| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946337
Identifier: 119946337
GI number: 119946337
Start: 3323729
End: 3324130
Strand: Reverse
Name: 119946337
Synonym: Ping_2708
Alternate gene names: NA
Gene position: 3324130-3323729 (Counterclockwise)
Preceding gene: 119946338
Following gene: 119946336
Centisome position: 72.9
GC content: 37.81
Gene sequence:
>402_bases ATGTGTATAACAGGGGGAGATAATTTGAACAGACCTAAGCTCACCTTGATTCGCGGGTTGCCGGGCAGTGGTAAATCGAC CTTAGCAAAAACATTAAATGCCGTTCATTTAGAAGCGGATATGTATTTTATAAACAAACAGGGTGAATACCAATTTGATT CTCGGCGATTAAAAGAAGCGCATTTATGGTGTCAAAATCAATGTGAATATTATTTAAATAGAGGTGAGAATGTGGTCATC GCGAACACTTTTGTGCAGCATTGGGAAATAGCACCTTACCGTAAGCTGGCTAAATTATTTAATGCCATATTAACCATTAA AGTCTGTACCGGTAACTATCAGAACAGTCATGATGTTGATCTGTTATCCATCAATAAAATGAAGAAAAACTGGCAGCGCT AA
Upstream 100 bases:
>100_bases ATCTACCGCTAGAGGATTAACGCAGTTAATCGCTCGAAAAGTCATGTTGCGTCTTGCTCTGATCGAAGATCTTGCACCTG ACAAAGCATTTTGACGTAAC
Downstream 100 bases:
>100_bases TCAATTGTCAACATTATCATCAAAATCAGCCACTCAATTGATACATTTAAACTAAGCTTTCAATTACACACTATAAACTT AGCGTTATTGGATTCTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MCITGGDNLNRPKLTLIRGLPGSGKSTLAKTLNAVHLEADMYFINKQGEYQFDSRRLKEAHLWCQNQCEYYLNRGENVVI ANTFVQHWEIAPYRKLAKLFNAILTIKVCTGNYQNSHDVDLLSINKMKKNWQR
Sequences:
>Translated_133_residues MCITGGDNLNRPKLTLIRGLPGSGKSTLAKTLNAVHLEADMYFINKQGEYQFDSRRLKEAHLWCQNQCEYYLNRGENVVI ANTFVQHWEIAPYRKLAKLFNAILTIKVCTGNYQNSHDVDLLSINKMKKNWQR >Mature_133_residues MCITGGDNLNRPKLTLIRGLPGSGKSTLAKTLNAVHLEADMYFINKQGEYQFDSRRLKEAHLWCQNQCEYYLNRGENVVI ANTFVQHWEIAPYRKLAKLFNAILTIKVCTGNYQNSHDVDLLSINKMKKNWQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI119226224, Length=137, Percent_Identity=31.3868613138686, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI119226227, Length=89, Percent_Identity=39.3258426966292, Blast_Score=67, Evalue=6e-12, Organism=Homo sapiens, GI7656971, Length=90, Percent_Identity=38.8888888888889, Blast_Score=66, Evalue=9e-12, Organism=Homo sapiens, GI31742492, Length=129, Percent_Identity=38.7596899224806, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15390; Mature: 15390
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCITGGDNLNRPKLTLIRGLPGSGKSTLAKTLNAVHLEADMYFINKQGEYQFDSRRLKEA CEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHH HLWCQNQCEYYLNRGENVVIANTFVQHWEIAPYRKLAKLFNAILTIKVCTGNYQNSHDVD HHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCEE LLSINKMKKNWQR EEEHHHHHHHCCC >Mature Secondary Structure MCITGGDNLNRPKLTLIRGLPGSGKSTLAKTLNAVHLEADMYFINKQGEYQFDSRRLKEA CEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHH HLWCQNQCEYYLNRGENVVIANTFVQHWEIAPYRKLAKLFNAILTIKVCTGNYQNSHDVD HHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCEE LLSINKMKKNWQR EEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA