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The map label for this gene is cadC [C]

Identifier: 119946521

GI number: 119946521

Start: 3575820

End: 3576668

Strand: Reverse

Name: cadC [C]

Synonym: Ping_2898

Alternate gene names: 119946521

Gene position: 3576668-3575820 (Counterclockwise)

Preceding gene: 119946522

Following gene: 119946520

Centisome position: 78.44

GC content: 38.28

Gene sequence:

>849_bases
ATGAGTATTCCTATGTTAGAAAAAAATTTAGTAGTTGGTGAGTTTCTTATCGACACAAGTCAAAACAGCTTAATCCACAC
AAACCGAAAAGTTTACCTCGGTCCTTTGCGTACATCTCTTTTGCATTTTTTGTGTAAAAATGTGAATAAAGTGGTCACTC
GAGAAGATCTTGCCCAACATGTATGGGGTAGATTAGTGACGGATCATACAATTAACCAGCATATCTCTCAACTGCGTAAA
AGTATCGGTACCTTAGTCCTGCACGGATTAAATATTTCGACTATTCCCAAGCGTGGTTATATTGCGCGTATGGATGGTAT
TGGCCTTTCAGAAAATCAGGTTGCTCCCATGGCAAGAGCCGAAGGGAATGCACATTCTGTTAAAAACATGAAAGTATTGG
TTGTTGAGACCGAAACCTCTGAGCGAAATCTGTTAATTGAGCAATTAAACACACTACAAGTGTCTTATGTAGAGTGTGTT
GCAACAAGTCTTGATGCAGAGCGTTCTGTTGCACTTCAAGATTTTGATTTGATTATTGTGGACTCTCTACTTGTCGATAA
TACGGGCATCAAGTTAATCAAAGATGTTCGTACAGGAAAAACCTCTGCTGCTGCTGATATCAGTATTTTAACCTCTCACT
TTGATGTCCAACGTGAATTGTTAGGGTTAAATAGTTTGTTAGACATTCAGGGCTTATTGCTTAAACCATTCGACAGTCAG
CGTTTAAAACAGATGTTAATGGTTGCTAATAAAGCCAATGTTATTTTAAAACCTCAAGCTGCTTATGAACTTGTACCAAC
CGATGTACTAAGCGATTTTGTTCAACCTAAGGTTGCGGTTAACGATTAA

Upstream 100 bases:

>100_bases
AGTTTAGCAGTTCGCTTGTTAAAACTTTCACAGCGTTGCGCATAGGCTTTACTGATAGGATGATGAAAGGTTGGTGTGAA
ACCCAAATTCAATAAAGAGA

Downstream 100 bases:

>100_bases
TATTCGTTGATTGCATTAAAGCTCCCACGGCAACGTTGGAGCTTTTTTTTTGTCATTTTTAATATGATAGAAAATTATAG
TGAAAGAAATAGTTAAGTGA

Product: cholera toxin transcriptional activator-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSIPMLEKNLVVGEFLIDTSQNSLIHTNRKVYLGPLRTSLLHFLCKNVNKVVTREDLAQHVWGRLVTDHTINQHISQLRK
SIGTLVLHGLNISTIPKRGYIARMDGIGLSENQVAPMARAEGNAHSVKNMKVLVVETETSERNLLIEQLNTLQVSYVECV
ATSLDAERSVALQDFDLIIVDSLLVDNTGIKLIKDVRTGKTSAAADISILTSHFDVQRELLGLNSLLDIQGLLLKPFDSQ
RLKQMLMVANKANVILKPQAAYELVPTDVLSDFVQPKVAVND

Sequences:

>Translated_282_residues
MSIPMLEKNLVVGEFLIDTSQNSLIHTNRKVYLGPLRTSLLHFLCKNVNKVVTREDLAQHVWGRLVTDHTINQHISQLRK
SIGTLVLHGLNISTIPKRGYIARMDGIGLSENQVAPMARAEGNAHSVKNMKVLVVETETSERNLLIEQLNTLQVSYVECV
ATSLDAERSVALQDFDLIIVDSLLVDNTGIKLIKDVRTGKTSAAADISILTSHFDVQRELLGLNSLLDIQGLLLKPFDSQ
RLKQMLMVANKANVILKPQAAYELVPTDVLSDFVQPKVAVND
>Mature_281_residues
SIPMLEKNLVVGEFLIDTSQNSLIHTNRKVYLGPLRTSLLHFLCKNVNKVVTREDLAQHVWGRLVTDHTINQHISQLRKS
IGTLVLHGLNISTIPKRGYIARMDGIGLSENQVAPMARAEGNAHSVKNMKVLVVETETSERNLLIEQLNTLQVSYVECVA
TSLDAERSVALQDFDLIIVDSLLVDNTGIKLIKDVRTGKTSAAADISILTSHFDVQRELLGLNSLLDIQGLLLKPFDSQR
LKQMLMVANKANVILKPQAAYELVPTDVLSDFVQPKVAVND

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790576, Length=104, Percent_Identity=36.5384615384615, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31264; Mature: 31133

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPMLEKNLVVGEFLIDTSQNSLIHTNRKVYLGPLRTSLLHFLCKNVNKVVTREDLAQH
CCCCCCCCCEEEEEEEEECCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
VWGRLVTDHTINQHISQLRKSIGTLVLHGLNISTIPKRGYIARMDGIGLSENQVAPMARA
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCEEEECCCCCCCCCCCCHHHC
EGNAHSVKNMKVLVVETETSERNLLIEQLNTLQVSYVECVATSLDAERSVALQDFDLIIV
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEHCCCCEEEE
DSLLVDNTGIKLIKDVRTGKTSAAADISILTSHFDVQRELLGLNSLLDIQGLLLKPFDSQ
HHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHH
RLKQMLMVANKANVILKPQAAYELVPTDVLSDFVQPKVAVND
HHHHHHHHHCCCCEEECCCHHHHCCCHHHHHHHHCCCEECCC
>Mature Secondary Structure 
SIPMLEKNLVVGEFLIDTSQNSLIHTNRKVYLGPLRTSLLHFLCKNVNKVVTREDLAQH
CCCCCCCCEEEEEEEEECCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
VWGRLVTDHTINQHISQLRKSIGTLVLHGLNISTIPKRGYIARMDGIGLSENQVAPMARA
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCEEEECCCCCCCCCCCCHHHC
EGNAHSVKNMKVLVVETETSERNLLIEQLNTLQVSYVECVATSLDAERSVALQDFDLIIV
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEHCCCCEEEE
DSLLVDNTGIKLIKDVRTGKTSAAADISILTSHFDVQRELLGLNSLLDIQGLLLKPFDSQ
HHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHH
RLKQMLMVANKANVILKPQAAYELVPTDVLSDFVQPKVAVND
HHHHHHHHHCCCCEEECCCHHHHCCCHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA