Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946562

Identifier: 119946562

GI number: 119946562

Start: 3626355

End: 3626777

Strand: Reverse

Name: 119946562

Synonym: Ping_2941

Alternate gene names: NA

Gene position: 3626777-3626355 (Counterclockwise)

Preceding gene: 119946563

Following gene: 119946561

Centisome position: 79.54

GC content: 43.97

Gene sequence:

>423_bases
ATGACTGTACTTGATACACTGAATTTCGTTGCATTTAACCCACTTCAAAACAACAATCCAATCGCTGTGCGTCGTCGCAA
GTTGATGGCAAAGATAGATGAACAGATCCAACTTGCAACAAACAAAGACTACACTCCCACGCAACATAAATGGGTTACTG
ATGGCGAAGGCAAACAAACCAAAGTTGAAGTTGCCAAGCGTTGGTGGACAGCTAGCGTTGATGGTAAAATCAACCTTGTT
GTACGTTATGGAAGCAAGCCACTAGAGTTTGCTAAAGGTAAGAATGCCATCGAACTAGCTAGCGAAGCTGAGGTGGCTGA
TACACTGCGTAAGGTACGTGAAGCTGCTGAACTAGGCGAGTTAGATGTGCTGATAGAACAGCAAGCACAGTTTGGTAGAC
GTTTGACACTAAAGAACAAGTGA

Upstream 100 bases:

>100_bases
GGCTTATGCTAGAAAAGTTTCTGAACACTGACGACTAATCTTCGGATGACAGCCACCTAACTCTGAAAGCACAATGCTTA
GAGCTAACAAGGAGGCTGTT

Downstream 100 bases:

>100_bases
ACAAACGAACAGAAGAACGTGTATAATTCAGCACGTTCTACGTCGTACAGTGTGCGAGTGTAGATTGCGTAAACTATTGA
ATTGCAATATGTACGTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQTKVEVAKRWWTASVDGKINLV
VRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGELDVLIEQQAQFGRRLTLKNK

Sequences:

>Translated_140_residues
MTVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQTKVEVAKRWWTASVDGKINLV
VRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGELDVLIEQQAQFGRRLTLKNK
>Mature_139_residues
TVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQTKVEVAKRWWTASVDGKINLVV
RYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGELDVLIEQQAQFGRRLTLKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15877; Mature: 15746

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQT
CCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCHH
KVEVAKRWWTASVDGKINLVVRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGE
HHHHHHHHCCEECCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LDVLIEQQAQFGRRLTLKNK
HHHHHHHHHHHCCEEECCCC
>Mature Secondary Structure 
TVLDTLNFVAFNPLQNNNPIAVRRRKLMAKIDEQIQLATNKDYTPTQHKWVTDGEGKQT
CHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCHH
KVEVAKRWWTASVDGKINLVVRYGSKPLEFAKGKNAIELASEAEVADTLRKVREAAELGE
HHHHHHHHCCEECCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LDVLIEQQAQFGRRLTLKNK
HHHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA