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The map label for this gene is tolC [C]

Identifier: 119946470

GI number: 119946470

Start: 3497691

End: 3499034

Strand: Reverse

Name: tolC [C]

Synonym: Ping_2845

Alternate gene names: 119946470

Gene position: 3499034-3497691 (Counterclockwise)

Preceding gene: 119946471

Following gene: 119946469

Centisome position: 76.74

GC content: 47.99

Gene sequence:

>1344_bases
ATGCAAATAAAATATGCCAACTTTAAACCTGTAAAGCTCTTATTGTTAACACTCTGCAGTGTTATGGTAACGACGGGACA
GGCCGAGACTGATCCGCTGTTGCTAGAAGCCGCTCGTTTGCCGTTAACGGCTCAGGCAAACGTGGATAAACCGTTTACCG
GGCTGGCTGCTGCACTGCGTGCGACCATGACTCATAACCCCATGATAAAAGGCAAGCAGGCGGAACTTGAAGCGCAGCAG
TTTGGGGTCTCCAGTGCCAAAGCAAAACGTTATCCGACACTGTCCACGCTGGGCAGTAATGTGAATAATAATTATGATCA
GGCTACCTTACGGCTGGATCAGCCTCTCTGGGCCTTTGGTAAAATTGATACAGAAATTGCGCGGGCAGAATCTGAGGTTA
ATGCCGAGCAGTGGCGTTTATTGGATATTCAACGCCAGCTGCTTGAAGATACGGCAACAGTTTACGCAAAAATAGAGGGT
ATAAAACTGCGCGCAGAGGTTGCGGAAATTAATACTGAGGCGCATCAAAGCTATTATGATCGCCTTGCTCGCCGCCAAGA
AGGCCAGTTATCCTCAGAAGCGGATATGCGCTTGGCTTATGCACGTTTGCTGCAGGCACAGACGCAGTTGCTGTCCATTA
AAGGAGAGCTGTCGGATGCGCAATCTGAGCTGCAAAACCTGACTCAGATTTTAGTCTCAACCGAGCTTGCCGTTGATCCT
CAATTGGCCCTATTACCCTCAAATGTAGCTGTTCAGCGTCTGGCGATTGATCAAGAAGCCAATATTCTCCTTAAAAGGCA
GAATTTACAGGTGGTCAAACTGGGGCTTAAAGCAGAAAAACTGGCGTCATTACCGACTATCTACCTTAGAGCGGAAGCCG
ATCTTTTAGACAGTACAAGCGGCAATAAGGATCTGCGTGCCGGCCTGACTTTTGAAAGCAGTTTTGAAGGGCTGGGACTC
GTCGCGCGAGGCCGGGTAAAAGGGGCTGAGTCTCGTCTGGCGGCTGCGCGCTATGATTTGGACAGCTCGATTAATGATAC
CCGCCGCCGCATTAGCTCATTGATGCTTAACCGCCAGGTACAGCAGGGGTTAATACATGCTTATCAACAGACCGTTAATG
CCATGCAGGAAACTCTGGATTCATTTTTGCGACAATACGAAACAGGCCGGAAATCATGGTTGGAGCTGTTAAATATGCAA
CGTGAATTGACTGCCTCACAAATGCAATTAGTGCAGAGTAAAAATGACTGGTTAATTTTATCCTTACGCGTGGCATCACT
GACCGGTGGTTTAGATCAACAAGCCGGGCTAAATCAAAACCGTTTAAACGAAGCTGAAGAATAA

Upstream 100 bases:

>100_bases
AGTGAGATCTTAAAGCTGCTAGTGGTTGTGCTAGATGGACTGATTTTCCTGCTCCTGACCATTTTTTTAGGCAAAATAAT
AACCAAGAAGATAATTAAAT

Downstream 100 bases:

>100_bases
CATGACTGATATGCAAAAAAAGGCAGCACAGCTGGACTCAGGAGAGGATAGCTCAGCAAAATTTGACGGTTCTCTGCAAG
AGCAACCTTTACCCGCCAAA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Type I Secretion Outer Membrane Protein lC Family; Type I Secretion Outer Membrane Protein lC; Outer Membrane Protein; OMF Family Outer Membrane Efflux Protein; LC Family Type I Secretion Outer Membrane Protein

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MQIKYANFKPVKLLLLTLCSVMVTTGQAETDPLLLEAARLPLTAQANVDKPFTGLAAALRATMTHNPMIKGKQAELEAQQ
FGVSSAKAKRYPTLSTLGSNVNNNYDQATLRLDQPLWAFGKIDTEIARAESEVNAEQWRLLDIQRQLLEDTATVYAKIEG
IKLRAEVAEINTEAHQSYYDRLARRQEGQLSSEADMRLAYARLLQAQTQLLSIKGELSDAQSELQNLTQILVSTELAVDP
QLALLPSNVAVQRLAIDQEANILLKRQNLQVVKLGLKAEKLASLPTIYLRAEADLLDSTSGNKDLRAGLTFESSFEGLGL
VARGRVKGAESRLAAARYDLDSSINDTRRRISSLMLNRQVQQGLIHAYQQTVNAMQETLDSFLRQYETGRKSWLELLNMQ
RELTASQMQLVQSKNDWLILSLRVASLTGGLDQQAGLNQNRLNEAEE

Sequences:

>Translated_447_residues
MQIKYANFKPVKLLLLTLCSVMVTTGQAETDPLLLEAARLPLTAQANVDKPFTGLAAALRATMTHNPMIKGKQAELEAQQ
FGVSSAKAKRYPTLSTLGSNVNNNYDQATLRLDQPLWAFGKIDTEIARAESEVNAEQWRLLDIQRQLLEDTATVYAKIEG
IKLRAEVAEINTEAHQSYYDRLARRQEGQLSSEADMRLAYARLLQAQTQLLSIKGELSDAQSELQNLTQILVSTELAVDP
QLALLPSNVAVQRLAIDQEANILLKRQNLQVVKLGLKAEKLASLPTIYLRAEADLLDSTSGNKDLRAGLTFESSFEGLGL
VARGRVKGAESRLAAARYDLDSSINDTRRRISSLMLNRQVQQGLIHAYQQTVNAMQETLDSFLRQYETGRKSWLELLNMQ
RELTASQMQLVQSKNDWLILSLRVASLTGGLDQQAGLNQNRLNEAEE
>Mature_447_residues
MQIKYANFKPVKLLLLTLCSVMVTTGQAETDPLLLEAARLPLTAQANVDKPFTGLAAALRATMTHNPMIKGKQAELEAQQ
FGVSSAKAKRYPTLSTLGSNVNNNYDQATLRLDQPLWAFGKIDTEIARAESEVNAEQWRLLDIQRQLLEDTATVYAKIEG
IKLRAEVAEINTEAHQSYYDRLARRQEGQLSSEADMRLAYARLLQAQTQLLSIKGELSDAQSELQNLTQILVSTELAVDP
QLALLPSNVAVQRLAIDQEANILLKRQNLQVVKLGLKAEKLASLPTIYLRAEADLLDSTSGNKDLRAGLTFESSFEGLGL
VARGRVKGAESRLAAARYDLDSSINDTRRRISSLMLNRQVQQGLIHAYQQTVNAMQETLDSFLRQYETGRKSWLELLNMQ
RELTASQMQLVQSKNDWLILSLRVASLTGGLDQQAGLNQNRLNEAEE

Specific function: Required For Proper Expression Of Outer Membrane Protein Genes Such As Ompf, Nmpc, Protein 2, Hemolysin, Colicin V, Or Colicin E1. May Be Specialized For Signal Sequence Independent, Extracellular Secretion In Gram-Negative Bacteria. [C]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49749; Mature: 49749

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKYANFKPVKLLLLTLCSVMVTTGQAETDPLLLEAARLPLTAQANVDKPFTGLAAALR
CCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCCCCCHHHHHHHHH
ATMTHNPMIKGKQAELEAQQFGVSSAKAKRYPTLSTLGSNVNNNYDQATLRLDQPLWAFG
HHHCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCHHHHH
KIDTEIARAESEVNAEQWRLLDIQRQLLEDTATVYAKIEGIKLRAEVAEINTEAHQSYYD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECEEEEHHHHHHCHHHHHHHHH
RLARRQEGQLSSEADMRLAYARLLQAQTQLLSIKGELSDAQSELQNLTQILVSTELAVDP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
QLALLPSNVAVQRLAIDQEANILLKRQNLQVVKLGLKAEKLASLPTIYLRAEADLLDSTS
CCEECCCCHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHCCCEEEEEECCHHHCCCC
GNKDLRAGLTFESSFEGLGLVARGRVKGAESRLAAARYDLDSSINDTRRRISSLMLNRQV
CCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QQGLIHAYQQTVNAMQETLDSFLRQYETGRKSWLELLNMQRELTASQMQLVQSKNDWLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
SLRVASLTGGLDQQAGLNQNRLNEAEE
EEEEEHHCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MQIKYANFKPVKLLLLTLCSVMVTTGQAETDPLLLEAARLPLTAQANVDKPFTGLAAALR
CCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCCCCCHHHHHHHHH
ATMTHNPMIKGKQAELEAQQFGVSSAKAKRYPTLSTLGSNVNNNYDQATLRLDQPLWAFG
HHHCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCHHHHH
KIDTEIARAESEVNAEQWRLLDIQRQLLEDTATVYAKIEGIKLRAEVAEINTEAHQSYYD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECEEEEHHHHHHCHHHHHHHHH
RLARRQEGQLSSEADMRLAYARLLQAQTQLLSIKGELSDAQSELQNLTQILVSTELAVDP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
QLALLPSNVAVQRLAIDQEANILLKRQNLQVVKLGLKAEKLASLPTIYLRAEADLLDSTS
CCEECCCCHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHHCCCEEEEEECCHHHCCCC
GNKDLRAGLTFESSFEGLGLVARGRVKGAESRLAAARYDLDSSINDTRRRISSLMLNRQV
CCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QQGLIHAYQQTVNAMQETLDSFLRQYETGRKSWLELLNMQRELTASQMQLVQSKNDWLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
SLRVASLTGGLDQQAGLNQNRLNEAEE
EEEEEHHCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA