| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946602
Identifier: 119946602
GI number: 119946602
Start: 3675154
End: 3675606
Strand: Reverse
Name: 119946602
Synonym: Ping_2981
Alternate gene names: NA
Gene position: 3675606-3675154 (Counterclockwise)
Preceding gene: 119946604
Following gene: 119946601
Centisome position: 80.61
GC content: 40.18
Gene sequence:
>453_bases ATGAAAACTATATTAATAGTATTCTCATTGGCATTAGGACTAATATACCCCCCCCTTTCATTGGCAGAAGGAGATTTAAG CCGCGCGAATGTCATCACCCTTAAATTAGAAATGGGTAGCAATACAAAGGGCATGTACTTTTTACCCAACGAGTTCAATT TAGTCACCGGACAGGCGTATAAAATTGTTCTGGCGAATACGGATGCAATTAAACATGAATTTGAATCCGTTGAATTTGTT GAAAAGATATTCACCCGTAAAGTTGAACTAGTTACTCAAAAAGGAGATTTTTTGGCGGAGGTTAAAGGTCATATCAGTGA GATTGAAGTCGGTCCTCATGCTTCGATAGAGTGGTATTTTGTGCCCGTACAAACCGGTGCTAATATCGAAATGGTCTGCG CGCTTCCCGGGCACAAAGAAGCTGGCATGTTGGGGTTGATTAATATCAATTAA
Upstream 100 bases:
>100_bases TTAAAAATAAATTTATTAACCTGAAAAGCTTTGGTTGTTCTTTTTTTAATCAATAAGTAAATCGGTTCGCTAATTTTAAT TACTAGATAAGGAAGTTACG
Downstream 100 bases:
>100_bases ACAGAGGATAAAGGAGAGTAAACCACTGCCGTTGATTAGAACTCCGCGACTTTTTTTACTCTTTAATACCCTTTTTTATT GTCCAATAATCTGCACAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKTILIVFSLALGLIYPPLSLAEGDLSRANVITLKLEMGSNTKGMYFLPNEFNLVTGQAYKIVLANTDAIKHEFESVEFV EKIFTRKVELVTQKGDFLAEVKGHISEIEVGPHASIEWYFVPVQTGANIEMVCALPGHKEAGMLGLININ
Sequences:
>Translated_150_residues MKTILIVFSLALGLIYPPLSLAEGDLSRANVITLKLEMGSNTKGMYFLPNEFNLVTGQAYKIVLANTDAIKHEFESVEFV EKIFTRKVELVTQKGDFLAEVKGHISEIEVGPHASIEWYFVPVQTGANIEMVCALPGHKEAGMLGLININ >Mature_150_residues MKTILIVFSLALGLIYPPLSLAEGDLSRANVITLKLEMGSNTKGMYFLPNEFNLVTGQAYKIVLANTDAIKHEFESVEFV EKIFTRKVELVTQKGDFLAEVKGHISEIEVGPHASIEWYFVPVQTGANIEMVCALPGHKEAGMLGLININ
Specific function: Unknown
COG id: COG4454
COG function: function code P; Uncharacterized copper-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16538; Mature: 16538
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILIVFSLALGLIYPPLSLAEGDLSRANVITLKLEMGSNTKGMYFLPNEFNLVTGQAY CCEEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCEEEECCEE KIVLANTDAIKHEFESVEFVEKIFTRKVELVTQKGDFLAEVKGHISEIEVGPHASIEWYF EEEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHHHCCCEEEECCCCCCEEEEE VPVQTGANIEMVCALPGHKEAGMLGLININ EEEECCCCEEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure MKTILIVFSLALGLIYPPLSLAEGDLSRANVITLKLEMGSNTKGMYFLPNEFNLVTGQAY CCEEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCEEEECCEE KIVLANTDAIKHEFESVEFVEKIFTRKVELVTQKGDFLAEVKGHISEIEVGPHASIEWYF EEEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHHHCCCEEEECCCCCCEEEEE VPVQTGANIEMVCALPGHKEAGMLGLININ EEEECCCCEEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA