| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is cysP [C]
Identifier: 119946372
GI number: 119946372
Start: 3368938
End: 3369945
Strand: Reverse
Name: cysP [C]
Synonym: Ping_2746
Alternate gene names: 119946372
Gene position: 3369945-3368938 (Counterclockwise)
Preceding gene: 119946376
Following gene: 119946371
Centisome position: 73.91
GC content: 41.07
Gene sequence:
>1008_bases ATGAAAACTCGTTTGATAAAAACAACACTCGCAGCAGCGTTGGCATTATGTGCTGCAAATAGTTATGCAACACAGAATGT AACGGTTTATACCGCATTTGAAACAGACCTTTTAGCAAAATATAAAAACGCTTTTGAAAATGATAATCCGGATATTTCTA TCAAATGGGTACGTGATTCAACGGGTATTATGACCGCAAAATTATTAGCCGAAAAGAATAACCCCCGTGCCGAAGTTGTT TGGGGACTCGCAGGATCTTCAATGGCTTTATTAAAAACTGAAGGCATCTTAAAAACTTATACACCAAAAGGTCTCGCCGC GTTAGATCCCTCGTTAAATGATCCTCAGGCGGATCAGGCCTGGTTTGGTAATGATGCCTTTTTTAATGCTATTTGTTTTA ACGATATAGTGGCTGAACAGTACAACTTACCACTGCCAACATCATGGGATGATTTAACAAAACCTGTCTATAAAGGTCAT ATCGCTATGCCAAATCCAGCCTCATCGGGTACGGGTTATATGCAGGTATCAGCATGGTTACAAAATATGGGTGAAGGAAA AGCCTGGAACTACATGACAGAATTGGATAAAAATATCTCTCATTATACACATTCGGGTTCAAAACCTTGTGTGCAGGCAG GCATGGGCGAAGTGGCTATTGGTATTTCCATGGCAAGTCGCGGCACTAAGCTAAAAACACAAGGTGCACCACTGACATTA GTGACGCCCGAGGGAATTGGTTGGGAATCTGAAGCGGTGGGTTTAGTAAAAGACAATGCTGCAGCTAAACGTGTTGTTGA CTGGTCTGTTTCCAAACAAGCGAATGAATTATATATAGAAGTGTACCCTGTGGTTGGGCATAAAGACGTACATAAAGAAG TCAAAAACTTCCCGAATGTGAAACCCGTGATGGCAAAAATGGATTTTGCGCGTATGGGTGACCAGAGAGCACAAGTGTTA AAAACATGGTCTGAAAAATTCGATAGCAAATCAGAACCAAGAAGTTAA
Upstream 100 bases:
>100_bases TATTTATTTAATAATTCTGTCACAAACGGGCTGTACAGTTAACACTTGAAACTGGTACATACCAATTAGCGCACAACTTA TTAAGAACCTGGAGATTAAT
Downstream 100 bases:
>100_bases GTCATCCCAAAAATAAGGAGGTTAACCTCCTTATTTTCTTTTTTTAGATCCAAAGAATAAGTGCATTATTATTTTTATTA ATAGTCAGGTTTTTATTATG
Product: ABC transporter periplasmic substrate-binding protein
Products: SO42- [Cytoplasm]; phosphate; ADP; S2O32- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKTRLIKTTLAAALALCAANSYATQNVTVYTAFETDLLAKYKNAFENDNPDISIKWVRDSTGIMTAKLLAEKNNPRAEVV WGLAGSSMALLKTEGILKTYTPKGLAALDPSLNDPQADQAWFGNDAFFNAICFNDIVAEQYNLPLPTSWDDLTKPVYKGH IAMPNPASSGTGYMQVSAWLQNMGEGKAWNYMTELDKNISHYTHSGSKPCVQAGMGEVAIGISMASRGTKLKTQGAPLTL VTPEGIGWESEAVGLVKDNAAAKRVVDWSVSKQANELYIEVYPVVGHKDVHKEVKNFPNVKPVMAKMDFARMGDQRAQVL KTWSEKFDSKSEPRS
Sequences:
>Translated_335_residues MKTRLIKTTLAAALALCAANSYATQNVTVYTAFETDLLAKYKNAFENDNPDISIKWVRDSTGIMTAKLLAEKNNPRAEVV WGLAGSSMALLKTEGILKTYTPKGLAALDPSLNDPQADQAWFGNDAFFNAICFNDIVAEQYNLPLPTSWDDLTKPVYKGH IAMPNPASSGTGYMQVSAWLQNMGEGKAWNYMTELDKNISHYTHSGSKPCVQAGMGEVAIGISMASRGTKLKTQGAPLTL VTPEGIGWESEAVGLVKDNAAAKRVVDWSVSKQANELYIEVYPVVGHKDVHKEVKNFPNVKPVMAKMDFARMGDQRAQVL KTWSEKFDSKSEPRS >Mature_335_residues MKTRLIKTTLAAALALCAANSYATQNVTVYTAFETDLLAKYKNAFENDNPDISIKWVRDSTGIMTAKLLAEKNNPRAEVV WGLAGSSMALLKTEGILKTYTPKGLAALDPSLNDPQADQAWFGNDAFFNAICFNDIVAEQYNLPLPTSWDDLTKPVYKGH IAMPNPASSGTGYMQVSAWLQNMGEGKAWNYMTELDKNISHYTHSGSKPCVQAGMGEVAIGISMASRGTKLKTQGAPLTL VTPEGIGWESEAVGLVKDNAAAKRVVDWSVSKQANELYIEVYPVVGHKDVHKEVKNFPNVKPVMAKMDFARMGDQRAQVL KTWSEKFDSKSEPRS
Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. This Protein Specifically Binds Thiosulfate And Is Involved In Its Transmembrane Transport. [C]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36719; Mature: 36719
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRLIKTTLAAALALCAANSYATQNVTVYTAFETDLLAKYKNAFENDNPDISIKWVRDS CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECC TGIMTAKLLAEKNNPRAEVVWGLAGSSMALLKTEGILKTYTPKGLAALDPSLNDPQADQA CCCEEEEEHHCCCCCCEEEEEEECCCCEEEEEECCCEEECCCCCCEECCCCCCCCCCCCC WFGNDAFFNAICFNDIVAEQYNLPLPTSWDDLTKPVYKGHIAMPNPASSGTGYMQVSAWL CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCEEHHHHH QNMGEGKAWNYMTELDKNISHYTHSGSKPCVQAGMGEVAIGISMASRGTKLKTQGAPLTL HHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCCEEEECCCCEEE VTPEGIGWESEAVGLVKDNAAAKRVVDWSVSKQANELYIEVYPVVGHKDVHKEVKNFPNV ECCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCC KPVMAKMDFARMGDQRAQVLKTWSEKFDSKSEPRS CHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKTRLIKTTLAAALALCAANSYATQNVTVYTAFETDLLAKYKNAFENDNPDISIKWVRDS CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECC TGIMTAKLLAEKNNPRAEVVWGLAGSSMALLKTEGILKTYTPKGLAALDPSLNDPQADQA CCCEEEEEHHCCCCCCEEEEEEECCCCEEEEEECCCEEECCCCCCEECCCCCCCCCCCCC WFGNDAFFNAICFNDIVAEQYNLPLPTSWDDLTKPVYKGHIAMPNPASSGTGYMQVSAWL CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCEEHHHHH QNMGEGKAWNYMTELDKNISHYTHSGSKPCVQAGMGEVAIGISMASRGTKLKTQGAPLTL HHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCCEEEECCCCEEE VTPEGIGWESEAVGLVKDNAAAKRVVDWSVSKQANELYIEVYPVVGHKDVHKEVKNFPNV ECCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCC KPVMAKMDFARMGDQRAQVLKTWSEKFDSKSEPRS CHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: SO42- [Periplasm]; H2O; ATP; S2O32- [Periplasm] [C]
Specific reaction: SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]