| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946564
Identifier: 119946564
GI number: 119946564
Start: 3627571
End: 3628473
Strand: Reverse
Name: 119946564
Synonym: Ping_2943
Alternate gene names: NA
Gene position: 3628473-3627571 (Counterclockwise)
Preceding gene: 119946565
Following gene: 119946563
Centisome position: 79.58
GC content: 37.54
Gene sequence:
>903_bases ATGGGCAACGTTAATCGTGTTATCTTTTGGGTTTTTATACCTAGTGTCCTTCTTTTTTACATCGTATTTAGGGTTGTCGA GTGGCAAAACTATGATGATGGAGGGCGTCAATTAATTTCTGAGCAGCATGCTTTAAATTTGAGTGTCAGAGATGACATAG ACTGCCTCATATTAGGAGGCTCAAATGCAGTATTCAGTTTAAGTGCGGAGCAAATGTCAAATCAAAGTAACTTAACTTGC TACAATCTTAGTTTGCTTAATGAAGGTTTTTCGGATGGTGCATACTTTGATTTCATACGCAATCTAGCTATAGAAAGAAC GCAAATTAAAAGCATCTTTTATAGTTCTGTCATTCCTCTTACAAACACAGTTTTTTTGGACAGGTTAGAGTCAAATCAGA GCCAGATTGGCATCAGTGGTGACGGTCGAGTAAAATTTCAATTCACTGGACGTTCGCTAGCAAGCTACTTAAAAGATTTT TTACAAGATAAGCCTCCGTTTCAGAGTTTGCAATATCCAATGCCCACACCTAGTGGTGATTTTAATTTTGATGAGTTCGA TGGTTGCCAACGAGAAAAAATACGTGACGAATGGATTCCAGTAACAATTGACGAAGATTTCAAGCAGTGGCTTGGCGATA ATCTTTTGACAGTTAGTACTTTATTTCCAAACGCTAATATATCATTTGTTTTGCCATCTACGCTCAGAAGTCAATTAAGT GAAGATGACATTGGAAAATTCTCAGACACGTTAGAGTCAGAAGTGGTTAGTAATTCTGCACACTATATTGCTCAATCTAC GTTCTCAGACGTCAGTGTACTTTGCGATGGGACACATCATGCTAATGCTAATGGACGTGAAATTAGAACTTCTGAATTAC TTTTGCTAATGCAAAATCGTTAG
Upstream 100 bases:
>100_bases AAGAGGAATTACAAGTTCCTGCGAACTCCAATGTCATTATTTATTTTATGTACGCTTGGTATTTTGTTCGCATCAAATGT AGGGGTGGATTATGCTGTAT
Downstream 100 bases:
>100_bases TGAGTAGTAATGATTGAAGTGCTTGATAGATGAGTGAGTGGTACGACAATCAAAAAAAGCCAGCTAGTAACTTTCGGAAG TTACTGCAAGAGCGTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MGNVNRVIFWVFIPSVLLFYIVFRVVEWQNYDDGGRQLISEQHALNLSVRDDIDCLILGGSNAVFSLSAEQMSNQSNLTC YNLSLLNEGFSDGAYFDFIRNLAIERTQIKSIFYSSVIPLTNTVFLDRLESNQSQIGISGDGRVKFQFTGRSLASYLKDF LQDKPPFQSLQYPMPTPSGDFNFDEFDGCQREKIRDEWIPVTIDEDFKQWLGDNLLTVSTLFPNANISFVLPSTLRSQLS EDDIGKFSDTLESEVVSNSAHYIAQSTFSDVSVLCDGTHHANANGREIRTSELLLLMQNR
Sequences:
>Translated_300_residues MGNVNRVIFWVFIPSVLLFYIVFRVVEWQNYDDGGRQLISEQHALNLSVRDDIDCLILGGSNAVFSLSAEQMSNQSNLTC YNLSLLNEGFSDGAYFDFIRNLAIERTQIKSIFYSSVIPLTNTVFLDRLESNQSQIGISGDGRVKFQFTGRSLASYLKDF LQDKPPFQSLQYPMPTPSGDFNFDEFDGCQREKIRDEWIPVTIDEDFKQWLGDNLLTVSTLFPNANISFVLPSTLRSQLS EDDIGKFSDTLESEVVSNSAHYIAQSTFSDVSVLCDGTHHANANGREIRTSELLLLMQNR >Mature_299_residues GNVNRVIFWVFIPSVLLFYIVFRVVEWQNYDDGGRQLISEQHALNLSVRDDIDCLILGGSNAVFSLSAEQMSNQSNLTCY NLSLLNEGFSDGAYFDFIRNLAIERTQIKSIFYSSVIPLTNTVFLDRLESNQSQIGISGDGRVKFQFTGRSLASYLKDFL QDKPPFQSLQYPMPTPSGDFNFDEFDGCQREKIRDEWIPVTIDEDFKQWLGDNLLTVSTLFPNANISFVLPSTLRSQLSE DDIGKFSDTLESEVVSNSAHYIAQSTFSDVSVLCDGTHHANANGREIRTSELLLLMQNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33969; Mature: 33838
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVNRVIFWVFIPSVLLFYIVFRVVEWQNYDDGGRQLISEQHALNLSVRDDIDCLILGG CCCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCEEEECC SNAVFSLSAEQMSNQSNLTCYNLSLLNEGFSDGAYFDFIRNLAIERTQIKSIFYSSVIPL CCEEEEEEHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TNTVFLDRLESNQSQIGISGDGRVKFQFTGRSLASYLKDFLQDKPPFQSLQYPMPTPSGD HHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC FNFDEFDGCQREKIRDEWIPVTIDEDFKQWLGDNLLTVSTLFPNANISFVLPSTLRSQLS CCCCCCCCCHHHHHHHCCEEEEECHHHHHHHCCCEEEEEEECCCCCEEEEECHHHHHHCC EDDIGKFSDTLESEVVSNSAHYIAQSTFSDVSVLCDGTHHANANGREIRTSELLLLMQNR CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEHHHEEEEEECC >Mature Secondary Structure GNVNRVIFWVFIPSVLLFYIVFRVVEWQNYDDGGRQLISEQHALNLSVRDDIDCLILGG CCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCEEEECC SNAVFSLSAEQMSNQSNLTCYNLSLLNEGFSDGAYFDFIRNLAIERTQIKSIFYSSVIPL CCEEEEEEHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TNTVFLDRLESNQSQIGISGDGRVKFQFTGRSLASYLKDFLQDKPPFQSLQYPMPTPSGD HHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC FNFDEFDGCQREKIRDEWIPVTIDEDFKQWLGDNLLTVSTLFPNANISFVLPSTLRSQLS CCCCCCCCCHHHHHHHCCEEEEECHHHHHHHCCCEEEEEEECCCCCEEEEECHHHHHHCC EDDIGKFSDTLESEVVSNSAHYIAQSTFSDVSVLCDGTHHANANGREIRTSELLLLMQNR CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA