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The map label for this gene is ynjB [H]

Identifier: 119946394

GI number: 119946394

Start: 3405754

End: 3406899

Strand: Direct

Name: ynjB [H]

Synonym: Ping_2768

Alternate gene names: 119946394

Gene position: 3405754-3406899 (Clockwise)

Preceding gene: 119946393

Following gene: 119946395

Centisome position: 74.69

GC content: 42.32

Gene sequence:

>1146_bases
ATGAAAAAATTAATCACTCTGTTCAGCCTGTTACTACTGACAACCTTTGCTCAGGCAGAAGATGTAAATTGGCAGAAGAT
TGAAGAAAAAGCTCAGAGTCAAACAGTTTATTTTTACGCTTGGGGTGGCAGTCAGGATATTAACAACTATTTACGCTGGG
CAGATAAACGCCTACAAGCAGAATACGGTGTCACCCTAAAACACGTAAAAGTCACCGATATCTCTGAAGCCATTACGCGT
CTAGTAGCAGAAAAAAGCGCCAACAAAAATAGCAATGGCAGTATTGATATGGTTTGGATTAATGGCGAAAACTTTAAATC
AATGAAGGACTTTAATCTATTAACCGAGCCCTTTGTAACCAATCTTCCTAACTGGCAATATGTTGATAAATCACTGCCCG
TAGACAGTGATTTTGCAGAGCCGACACTAGGGTTAGAAGCCCCATGGGGCGTTGGGCAGCTGGTGTTTATTTATGACAAA
AATAAAGTAGATAATCCACCGCAGAGCCATAGCGAAATGCTGGTATATGCAAAGAGCCATCCAAATAAACTCAGTTATCC
CCGCCCGCCTTCATTTCATGGTACCAGTTTTCTTAAATCTGCATTGATCGAACTCAGTGAAAATCCTGACGCTTTGTATT
CGCCCGTTGATGACACTACTTTTGCACAGATAACTGCACCCTTATGGTCATATTTAGAGGACTTTCATCAGGTTGCCTGG
CGTCAAGGTAAACAGTTCCCGGCTAACAGTGCGGAAACACTGCAATTACTTGATGATGGTGAATTAGACTTGGCTATCTC
CTTTAATCCTAATGAAGTATTTAGTGCCCAGGCAAACGGTTTATTAAGAGATTCAACCACAGCTTATGCGCTTGCAGCCG
GTGCACTGTCTAATATTCACTTCCTGTCAATTCCCTGGAATGCCGCTGCAAAAGAGGGTGCGCTAGTGGCGATTAATTTT
CTGCTCAGCCCTGAAGCACAGCTAAAAAAAGCAGATATTTCGGTCTGGGGTGATCCGACTGTTTTACAATCATCAAAGGT
CAGTAGTTCGAGCCAAAAAACAACTTTATTTAAATCCATTAGTGAGCCGCACCCCAGTTGGCAAATCGCCCTGGAAACTG
AATGGCAAAAAAGATATGGTCATTAA

Upstream 100 bases:

>100_bases
ATAAAGCGACAGCCGGAATGTGGAAGAAAGACCATGCGCCGCAAACGCTGCTGCTGTGGGTCGAGAAATATTTTAATTGG
ACGCGTAAAAAGGATCTATC

Downstream 100 bases:

>100_bases
AAATAGTTGCTGCTGGCGATGAATGGCTCAATACAAAAAATTTCATTTCATTTTTTACTGGTATTGGCCATTTTGGTCTG
CTTTACACCTTTATTACCGG

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKKLITLFSLLLLTTFAQAEDVNWQKIEEKAQSQTVYFYAWGGSQDINNYLRWADKRLQAEYGVTLKHVKVTDISEAITR
LVAEKSANKNSNGSIDMVWINGENFKSMKDFNLLTEPFVTNLPNWQYVDKSLPVDSDFAEPTLGLEAPWGVGQLVFIYDK
NKVDNPPQSHSEMLVYAKSHPNKLSYPRPPSFHGTSFLKSALIELSENPDALYSPVDDTTFAQITAPLWSYLEDFHQVAW
RQGKQFPANSAETLQLLDDGELDLAISFNPNEVFSAQANGLLRDSTTAYALAAGALSNIHFLSIPWNAAAKEGALVAINF
LLSPEAQLKKADISVWGDPTVLQSSKVSSSSQKTTLFKSISEPHPSWQIALETEWQKRYGH

Sequences:

>Translated_381_residues
MKKLITLFSLLLLTTFAQAEDVNWQKIEEKAQSQTVYFYAWGGSQDINNYLRWADKRLQAEYGVTLKHVKVTDISEAITR
LVAEKSANKNSNGSIDMVWINGENFKSMKDFNLLTEPFVTNLPNWQYVDKSLPVDSDFAEPTLGLEAPWGVGQLVFIYDK
NKVDNPPQSHSEMLVYAKSHPNKLSYPRPPSFHGTSFLKSALIELSENPDALYSPVDDTTFAQITAPLWSYLEDFHQVAW
RQGKQFPANSAETLQLLDDGELDLAISFNPNEVFSAQANGLLRDSTTAYALAAGALSNIHFLSIPWNAAAKEGALVAINF
LLSPEAQLKKADISVWGDPTVLQSSKVSSSSQKTTLFKSISEPHPSWQIALETEWQKRYGH
>Mature_381_residues
MKKLITLFSLLLLTTFAQAEDVNWQKIEEKAQSQTVYFYAWGGSQDINNYLRWADKRLQAEYGVTLKHVKVTDISEAITR
LVAEKSANKNSNGSIDMVWINGENFKSMKDFNLLTEPFVTNLPNWQYVDKSLPVDSDFAEPTLGLEAPWGVGQLVFIYDK
NKVDNPPQSHSEMLVYAKSHPNKLSYPRPPSFHGTSFLKSALIELSENPDALYSPVDDTTFAQITAPLWSYLEDFHQVAW
RQGKQFPANSAETLQLLDDGELDLAISFNPNEVFSAQANGLLRDSTTAYALAAGALSNIHFLSIPWNAAAKEGALVAINF
LLSPEAQLKKADISVWGDPTVLQSSKVSSSSQKTTLFKSISEPHPSWQIALETEWQKRYGH

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=365, Percent_Identity=44.1095890410959, Blast_Score=326, Evalue=1e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 42653; Mature: 42653

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLITLFSLLLLTTFAQAEDVNWQKIEEKAQSQTVYFYAWGGSQDINNYLRWADKRLQA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH
EYGVTLKHVKVTDISEAITRLVAEKSANKNSNGSIDMVWINGENFKSMKDFNLLTEPFVT
HCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
NLPNWQYVDKSLPVDSDFAEPTLGLEAPWGVGQLVFIYDKNKVDNPPQSHSEMLVYAKSH
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC
PNKLSYPRPPSFHGTSFLKSALIELSENPDALYSPVDDTTFAQITAPLWSYLEDFHQVAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQGKQFPANSAETLQLLDDGELDLAISFNPNEVFSAQANGLLRDSTTAYALAAGALSNIH
HCCCCCCCCCCCEEEEECCCCEEEEEEECCCHHHHHHCCCCEECCCHHHHHHHHHHCCEE
FLSIPWNAAAKEGALVAINFLLSPEAQLKKADISVWGDPTVLQSSKVSSSSQKTTLFKSI
EEEECCCCCCCCCCEEEEEEEECCCHHHEECCEEECCCCCEEECCCCCCCCHHHHHHHHH
SEPHPSWQIALETEWQKRYGH
CCCCCCEEEEEEECHHHHCCC
>Mature Secondary Structure
MKKLITLFSLLLLTTFAQAEDVNWQKIEEKAQSQTVYFYAWGGSQDINNYLRWADKRLQA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH
EYGVTLKHVKVTDISEAITRLVAEKSANKNSNGSIDMVWINGENFKSMKDFNLLTEPFVT
HCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
NLPNWQYVDKSLPVDSDFAEPTLGLEAPWGVGQLVFIYDKNKVDNPPQSHSEMLVYAKSH
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC
PNKLSYPRPPSFHGTSFLKSALIELSENPDALYSPVDDTTFAQITAPLWSYLEDFHQVAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQGKQFPANSAETLQLLDDGELDLAISFNPNEVFSAQANGLLRDSTTAYALAAGALSNIH
HCCCCCCCCCCCEEEEECCCCEEEEEEECCCHHHHHHCCCCEECCCHHHHHHHHHHCCEE
FLSIPWNAAAKEGALVAINFLLSPEAQLKKADISVWGDPTVLQSSKVSSSSQKTTLFKSI
EEEECCCCCCCCCCEEEEEEEECCCHHHEECCEEECCCCCEEECCCCCCCCHHHHHHHHH
SEPHPSWQIALETEWQKRYGH
CCCCCCEEEEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]