| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946490
Identifier: 119946490
GI number: 119946490
Start: 3546648
End: 3547271
Strand: Direct
Name: 119946490
Synonym: Ping_2866
Alternate gene names: NA
Gene position: 3546648-3547271 (Clockwise)
Preceding gene: 119946489
Following gene: 119946491
Centisome position: 77.78
GC content: 37.02
Gene sequence:
>624_bases ATGGAATTGGATTGGGTAGAATGGTTTGGTTATTTAGCGTCGCTGGTGGTGCTGATTTCTCTCACTATGTCTTCAATTAT CAAACTAAGAGTGATTAACTTTATCGGTTGTCTGCTCTTTGCAAGCTTTGCCTATTTTATTGATTCAGTACCAACGATCT TTATGAATCTCAGCATTGCCTGTATTAACCTTTATTTCCTGTATCAAATTTATCGCACCAAAGAAGAATTTAAAATAATT TCAGCGTCGAAAAATTCTGAATATTTTCAGCATTTTATTAATATTAATCGCCAGGATATTGAAAAGCAGATAAATCTGGA GCAGTTAAGATCAGCTGACACATTATTTTATATGTTGCGCGATAATAATATAGCCGGCGTGCTTGCAGGCACAAAAGAAG CTGACGGTACTTTTGCCATTATGCTTGATTACGTCATCCCTAGATATCGTGACTTTAAGCTGGGTAGCTATTATTATCAA ACTCACCCAGAATTTCTGAAAGAGAAAGGGATCACGGCGCTGAAGACAACCGCAAGCGATCAGGATCATTGTTTATATCT TAATAAAATGGGCTTTGCTGCACAGCCGGACAATCAATCACAAACCTATATAAAAAGGCTCTAA
Upstream 100 bases:
>100_bases GGACATCTCTTAAACTATAAAAGCGTTGAGGTTAGAGAGTTAAATCAACACAGCTCAAGCGAAACATTCGCTTGAGCTGA AAAATAACAGAGGAATGAGT
Downstream 100 bases:
>100_bases CATTATGCAAAAAAACTATTTTACTGAACTTAAAAAACTACTTGATAATGCTCAAGCGCCCTACTCAGGATTTAATGTTG CAGCCATTGTAATAACCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIACINLYFLYQIYRTKEEFKII SASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLRDNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQ THPEFLKEKGITALKTTASDQDHCLYLNKMGFAAQPDNQSQTYIKRL
Sequences:
>Translated_207_residues MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIACINLYFLYQIYRTKEEFKII SASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLRDNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQ THPEFLKEKGITALKTTASDQDHCLYLNKMGFAAQPDNQSQTYIKRL >Mature_207_residues MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIACINLYFLYQIYRTKEEFKII SASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLRDNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQ THPEFLKEKGITALKTTASDQDHCLYLNKMGFAAQPDNQSQTYIKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24116; Mature: 24116
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CINLYFLYQIYRTKEEFKIISASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLR HHHHHHHHHHHHCHHHHEEEECCCCHHHHHHHHCCCHHHHHHHCCHHHHHCCCCEEEEEE DNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQTHPEFLKEKGITALKTTASD CCCEEEEEECCCCCCCHHEEHHHHHCCCCCCCCCCCCHHHCCHHHHHHCCCEEEEECCCC QDHCLYLNKMGFAAQPDNQSQTYIKRL CCCEEEEECCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CINLYFLYQIYRTKEEFKIISASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLR HHHHHHHHHHHHCHHHHEEEECCCCHHHHHHHHCCCHHHHHHHCCHHHHHCCCCEEEEEE DNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQTHPEFLKEKGITALKTTASD CCCEEEEEECCCCCCCHHEEHHHHHCCCCCCCCCCCCHHHCCHHHHHHCCCEEEEECCCC QDHCLYLNKMGFAAQPDNQSQTYIKRL CCCEEEEECCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA