| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yeeX [C]
Identifier: 119946350
GI number: 119946350
Start: 3336543
End: 3336845
Strand: Direct
Name: yeeX [C]
Synonym: Ping_2721
Alternate gene names: 119946350
Gene position: 3336543-3336845 (Clockwise)
Preceding gene: 119946349
Following gene: 119946351
Centisome position: 73.18
GC content: 30.36
Gene sequence:
>303_bases ATGGATAATTTGCTTGAATTGGTAAGAAATACTCGCCGTAAGAACAAACTCAAACGTGAAATCCTTGATAATGAGAAAAA AGTTCGCGATAACACTAAACGTGTAGATCTGCTTTCTAATTTATTAGAATATATTAAACCTAATATGTCACCTGAAGATA TAAAATGCATTATTGAAAATATGCGCGACGATTATGAAGATCGTGTTGATGAGCACATTATTAAAGGTGCAGAGCTTTCA AAAGAACGTCGTGAAATGAATAAAAAAATCAGTTCATTTAAACTTAAAGAAATAGCTAAATAA
Upstream 100 bases:
>100_bases GTTATTAAAAATAACTATCCCGTTTTTAACCACAATCGGTATAATGATCTGAGCTGACTTAACAATTTCAATTTTTAATA TTTAAAGAAAAGGTAAAATA
Downstream 100 bases:
>100_bases TTATTTGAGTTAAATGAATAAAAAGGGATAGCTGAGCTATCCCTTTTTATTGTTTTGTTGATAGTTGTCTTTTTTCTGAA TTATCGGGTGAATCGTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDNLLELVRNTRRKNKLKREILDNEKKVRDNTKRVDLLSNLLEYIKPNMSPEDIKCIIENMRDDYEDRVDEHIIKGAELS KERREMNKKISSFKLKEIAK
Sequences:
>Translated_100_residues MDNLLELVRNTRRKNKLKREILDNEKKVRDNTKRVDLLSNLLEYIKPNMSPEDIKCIIENMRDDYEDRVDEHIIKGAELS KERREMNKKISSFKLKEIAK >Mature_100_residues MDNLLELVRNTRRKNKLKREILDNEKKVRDNTKRVDLLSNLLEYIKPNMSPEDIKCIIENMRDDYEDRVDEHIIKGAELS KERREMNKKISSFKLKEIAK
Specific function: Unknown
COG id: COG2926
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0265 family
Homologues:
Organism=Escherichia coli, GI145693155, Length=93, Percent_Identity=62.3655913978495, Blast_Score=111, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2721_PSYIN (A1SY66)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944030.1 - STRING: A1SY66 - GeneID: 4625900 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2721 - eggNOG: COG2926 - HOGENOM: HBG296852 - OMA: YEDRVDE - PhylomeDB: A1SY66 - ProtClustDB: PRK05423 - BioCyc: PING357804:PING_2721-MONOMER - HAMAP: MF_00683 - InterPro: IPR007458 - PIRSF: PIRSF028773 - ProDom: PD030876
Pfam domain/function: PF04363 DUF496
EC number: NA
Molecular weight: Translated: 12044; Mature: 12044
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNLLELVRNTRRKNKLKREILDNEKKVRDNTKRVDLLSNLLEYIKPNMSPEDIKCIIEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MRDDYEDRVDEHIIKGAELSKERREMNKKISSFKLKEIAK HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNLLELVRNTRRKNKLKREILDNEKKVRDNTKRVDLLSNLLEYIKPNMSPEDIKCIIEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MRDDYEDRVDEHIIKGAELSKERREMNKKISSFKLKEIAK HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA