| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ureA
Identifier: 119946613
GI number: 119946613
Start: 3690498
End: 3690800
Strand: Direct
Name: ureA
Synonym: Ping_2992
Alternate gene names: 119946613
Gene position: 3690498-3690800 (Clockwise)
Preceding gene: 119946612
Following gene: 119946614
Centisome position: 80.94
GC content: 45.87
Gene sequence:
>303_bases ATGGACTTATTACCTCGAGAAAAAGACAAGTTACTGATTTTCACCGCCGCGTTACTTGCAGAACGACGTTTAAATCGCGG TTTAAAACTCAATTATCCCGAAGCCATGGCCTATATCTCCATGGAGATTATTGAAGGTGCGCGTGACGGAAAAAGCGTGG CGGAAATGATGGATTATGGCCGTACTTTACTGACCCGCGATCAGGTAATGGATGGCATCGCCGAGCTGATTCCCGATGTA CAGGTTGAAGCCACTTTTGTCGATGGCACTAAGCTTGTGACTGTGCATAACCCGATTATTTAA
Upstream 100 bases:
>100_bases AACTATTGCGACCTTTATTATTGAATAAAACGGCGGTGCAACCGCGAATTTGGCACACCTGACTGGTACTCATAACTGAC ACACATAAAAAGAGATTATT
Downstream 100 bases:
>100_bases CACGGCGATTGGCTATCAGCTATCAGCTGCGAGCTTTCGAGCTTCGAGCCTTCGAGCTTCGAGCCTTCGAGCTTCGAGCT TCGAGTTGCGGGCTGACGGC
Product: urease subunit gamma
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDLLPREKDKLLIFTAALLAERRLNRGLKLNYPEAMAYISMEIIEGARDGKSVAEMMDYGRTLLTRDQVMDGIAELIPDV QVEATFVDGTKLVTVHNPII
Sequences:
>Translated_100_residues MDLLPREKDKLLIFTAALLAERRLNRGLKLNYPEAMAYISMEIIEGARDGKSVAEMMDYGRTLLTRDQVMDGIAELIPDV QVEATFVDGTKLVTVHNPII >Mature_100_residues MDLLPREKDKLLIFTAALLAERRLNRGLKLNYPEAMAYISMEIIEGARDGKSVAEMMDYGRTLLTRDQVMDGIAELIPDV QVEATFVDGTKLVTVHNPII
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease gamma subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE3_PSYIN (A1SYX9)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944293.1 - ProteinModelPortal: A1SYX9 - SMR: A1SYX9 - STRING: A1SYX9 - GeneID: 4623683 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2992 - eggNOG: COG0831 - HOGENOM: HBG286300 - OMA: YPEAVAY - ProtClustDB: PRK13241 - BioCyc: PING357804:PING_2992-MONOMER - GO: GO:0005737 - HAMAP: MF_00739 - InterPro: IPR002026 - InterPro: IPR012010 - Gene3D: G3DSA:3.30.280.10 - PIRSF: PIRSF001223 - ProDom: PD002319 - TIGRFAMs: TIGR00193
Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg
EC number: =3.5.1.5
Molecular weight: Translated: 11234; Mature: 11234
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLPREKDKLLIFTAALLAERRLNRGLKLNYPEAMAYISMEIIEGARDGKSVAEMMDYG CCCCCCCCCCEEHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHC RTLLTRDQVMDGIAELIPDVQVEATFVDGTKLVTVHNPII HHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCC >Mature Secondary Structure MDLLPREKDKLLIFTAALLAERRLNRGLKLNYPEAMAYISMEIIEGARDGKSVAEMMDYG CCCCCCCCCCEEHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHC RTLLTRDQVMDGIAELIPDVQVEATFVDGTKLVTVHNPII HHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA