| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946601
Identifier: 119946601
GI number: 119946601
Start: 3674047
End: 3674643
Strand: Reverse
Name: 119946601
Synonym: Ping_2980
Alternate gene names: NA
Gene position: 3674643-3674047 (Counterclockwise)
Preceding gene: 119946602
Following gene: 119946600
Centisome position: 80.59
GC content: 42.38
Gene sequence:
>597_bases ATGGATACCTACTACCCCTTGCTGATTACATCCGCCATGCTTTTGTTGCCATTAATTCCAGCAGCGATTATTTATCTTCT TCTCACTCCTCGAAATAAAAAAAATATAAATGAAGCAAAAGGAGAATACGAGGGGCAATTTCTCAGTTTGGGAAAAATTC GGGTTGAGTTTAATGTTTTTGGATCGACAGCGACCTATGCGTTAGTGCTTTTTGCCGCGTATTACATGCATAGCGATATG GAGTTACAAAAAATACAGAGACTGTCAATGCAAGACCAGCAGGCTTGGTTGGTTGAGGTTCCTGTGAGGCTAAAAGATTC TAATGGCAAACCTCTTCAAGCTAATAATGAAGAGATGCAGCAGGTTATGGTGACCCTGGAACCGGGCAATATTGAAGCGT CAGCCAGTATGCTACAGTTTTGGGTGGTGCCCGATAAAGGACGATTCCCTACTGCAAATTTCTCTATGCCGGGGGCCCGA AATCGCGTAACACTTGATCTTAACGATAAAAAAATTATTGCCCACAAATATGGTGCTAGAAAAATGGAAGGCATTGTGCC TGTTTGGCTTGATTTTGGAGAGGCATATGGGCATTAA
Upstream 100 bases:
>100_bases TTGAAAAAGAGGGCACATTATTGAGTGGTATCTAAAAGCTTTAAGCCCTTTTTCAAAGCAATTATTACAGCGATAGTCTG ATAGCGAATAGGAAAGATTA
Downstream 100 bases:
>100_bases CACTATAAAATGGTTAACAGGTAAAGCTATCTTGTCACTTTCTGCTTTATTATTGCTTACTTCGATGGCGGCTCATGCAA CCGATGTTAGAGGACGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDTYYPLLITSAMLLLPLIPAAIIYLLLTPRNKKNINEAKGEYEGQFLSLGKIRVEFNVFGSTATYALVLFAAYYMHSDM ELQKIQRLSMQDQQAWLVEVPVRLKDSNGKPLQANNEEMQQVMVTLEPGNIEASASMLQFWVVPDKGRFPTANFSMPGAR NRVTLDLNDKKIIAHKYGARKMEGIVPVWLDFGEAYGH
Sequences:
>Translated_198_residues MDTYYPLLITSAMLLLPLIPAAIIYLLLTPRNKKNINEAKGEYEGQFLSLGKIRVEFNVFGSTATYALVLFAAYYMHSDM ELQKIQRLSMQDQQAWLVEVPVRLKDSNGKPLQANNEEMQQVMVTLEPGNIEASASMLQFWVVPDKGRFPTANFSMPGAR NRVTLDLNDKKIIAHKYGARKMEGIVPVWLDFGEAYGH >Mature_198_residues MDTYYPLLITSAMLLLPLIPAAIIYLLLTPRNKKNINEAKGEYEGQFLSLGKIRVEFNVFGSTATYALVLFAAYYMHSDM ELQKIQRLSMQDQQAWLVEVPVRLKDSNGKPLQANNEEMQQVMVTLEPGNIEASASMLQFWVVPDKGRFPTANFSMPGAR NRVTLDLNDKKIIAHKYGARKMEGIVPVWLDFGEAYGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22430; Mature: 22430
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTYYPLLITSAMLLLPLIPAAIIYLLLTPRNKKNINEAKGEYEGQFLSLGKIRVEFNVF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEC GSTATYALVLFAAYYMHSDMELQKIQRLSMQDQQAWLVEVPVRLKDSNGKPLQANNEEMQ CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHE QVMVTLEPGNIEASASMLQFWVVPDKGRFPTANFSMPGARNRVTLDLNDKKIIAHKYGAR EEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCH KMEGIVPVWLDFGEAYGH HHCCCEEEEEECHHHHCC >Mature Secondary Structure MDTYYPLLITSAMLLLPLIPAAIIYLLLTPRNKKNINEAKGEYEGQFLSLGKIRVEFNVF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEC GSTATYALVLFAAYYMHSDMELQKIQRLSMQDQQAWLVEVPVRLKDSNGKPLQANNEEMQ CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHE QVMVTLEPGNIEASASMLQFWVVPDKGRFPTANFSMPGARNRVTLDLNDKKIIAHKYGAR EEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCH KMEGIVPVWLDFGEAYGH HHCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA