| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946562
Identifier: 119946562
GI number: 119946562
Start: 3626355
End: 3626777
Strand: Reverse
Name: 119946562
Synonym: Ping_2941
Alternate gene names: NA
Gene position: 3626777-3626355 (Counterclockwise)
Preceding gene: 119946563
Following gene: 119946561
Centisome position: 79.54
GC content: 43.97
Gene sequence:
>423_bases ATGACTGTACTTGATACACTGAATTTCGTTGCATTTAACCCACTTCAAAACAACAATCCAATCGCTGTGCGTCGTCGCAA GTTGATGGCAAAGATAGATGAACAGATCCAACTTGCAACAAACAAAGACTACACTCCCACGCAACATAAATGGGTTACTG ATGGCGAAGGCAAACAAACCAAAGTTGAAGTTGCCAAGCGTTGGTGGACAGCTAGCGTTGATGGTAAAATCAACCTTGTT GTACGTTATGGAAGCAAGCCACTAGAGTTTGCTAAAGGTAAGAATGCCATCGAACTAGCTAGCGAAGCTGAGGTGGCTGA TACACTGCGTAAGGTACGTGAAGCTGCTGAACTAGGCGAGTTAGATGTGCTGATAGAACAGCAAGCACAGTTTGGTAGAC GTTTGACACTAAAGAACAAGTGA
Upstream 100 bases:
>100_bases GGCTTATGCTAGAAAAGTTTCTGAACACTGACGACTAATCTTCGGATGACAGCCACCTAACTCTGAAAGCACAATGCTTA GAGCTAACAAGGAGGCTGTT
Downstream 100 bases:
>100_bases ACAAACGAACAGAAGAACGTGTATAATTCAGCACGTTCTACGTCGTACAGTGTGCGAGTGTAGATTGCGTAAACTATTGA ATTGCAATATGTACGTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQTKVEVAKRWWTASVDGKINLV VRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGELDVLIEQQAQFGRRLTLKNK
Sequences:
>Translated_140_residues MTVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQTKVEVAKRWWTASVDGKINLV VRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGELDVLIEQQAQFGRRLTLKNK >Mature_139_residues TVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQTKVEVAKRWWTASVDGKINLVV RYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGELDVLIEQQAQFGRRLTLKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15877; Mature: 15746
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQT CCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCHH KVEVAKRWWTASVDGKINLVVRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGE HHHHHHHHCCEECCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LDVLIEQQAQFGRRLTLKNK HHHHHHHHHHHCCEEECCCC >Mature Secondary Structure TVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQT CHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCHH KVEVAKRWWTASVDGKINLVVRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGE HHHHHHHHCCEECCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LDVLIEQQAQFGRRLTLKNK HHHHHHHHHHHCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA