 3689518-3690459 (Clockwise)

Preceding gene: 119946611

Following gene: 119946613

Centisome position: 80.92

GC content: 45.44

Gene sequence:

>942_bases
ATGATTAATTTAAGCATGTTAAGCACTGTCATAACAAAACCGCCGATCACAGCAAAGCCAAAAAACCAATGGCTGGCGCA
TTTAATGCTGGAATTTAGCGACACTCCGGTCGGTACGCAGCTGACCCGCACCAAACGTAAAGGGCCGCTGTCAGTGCAGA
AAGCGTTTTATCCTGAGGGGCCTGACTGCGCGCATATTTATCTGCTACATCCACCCGCGGGAATAGTCTCCGGGGATGAG
CTGCGGATTGGCATTGACGTAAAAAAAAATGCCCATTTGTTATTTACCACCCCAGGGGCCGGACGTTTTTACCGCGCCCG
TGAAGATCTCACTATTGGGGATTCTCAGCAGACTCAAATCACTCAATTTGACCTTGAGGCGCAGGCAAAATGTGAAAATT
TTCCGCAGGAAACCATCGTTTATGAAGGTGCCGACGGCTTTAATAGCGTGGATATAAACTTAACATCGACAAGTGTTTAT
CTCGGTTGGGATATCACTTGCCTGGGGCTGCCTAATTCAGATCAAACCTTTATTAAGGGAAAATACTGTCAGTTAAACCG
CCTGTTTTGTGACGCTAAACTTATTTATCATGATCGTATTAGTCTGTCACCAAGCAATAATTTATTGGCGCACCCGGCAG
GTCTCGCGGGCAACACGGTTTTTGCGACATTTTTAGCCTATGCCCCTATCTTGCACAATAACCCTGAGCATTCCAATAAA
CCCCAGCAGCATAAAGCCTTAGTGATGCAGATTCGAGCAAAAATAACAGCAGAAAGTGCCCAGGAAAAAGTCAGTATTAC
GGAAATTAACGGTTTATTAGTGATCCGTTATTTAGGGCATCACGCTCAGGAGTGCAAGCAGTTATTTATCAGCTTATGGC
AACTATTGCGACCTTTATTATTGAATAAAACGGCGGTGCAACCGCGAATTTGGCACACCTGA

Upstream 100 bases:

>100_bases
GGGGAAATGCAGGAACTAACAGATCAGCTGGTGGGTAAATACTTAGCGGTATAAATAAGCTTAGATCGGGATAGGCAAAC
CGAATAAAGGTTAAATAAGG

Downstream 100 bases:

>100_bases
CTGGTACTCATAACTGACACACATAAAAAGAGATTATTATGGACTTATTACCTCGAGAAAAAGACAAGTTACTGATTTTC
ACCGCCGCGTTACTTGCAGA

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MINLSMLSTVITKPPITAKPKNQWLAHLMLEFSDTPVGTQLTRTKRKGPLSVQKAFYPEGPDCAHIYLLHPPAGIVSGDE
LRIGIDVKKNAHLLFTTPGAGRFYRAREDLTIGDSQQTQITQFDLEAQAKCENFPQETIVYEGADGFNSVDINLTSTSVY
LGWDITCLGLPNSDQTFIKGKYCQLNRLFCDAKLIYHDRISLSPSNNLLAHPAGLAGNTVFATFLAYAPILHNNPEHSNK
PQQHKALVMQIRAKITAESAQEKVSITEINGLLVIRYLGHHAQECKQLFISLWQLLRPLLLNKTAVQPRIWHT

Sequences:

>Translated_313_residues
MINLSMLSTVITKPPITAKPKNQWLAHLMLEFSDTPVGTQLTRTKRKGPLSVQKAFYPEGPDCAHIYLLHPPAGIVSGDE
LRIGIDVKKNAHLLFTTPGAGRFYRAREDLTIGDSQQTQITQFDLEAQAKCENFPQETIVYEGADGFNSVDINLTSTSVY
LGWDITCLGLPNSDQTFIKGKYCQLNRLFCDAKLIYHDRISLSPSNNLLAHPAGLAGNTVFATFLAYAPILHNNPEHSNK
PQQHKALVMQIRAKITAESAQEKVSITEINGLLVIRYLGHHAQECKQLFISLWQLLRPLLLNKTAVQPRIWHT
>Mature_313_residues
MINLSMLSTVITKPPITAKPKNQWLAHLMLEFSDTPVGTQLTRTKRKGPLSVQKAFYPEGPDCAHIYLLHPPAGIVSGDE
LRIGIDVKKNAHLLFTTPGAGRFYRAREDLTIGDSQQTQITQFDLEAQAKCENFPQETIVYEGADGFNSVDINLTSTSVY
LGWDITCLGLPNSDQTFIKGKYCQLNRLFCDAKLIYHDRISLSPSNNLLAHPAGLAGNTVFATFLAYAPILHNNPEHSNK
PQQHKALVMQIRAKITAESAQEKVSITEINGLLVIRYLGHHAQECKQLFISLWQLLRPLLLNKTAVQPRIWHT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 34979; Mature: 34979

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLSMLSTVITKPPITAKPKNQWLAHLMLEFSDTPVGTQLTRTKRKGPLSVQKAFYPEG
CEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHCCCCC
PDCAHIYLLHPPAGIVSGDELRIGIDVKKNAHLLFTTPGAGRFYRAREDLTIGDSQQTQI
CCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCCCEE
TQFDLEAQAKCENFPQETIVYEGADGFNSVDINLTSTSVYLGWDITCLGLPNSDQTFIKG
EEECCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEC
KYCQLNRLFCDAKLIYHDRISLSPSNNLLAHPAGLAGNTVFATFLAYAPILHNNPEHSNK
CEEEEEEEEEEEEEEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PQQHKALVMQIRAKITAESAQEKVSITEINGLLVIRYLGHHAQECKQLFISLWQLLRPLL
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEHHCCCHHHHHHHHHHHHHHHHHHH
LNKTAVQPRIWHT
HCCCCCCCCCCCC
>Mature Secondary Structure
MINLSMLSTVITKPPITAKPKNQWLAHLMLEFSDTPVGTQLTRTKRKGPLSVQKAFYPEG
CEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHCCCCC
PDCAHIYLLHPPAGIVSGDELRIGIDVKKNAHLLFTTPGAGRFYRAREDLTIGDSQQTQI
CCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCCCEE
TQFDLEAQAKCENFPQETIVYEGADGFNSVDINLTSTSVYLGWDITCLGLPNSDQTFIKG
EEECCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEC
KYCQLNRLFCDAKLIYHDRISLSPSNNLLAHPAGLAGNTVFATFLAYAPILHNNPEHSNK
CEEEEEEEEEEEEEEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PQQHKALVMQIRAKITAESAQEKVSITEINGLLVIRYLGHHAQECKQLFISLWQLLRPLL
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEHHCCCHHHHHHHHHHHHHHHHHHH
LNKTAVQPRIWHT
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA