BacMap

Definition	Psychromonas ingrahamii 37, complete genome.
Accession	NC_008709
Length	4,559,598

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The map label for this gene is dbpA [H]

Identifier: 119946353

GI number: 119946353

Start: 3340516

End: 3341904

Strand: Direct

Name: dbpA [H]

Synonym: Ping_2724

Alternate gene names: 119946353

Gene position: 3340516-3341904 (Clockwise)

Preceding gene: 119946352

Following gene: 119946354

Centisome position: 73.26

GC content: 42.26

Gene sequence:

>1389_bases
TTGAGCCAATCCCCTTTCTCAACACTACCATTACATACCGATCTTTTACATAACCTAGAGTCTTTAGGCTATCACGTAAT
GACCCCCATTCAAGCGCAAAGTTTACCGCATGTACTCGCAGGTAAAGATGTTATCGCACAGGGTAAAACCGGCTCCGGCA
AAACAGCCGCGTTTGGTTTAGGTTTGTTAGAAAAACTGAGTGTTAAGCGTTTTCGTATCCAAAGTTTAATTTTATGCCCG
ACACGCGAACTTGCCGATCAGGTTGGTAAAGAGCTACGCAGGCTTGCCCGCACCATTCATAATATTAAAGTATTAACCTT
ATGTGGCGGAGTGCCCTTTGGACCACAAATCGGATCACTGGAGCATGGTGCACATATTATTGTTGGTACACCGGGACGTA
TCGAAGATCATCTGCGCAAAGGTACACTGCGTTTGGATGATTTAGAAGTATTAGTCTTGGATGAAGCCGACCGCATGTTA
GATATGGGCTTTCAAGCATCGATCGATGCAATCATAGATCAAGCCCCTAAAAAGCGCCAAACATTATTATTTAGTGCCAC
TTTCCCGGAAAAAATTAATAATATCGCCAAACGAATTATGACTGATCCGATCATGGTTAAAGCAGAATCTAAACATGATG
ACTCAGTTATTGCCCAGCATTTTTATAAAGTAGAGAATAGCCAGGATCGTATGATAGCCCTGCGCTTATTATTGCAAAAG
TATCAACCAGAATCATCGGTGGTTTTCTGCAATACTAAAAAAGAAGTACAGGAAGTGGCTGATGAACTTGCAAACCGGGG
GTTTAGCGCGCTTGCCCTGCACGGTGATTTAGAGCAAAAAGATCGCGACCAGGCATTAATCCGTTTTGCCAATAAAAGTG
CCTCTATTCTTGTTGCAACCGATGTGGCAGCGCGTGGTTTGGATATTGATAATCTCAGTGCTGTTTTTAATTATCATATC
GCACATGATCAAGAACTGCATGTTCATCGTATTGGCCGTACAGGGCGGGCAGGAAACAAAGGCTTAGCATTCTCTTTTTA
CAGTGATAAAGAGCATCACAAAGTCTCTGTATTGGAGGACTATTTAGATCGTTCTATTTCACCAGAACAACTGCCTCTTT
TAAATTTACTTGATAAAGAACCTCAGCAATCAAACATGATAACGATTCGAATTGATGGTGGTAAACGTCAAAAAATCAGA
CCGGGTGATATCGTTGGCGCATTAACCGGAGAAAATGGTATTAGCGGCGATCAAGTGGGCAAAATCCACGTATCGGATAA
CTGGTCATATATTGCAGTACAGCGCGACGTTATTAAAGTTGCCTTTAAAAAATTAAGCGAAGGCAAACTTAAAGGCCGTA
CCTTTCGTGTAATGGTTGTTCGCGGTTAG

Upstream 100 bases:

>100_bases
TCAGAGAATATTAGCGCAGATACTTTGTTAAGCGGTTAACAAAATGTTATGGTGCGTCACTTTTAAACTTACAAAACAGA
CATTCTATAGGATCTAAACA

Downstream 100 bases:

>100_bases
TATTAAAATAATTTTTATGGTTCAGATGGTCACCTATCTGAACTTTTTTTCTTTTCCTTGTGCAAATACGCCTCCCAAAA
AACGCACAACTTCTCGTCCA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSQSPFSTLPLHTDLLHNLESLGYHVMTPIQAQSLPHVLAGKDVIAQGKTGSGKTAAFGLGLLEKLSVKRFRIQSLILCP
TRELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRIEDHLRKGTLRLDDLEVLVLDEADRML
DMGFQASIDAIIDQAPKKRQTLLFSATFPEKINNIAKRIMTDPIMVKAESKHDDSVIAQHFYKVENSQDRMIALRLLLQK
YQPESSVVFCNTKKEVQEVADELANRGFSALALHGDLEQKDRDQALIRFANKSASILVATDVAARGLDIDNLSAVFNYHI
AHDQELHVHRIGRTGRAGNKGLAFSFYSDKEHHKVSVLEDYLDRSISPEQLPLLNLLDKEPQQSNMITIRIDGGKRQKIR
PGDIVGALTGENGISGDQVGKIHVSDNWSYIAVQRDVIKVAFKKLSEGKLKGRTFRVMVVRG

Sequences:

>Translated_462_residues
MSQSPFSTLPLHTDLLHNLESLGYHVMTPIQAQSLPHVLAGKDVIAQGKTGSGKTAAFGLGLLEKLSVKRFRIQSLILCP
TRELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRIEDHLRKGTLRLDDLEVLVLDEADRML
DMGFQASIDAIIDQAPKKRQTLLFSATFPEKINNIAKRIMTDPIMVKAESKHDDSVIAQHFYKVENSQDRMIALRLLLQK
YQPESSVVFCNTKKEVQEVADELANRGFSALALHGDLEQKDRDQALIRFANKSASILVATDVAARGLDIDNLSAVFNYHI
AHDQELHVHRIGRTGRAGNKGLAFSFYSDKEHHKVSVLEDYLDRSISPEQLPLLNLLDKEPQQSNMITIRIDGGKRQKIR
PGDIVGALTGENGISGDQVGKIHVSDNWSYIAVQRDVIKVAFKKLSEGKLKGRTFRVMVVRG
>Mature_461_residues
SQSPFSTLPLHTDLLHNLESLGYHVMTPIQAQSLPHVLAGKDVIAQGKTGSGKTAAFGLGLLEKLSVKRFRIQSLILCPT
RELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRIEDHLRKGTLRLDDLEVLVLDEADRMLD
MGFQASIDAIIDQAPKKRQTLLFSATFPEKINNIAKRIMTDPIMVKAESKHDDSVIAQHFYKVENSQDRMIALRLLLQKY
QPESSVVFCNTKKEVQEVADELANRGFSALALHGDLEQKDRDQALIRFANKSASILVATDVAARGLDIDNLSAVFNYHIA
HDQELHVHRIGRTGRAGNKGLAFSFYSDKEHHKVSVLEDYLDRSISPEQLPLLNLLDKEPQQSNMITIRIDGGKRQKIRP
GDIVGALTGENGISGDQVGKIHVSDNWSYIAVQRDVIKVAFKKLSEGKLKGRTFRVMVVRG

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=35.8490566037736, Blast_Score=255, Evalue=8e-68,
Organism=Homo sapiens, GI45446747, Length=409, Percent_Identity=37.1638141809291, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI45446743, Length=409, Percent_Identity=37.1638141809291, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI50659095, Length=370, Percent_Identity=39.1891891891892, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=38.3033419023136, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=38.3033419023136, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=38.3033419023136, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI169881239, Length=389, Percent_Identity=38.0462724935733, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI13514809, Length=389, Percent_Identity=38.0462724935733, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI41327773, Length=344, Percent_Identity=38.6627906976744, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI20149629, Length=428, Percent_Identity=33.8785046728972, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=32.2314049586777, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI4758138, Length=360, Percent_Identity=36.6666666666667, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=35.7142857142857, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI38201710, Length=364, Percent_Identity=35.7142857142857, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI21071032, Length=354, Percent_Identity=37.0056497175141, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=36.7567567567568, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI31542656, Length=385, Percent_Identity=34.5454545454545, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=37.5350140056022, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=37.5350140056022, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=37.5350140056022, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=37.5350140056022, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=37.2881355932203, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI41327779, Length=371, Percent_Identity=35.0404312668464, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=35.5263157894737, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4758112, Length=375, Percent_Identity=32.8, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI18375623, Length=375, Percent_Identity=32.8, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=36.3636363636364, Blast_Score=201, Evalue=8e-52,
Organism=Homo sapiens, GI222352149, Length=372, Percent_Identity=34.1397849462366, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI21040371, Length=374, Percent_Identity=31.5508021390374, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI83700235, Length=375, Percent_Identity=33.8666666666667, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=33.9622641509434, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI51094101, Length=367, Percent_Identity=34.0599455040872, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI164419743, Length=367, Percent_Identity=34.0599455040872, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=32.4712643678161, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=32.112676056338, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI55749865, Length=373, Percent_Identity=30.0268096514745, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI38327634, Length=338, Percent_Identity=34.3195266272189, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=32.9639889196676, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI41327776, Length=428, Percent_Identity=29.9065420560748, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=32.4324324324324, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=32.4324324324324, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI62241022, Length=354, Percent_Identity=32.4858757062147, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI62241024, Length=332, Percent_Identity=32.5301204819277, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=29.5673076923077, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI38569503, Length=353, Percent_Identity=30.8781869688385, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI38569505, Length=353, Percent_Identity=30.8781869688385, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=29.2929292929293, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI4826686, Length=331, Percent_Identity=29.9093655589124, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI256773275, Length=393, Percent_Identity=28.498727735369, Blast_Score=129, Evalue=9e-30,
Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=34.2105263157895, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI20336298, Length=355, Percent_Identity=28.7323943661972, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI154759257, Length=421, Percent_Identity=26.3657957244656, Blast_Score=102, Evalue=1e-21,
Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=54.4662309368192, Blast_Score=486, Evalue=1e-138,
Organism=Escherichia coli, GI87082221, Length=378, Percent_Identity=41.7989417989418, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=39.572192513369, Blast_Score=258, Evalue=8e-70,
Organism=Escherichia coli, GI1790214, Length=412, Percent_Identity=35.1941747572816, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI1788930, Length=334, Percent_Identity=36.8263473053892, Blast_Score=206, Evalue=4e-54,
Organism=Escherichia coli, GI48994977, Length=339, Percent_Identity=23.8938053097345, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71995724, Length=376, Percent_Identity=36.436170212766, Blast_Score=255, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17507121, Length=376, Percent_Identity=36.436170212766, Blast_Score=254, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=32.972972972973, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=36.8563685636856, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI17552642, Length=380, Percent_Identity=37.6315789473684, Blast_Score=227, Evalue=9e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=37.0165745856354, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=381, Percent_Identity=37.5328083989501, Blast_Score=224, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=357, Percent_Identity=38.0952380952381, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17510307, Length=357, Percent_Identity=38.0952380952381, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71995514, Length=357, Percent_Identity=38.0952380952381, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=38.7096774193548, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=403, Percent_Identity=35.4838709677419, Blast_Score=221, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=31.9559228650138, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=37.9032258064516, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71982858, Length=375, Percent_Identity=32.5333333333333, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71999646, Length=352, Percent_Identity=35.7954545454545, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=346, Percent_Identity=37.8612716763006, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI71999644, Length=352, Percent_Identity=35.7954545454545, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=36.3881401617251, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=32.4468085106383, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI115532548, Length=358, Percent_Identity=33.7988826815642, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=370, Percent_Identity=33.7837837837838, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=32.8083989501312, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17537549, Length=361, Percent_Identity=32.1329639889197, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=30.2857142857143, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=348, Percent_Identity=32.183908045977, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=33.5227272727273, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=31.5521628498728, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=31.5521628498728, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=31.5521628498728, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17553716, Length=376, Percent_Identity=28.1914893617021, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI193208216, Length=410, Percent_Identity=31.9512195121951, Blast_Score=151, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17556951, Length=383, Percent_Identity=26.6318537859008, Blast_Score=138, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17508543, Length=364, Percent_Identity=28.2967032967033, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=29.0155440414508, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI71990816, Length=367, Percent_Identity=30.5177111716621, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI32564046, Length=364, Percent_Identity=29.1208791208791, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=23.5011990407674, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=368, Percent_Identity=26.9021739130435, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=367, Percent_Identity=28.8828337874659, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=344, Percent_Identity=23.2558139534884, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=37.1428571428571, Blast_Score=87, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=34.5013477088949, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=38.7267904509284, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=37.3684210526316, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6324217, Length=373, Percent_Identity=36.1930294906166, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6321360, Length=353, Percent_Identity=39.3767705382436, Blast_Score=225, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6321856, Length=403, Percent_Identity=34.9875930521092, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=37.0879120879121, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=32.3204419889503, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=34.4173441734417, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=34.4173441734417, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=34.9162011173184, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=31.5035799522673, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6323947, Length=346, Percent_Identity=34.1040462427746, Blast_Score=186, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=29.7752808988764, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=372, Percent_Identity=31.989247311828, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=31.3984168865435, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=385, Percent_Identity=33.5064935064935, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=31.283422459893, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=31.7934782608696, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=30.6763285024155, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=371, Percent_Identity=30.7277628032345, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6321267, Length=351, Percent_Identity=31.9088319088319, Blast_Score=144, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=24.8780487804878, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=25.8139534883721, Blast_Score=116, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=25.8426966292135, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321374, Length=380, Percent_Identity=23.6842105263158, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=35.3099730458221, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24662330, Length=344, Percent_Identity=40.406976744186, Blast_Score=244, Evalue=8e-65,
Organism=Drosophila melanogaster, GI28574962, Length=378, Percent_Identity=36.5079365079365, Blast_Score=231, Evalue=8e-61,
Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=37.2222222222222, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24642151, Length=343, Percent_Identity=37.9008746355685, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI17985987, Length=377, Percent_Identity=37.6657824933687, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=35.8695652173913, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=36.3896848137536, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24585582, Length=345, Percent_Identity=37.1014492753623, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17977678, Length=354, Percent_Identity=36.4406779661017, Blast_Score=214, Evalue=9e-56,
Organism=Drosophila melanogaster, GI17136814, Length=354, Percent_Identity=38.135593220339, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24582080, Length=369, Percent_Identity=33.8753387533875, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24582078, Length=369, Percent_Identity=33.8753387533875, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI17136248, Length=369, Percent_Identity=33.8753387533875, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24582075, Length=369, Percent_Identity=33.8753387533875, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24644487, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI45551833, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24644485, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI281361218, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24644481, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24644483, Length=387, Percent_Identity=34.1085271317829, Blast_Score=209, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24644479, Length=387, Percent_Identity=34.1085271317829, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24583281, Length=363, Percent_Identity=31.404958677686, Blast_Score=207, Evalue=8e-54,
Organism=Drosophila melanogaster, GI24583279, Length=363, Percent_Identity=31.404958677686, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI21356161, Length=405, Percent_Identity=34.320987654321, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=34.7480106100796, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24584994, Length=370, Percent_Identity=33.5135135135135, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24581954, Length=379, Percent_Identity=32.4538258575198, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24581952, Length=379, Percent_Identity=32.4538258575198, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24581956, Length=379, Percent_Identity=32.4538258575198, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=36.9281045751634, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI21355559, Length=387, Percent_Identity=33.5917312661499, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI28571808, Length=338, Percent_Identity=33.1360946745562, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI28571809, Length=338, Percent_Identity=33.1360946745562, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24642822, Length=388, Percent_Identity=31.1855670103093, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI17647335, Length=355, Percent_Identity=28.4507042253521, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=28.9887640449438, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=28.9887640449438, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=30.1369863013699, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=31.5151515151515, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=26.8354430379747, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI20130173, Length=348, Percent_Identity=31.3218390804598, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI19920478, Length=370, Percent_Identity=29.7297297297297, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI17136666, Length=407, Percent_Identity=26.2899262899263, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24640164, Length=389, Percent_Identity=22.879177377892, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 51249; Mature: 51118

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSPFSTLPLHTDLLHNLESLGYHVMTPIQAQSLPHVLAGKDVIAQGKTGSGKTAAFGL
CCCCCCCCCCCHHHHHHHHHHCCEEEECCCCHHCCCHHHCCCCEEECCCCCCCCHHHHHH
GLLEKLSVKRFRIQSLILCPTRELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSL
HHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCC
EHGAHIIVGTPGRIEDHLRKGTLRLDDLEVLVLDEADRMLDMGFQASIDAIIDQAPKKRQ
CCCCEEEEECCCHHHHHHHHCCEEECCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCE
TLLFSATFPEKINNIAKRIMTDPIMVKAESKHDDSVIAQHFYKVENSQDRMIALRLLLQK
EEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
YQPESSVVFCNTKKEVQEVADELANRGFSALALHGDLEQKDRDQALIRFANKSASILVAT
CCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEE
DVAARGLDIDNLSAVFNYHIAHDQELHVHRIGRTGRAGNKGLAFSFYSDKEHHKVSVLED
CHHHCCCCCCCHHHHEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHH
YLDRSISPEQLPLLNLLDKEPQQSNMITIRIDGGKRQKIRPGDIVGALTGENGISGDQVG
HHCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEE
KIHVSDNWSYIAVQRDVIKVAFKKLSEGKLKGRTFRVMVVRG
EEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
SQSPFSTLPLHTDLLHNLESLGYHVMTPIQAQSLPHVLAGKDVIAQGKTGSGKTAAFGL
CCCCCCCCCCHHHHHHHHHHCCEEEECCCCHHCCCHHHCCCCEEECCCCCCCCHHHHHH
GLLEKLSVKRFRIQSLILCPTRELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSL
HHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCC
EHGAHIIVGTPGRIEDHLRKGTLRLDDLEVLVLDEADRMLDMGFQASIDAIIDQAPKKRQ
CCCCEEEEECCCHHHHHHHHCCEEECCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCE
TLLFSATFPEKINNIAKRIMTDPIMVKAESKHDDSVIAQHFYKVENSQDRMIALRLLLQK
EEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
YQPESSVVFCNTKKEVQEVADELANRGFSALALHGDLEQKDRDQALIRFANKSASILVAT
CCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEE
DVAARGLDIDNLSAVFNYHIAHDQELHVHRIGRTGRAGNKGLAFSFYSDKEHHKVSVLED
CHHHCCCCCCCHHHHEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHH
YLDRSISPEQLPLLNLLDKEPQQSNMITIRIDGGKRQKIRPGDIVGALTGENGISGDQVG
HHCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEE
KIHVSDNWSYIAVQRDVIKVAFKKLSEGKLKGRTFRVMVVRG
EEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]