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The map label for this gene is petC [H]

Identifier: 119946496

GI number: 119946496

Start: 3552631

End: 3553362

Strand: Reverse

Name: petC [H]

Synonym: Ping_2872

Alternate gene names: 119946496

Gene position: 3553362-3552631 (Counterclockwise)

Preceding gene: 119946497

Following gene: 119946495

Centisome position: 77.93

GC content: 40.3

Gene sequence:

>732_bases
ATGAAAAAATTAATGATTGCCTTATTGGCATTATTACCGACACTGGTTTTTGCAGCAGGTAATGTTCAACTGGATAAAGC
TAATTATGATTTAACGGATAAAGCGTCACTGCAAAGTGGTGCTAAACTGTTTATGAATTATTGCATGGCATGTCATTCTA
CGGCACACCAACGTTATCAGCGGGTAGCAAACGATTTGGATATCCCTGAGGATTTAATGGTTAATAATCTGATGTTCACT
GACAGTAAAATTGGTGACTTGATGAAAAATAACATGGATCCAGCCGATGGCGGGAAATGGTTTGGAGTGGTTCCTCCTGA
TTTAACCTTAGTAGCACGTCTTCGAGGTCCGGATTGGATCTATACTTACTTACGCACTTTTTATGCCGATCCAACGCGTC
CATTTGGAGTTAACAATCAGGTCTTTCCTCTCGTGGGTATGCCCCATGTATTGGAAGAGTTACAGGGTGTTCCTACGGCT
ATTTATGAAACAACAGAGCATAATGGTGTTGAGCATAAAGCAATCGTCGGTTTTGAAAGTAACGGACAGGGTGAAATGAG
CTCCGATGAGTATGACAAAGCGGTCCTAAATCTGGTAAACTTCTTAGTCTATGCAGGTGAACCAAATAAATTAGAGCGTC
AAGCCCTAGGTTTTTGGGTGATAGGCTTTTTAGTTATCTTATTCATTCTTAGTTATTTACTGAAGAAGGAGTATTGGCGC
GACATTCATTAA

Upstream 100 bases:

>100_bases
CGCAGGTTGGTACTGTCGGTTACTTCGGTTTCTTTATTGCTCTTTGGCTATACAGCAAAAACGAAAAAACTAAACCACTA
CCAACGAGGTTAACATTCAA

Downstream 100 bases:

>100_bases
TCGTGAACTTTTATCTCACCTAATTTAATCGGCAGCAGTGATATTTATCACTATTGCCTTTTTAGTTTTTAAACATTCAA
CATTTTATCCATATATTAGG

Product: ubiquinol--cytochrome c reductase, cytochrome c1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKKLMIALLALLPTLVFAAGNVQLDKANYDLTDKASLQSGAKLFMNYCMACHSTAHQRYQRVANDLDIPEDLMVNNLMFT
DSKIGDLMKNNMDPADGGKWFGVVPPDLTLVARLRGPDWIYTYLRTFYADPTRPFGVNNQVFPLVGMPHVLEELQGVPTA
IYETTEHNGVEHKAIVGFESNGQGEMSSDEYDKAVLNLVNFLVYAGEPNKLERQALGFWVIGFLVILFILSYLLKKEYWR
DIH

Sequences:

>Translated_243_residues
MKKLMIALLALLPTLVFAAGNVQLDKANYDLTDKASLQSGAKLFMNYCMACHSTAHQRYQRVANDLDIPEDLMVNNLMFT
DSKIGDLMKNNMDPADGGKWFGVVPPDLTLVARLRGPDWIYTYLRTFYADPTRPFGVNNQVFPLVGMPHVLEELQGVPTA
IYETTEHNGVEHKAIVGFESNGQGEMSSDEYDKAVLNLVNFLVYAGEPNKLERQALGFWVIGFLVILFILSYLLKKEYWR
DIH
>Mature_243_residues
MKKLMIALLALLPTLVFAAGNVQLDKANYDLTDKASLQSGAKLFMNYCMACHSTAHQRYQRVANDLDIPEDLMVNNLMFT
DSKIGDLMKNNMDPADGGKWFGVVPPDLTLVARLRGPDWIYTYLRTFYADPTRPFGVNNQVFPLVGMPHVLEELQGVPTA
IYETTEHNGVEHKAIVGFESNGQGEMSSDEYDKAVLNLVNFLVYAGEPNKLERQALGFWVIGFLVILFILSYLLKKEYWR
DIH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: NA

Molecular weight: Translated: 27455; Mature: 27455

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLMIALLALLPTLVFAAGNVQLDKANYDLTDKASLQSGAKLFMNYCMACHSTAHQRYQ
CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVANDLDIPEDLMVNNLMFTDSKIGDLMKNNMDPADGGKWFGVVPPDLTLVARLRGPDWI
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHEECCCCHHH
YTYLRTFYADPTRPFGVNNQVFPLVGMPHVLEELQGVPTAIYETTEHNGVEHKAIVGFES
HHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECC
NGQGEMSSDEYDKAVLNLVNFLVYAGEPNKLERQALGFWVIGFLVILFILSYLLKKEYWR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIH
CCC
>Mature Secondary Structure
MKKLMIALLALLPTLVFAAGNVQLDKANYDLTDKASLQSGAKLFMNYCMACHSTAHQRYQ
CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVANDLDIPEDLMVNNLMFTDSKIGDLMKNNMDPADGGKWFGVVPPDLTLVARLRGPDWI
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHEECCCCHHH
YTYLRTFYADPTRPFGVNNQVFPLVGMPHVLEELQGVPTAIYETTEHNGVEHKAIVGFES
HHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECC
NGQGEMSSDEYDKAVLNLVNFLVYAGEPNKLERQALGFWVIGFLVILFILSYLLKKEYWR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA