| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946563
Identifier: 119946563
GI number: 119946563
Start: 3626840
End: 3627541
Strand: Reverse
Name: 119946563
Synonym: Ping_2942
Alternate gene names: NA
Gene position: 3627541-3626840 (Counterclockwise)
Preceding gene: 119946564
Following gene: 119946562
Centisome position: 79.56
GC content: 40.88
Gene sequence:
>702_bases ATGAGTGAGTGGTACGACAATCAAAAAAAGCCAGCTAGTAACTTTCGGAAGTTACTGCAAGAGCGTTTAGATAAAGTAAA TCCACGTCGAAAACTGTCAGCTGAAGAAGAAAAACGATTATCTAAACTCGAAGCAATAGCTGTTAAGTTAAAGCGTGGAG ATAACGTGCAAAACCGTCAACTGCAGACGTGGCTAAGTGTAGATGAATACGAACAGATAGCTGCTGAATGGGACACGCAA AAGCTGTTTAGAGAAGAGCTTAAAGATAAGCCAAGTGAGCTAAAACGATACGAGGACAAGTTGAAAGAAGCGATTATGAT GCGTAATCGTTCTGATGCGTGCCATCGAAAGGGTAAGAAGTCTGCAGCATATAAGTTGGATGGCAAATGCGAAAGCTTAT GTGAAGATGCACTAGAGATACTTCAAGAAATTGTTGCTGCTGATGCTAGCTTACAGATTTGGTTTGATAGGCACTTGGAC TTTGGACACGGTAGTTTAATTGATGCAAGTCTTGGCAACTTACCGCGCTTGGTTACATCACGCAGTATAGAGAAGCTGAG TGACGATAGTCGTCTAGTGAAGAAGATTGACGTAAAAATAAGTGTTGTTGAATGTGCAATTTATAGTATCGGTAGAGACA CAACAGTATCGTCCAAAGGTGATAGGCTTATGCTAGAAAAGTTTCTGAACACTGACGACTAA
Upstream 100 bases:
>100_bases CACATCATGCTAATGCTAATGGACGTGAAATTAGAACTTCTGAATTACTTTTGCTAATGCAAAATCGTTAGTGAGTAGTA ATGATTGAAGTGCTTGATAG
Downstream 100 bases:
>100_bases TCTTCGGATGACAGCCACCTAACTCTGAAAGCACAATGCTTAGAGCTAACAAGGAGGCTGTTATGACTGTACTTGATACA CTGAATTTCGTTGCATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSEWYDNQKKPASNFRKLLQERLDKVNPRRKLSAEEEKRLSKLEAIAVKLKRGDNVQNRQLQTWLSVDEYEQIAAEWDTQ KLFREELKDKPSELKRYEDKLKEAIMMRNRSDACHRKGKKSAAYKLDGKCESLCEDALEILQEIVAADASLQIWFDRHLD FGHGSLIDASLGNLPRLVTSRSIEKLSDDSRLVKKIDVKISVVECAIYSIGRDTTVSSKGDRLMLEKFLNTDD
Sequences:
>Translated_233_residues MSEWYDNQKKPASNFRKLLQERLDKVNPRRKLSAEEEKRLSKLEAIAVKLKRGDNVQNRQLQTWLSVDEYEQIAAEWDTQ KLFREELKDKPSELKRYEDKLKEAIMMRNRSDACHRKGKKSAAYKLDGKCESLCEDALEILQEIVAADASLQIWFDRHLD FGHGSLIDASLGNLPRLVTSRSIEKLSDDSRLVKKIDVKISVVECAIYSIGRDTTVSSKGDRLMLEKFLNTDD >Mature_232_residues SEWYDNQKKPASNFRKLLQERLDKVNPRRKLSAEEEKRLSKLEAIAVKLKRGDNVQNRQLQTWLSVDEYEQIAAEWDTQK LFREELKDKPSELKRYEDKLKEAIMMRNRSDACHRKGKKSAAYKLDGKCESLCEDALEILQEIVAADASLQIWFDRHLDF GHGSLIDASLGNLPRLVTSRSIEKLSDDSRLVKKIDVKISVVECAIYSIGRDTTVSSKGDRLMLEKFLNTDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26949; Mature: 26818
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEWYDNQKKPASNFRKLLQERLDKVNPRRKLSAEEEKRLSKLEAIAVKLKRGDNVQNRQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH LQTWLSVDEYEQIAAEWDTQKLFREELKDKPSELKRYEDKLKEAIMMRNRSDACHRKGKK HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC SAAYKLDGKCESLCEDALEILQEIVAADASLQIWFDRHLDFGHGSLIDASLGNLPRLVTS CCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHH RSIEKLSDDSRLVKKIDVKISVVECAIYSIGRDTTVSSKGDRLMLEKFLNTDD HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure SEWYDNQKKPASNFRKLLQERLDKVNPRRKLSAEEEKRLSKLEAIAVKLKRGDNVQNRQ CCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH LQTWLSVDEYEQIAAEWDTQKLFREELKDKPSELKRYEDKLKEAIMMRNRSDACHRKGKK HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC SAAYKLDGKCESLCEDALEILQEIVAADASLQIWFDRHLDFGHGSLIDASLGNLPRLVTS CCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHH RSIEKLSDDSRLVKKIDVKISVVECAIYSIGRDTTVSSKGDRLMLEKFLNTDD HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA