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The map label for this gene is 119946309

Identifier: 119946309

GI number: 119946309

Start: 3281762

End: 3283108

Strand: Reverse

Name: 119946309

Synonym: Ping_2678

Alternate gene names: NA

Gene position: 3283108-3281762 (Counterclockwise)

Preceding gene: 119946310

Following gene: 119946304

Centisome position: 72.0

GC content: 53.23

Gene sequence:

>1347_bases
ATGAATAAGTTAATACGGTTTTGGGGTGATCTGCGATCGAGTTTCTGGTTTTTGCCTTTTCTGATCGTTCTGAGCAGCAT
TATTTACGCGATAGCGTTGATCAGAATAGACCGCGCCGGGAGCGACCGATGGCTGGGCCAGTGGCCGCAGATATTTGGAG
TCGGGGCGGAAGGCGCACGCGAAATGTTGTCCACGCTCGCTGGTTCGATGATGACGGTTATGGGCATCACGTTCTCCATG
ACCCTGCTGGCACTGACGCTGGCTTCTAGCCAGTACTCCTCACGCGTCTTGCGCAACTTTATGCGCAGCCGTGTCACGCA
GGTTACGTTGGGAACCTTTGCCGGAATTTTCGTCTATTGTTTGATCGTGATGCACACTATTCGCACTGTCGATGCGCCAT
TCGTGCCCAGTGTGGCGGTGTTTTTCGCCTTTCTTCTGGCACTTGGCGGCATTGCCGTCCTCATTTTTTTTATTCATCAC
ATTGCCTCGTCGATCCAGGCATCCAACATCATCGCCTCCGTCGCTCAGGATACCTACGTTTCTATCGATCGGCTGCTGCC
AAAAAAACTGGATCATGAGCCCGATGAATACGAAAGCCGGAATCAGGTGCTCGAGTCACTGGATGAGAGGGTCTGGTATC
CAGTGCCGGTAGCCGTGAGTGGTTACATTCAAAGTGTGGATTATGATGCGCTGCTGCAACTGGCGGAGGACAGCAGGACC
ATAGTGCGTATGGAGCACGGCATCGGCGCGTTCGTTGTGCAAGATACGGCGCTAGTATCACTCGCCCTGACCTACCCGCC
AGACCAGAAGATAATTGATGCACTTAATGGTGCTTACAGTATTGGCCGAAATCGCCTCGTTGAGCAGGATCCAGCTTTCG
GTATCAGGCAAATTGTGGATATAGCCATCAAGGCACTTTCTCCCGGAATCAATGACACCTCAACGGCGGTTATGTGCGTG
GACTATCTGGCTGCGATTCTGGCTCGGCTGGCCGGTAGACAATTCCCGCCCGTGCAACGTTACGAGGGAGAAACGCTGCG
TGTGATAGCGATCGTTCCGAGCTTTGAGGGGCTATTGGCCGAGTCCTTCGATCAGATTCGAGCTAACGCTGAAGTGAATG
TTGCCATACTGGCGCGTATCCTTAGCGCTTTTGATAGCATCGGCAGCCTGACGTTCAGAGACAGTCACTTACGAGCACTC
AACGAACAGCTGCAGTGCATTGCCGAACTGGCCAATCGCTGCATCAAATCCAGCCATGATAGCGCGCGGCTCAAAAAGCG
TTTGTCGGAGGTGCGTGAAACGCTGAAAGCTCAGTCAGCATTGTGCGCAGCGGAAGATAAGGGCTAG

Upstream 100 bases:

>100_bases
TTATGCTAAAAGTTGTTGCATGACAGGCTGCTCGACAATAAGGCCTATATCGAAAAATACGGTGGAGTCATACTGGAGAT
TCTAAACCGGGGGTGGAAAC

Downstream 100 bases:

>100_bases
CAAGAGCTCTGGGTTCAAGTCTTGCCTTTTGCCTAAATTGTAAAAAATCTTTTAAAAAAAGGATTGGCTGTTCAGCCTTT
TACTCTAAAGTCAGCCCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MNKLIRFWGDLRSSFWFLPFLIVLSSIIYAIALIRIDRAGSDRWLGQWPQIFGVGAEGAREMLSTLAGSMMTVMGITFSM
TLLALTLASSQYSSRVLRNFMRSRVTQVTLGTFAGIFVYCLIVMHTIRTVDAPFVPSVAVFFAFLLALGGIAVLIFFIHH
IASSIQASNIIASVAQDTYVSIDRLLPKKLDHEPDEYESRNQVLESLDERVWYPVPVAVSGYIQSVDYDALLQLAEDSRT
IVRMEHGIGAFVVQDTALVSLALTYPPDQKIIDALNGAYSIGRNRLVEQDPAFGIRQIVDIAIKALSPGINDTSTAVMCV
DYLAAILARLAGRQFPPVQRYEGETLRVIAIVPSFEGLLAESFDQIRANAEVNVAILARILSAFDSIGSLTFRDSHLRAL
NEQLQCIAELANRCIKSSHDSARLKKRLSEVRETLKAQSALCAAEDKG

Sequences:

>Translated_448_residues
MNKLIRFWGDLRSSFWFLPFLIVLSSIIYAIALIRIDRAGSDRWLGQWPQIFGVGAEGAREMLSTLAGSMMTVMGITFSM
TLLALTLASSQYSSRVLRNFMRSRVTQVTLGTFAGIFVYCLIVMHTIRTVDAPFVPSVAVFFAFLLALGGIAVLIFFIHH
IASSIQASNIIASVAQDTYVSIDRLLPKKLDHEPDEYESRNQVLESLDERVWYPVPVAVSGYIQSVDYDALLQLAEDSRT
IVRMEHGIGAFVVQDTALVSLALTYPPDQKIIDALNGAYSIGRNRLVEQDPAFGIRQIVDIAIKALSPGINDTSTAVMCV
DYLAAILARLAGRQFPPVQRYEGETLRVIAIVPSFEGLLAESFDQIRANAEVNVAILARILSAFDSIGSLTFRDSHLRAL
NEQLQCIAELANRCIKSSHDSARLKKRLSEVRETLKAQSALCAAEDKG
>Mature_448_residues
MNKLIRFWGDLRSSFWFLPFLIVLSSIIYAIALIRIDRAGSDRWLGQWPQIFGVGAEGAREMLSTLAGSMMTVMGITFSM
TLLALTLASSQYSSRVLRNFMRSRVTQVTLGTFAGIFVYCLIVMHTIRTVDAPFVPSVAVFFAFLLALGGIAVLIFFIHH
IASSIQASNIIASVAQDTYVSIDRLLPKKLDHEPDEYESRNQVLESLDERVWYPVPVAVSGYIQSVDYDALLQLAEDSRT
IVRMEHGIGAFVVQDTALVSLALTYPPDQKIIDALNGAYSIGRNRLVEQDPAFGIRQIVDIAIKALSPGINDTSTAVMCV
DYLAAILARLAGRQFPPVQRYEGETLRVIAIVPSFEGLLAESFDQIRANAEVNVAILARILSAFDSIGSLTFRDSHLRAL
NEQLQCIAELANRCIKSSHDSARLKKRLSEVRETLKAQSALCAAEDKG

Specific function: Unknown

COG id: COG4325

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018723 [H]

Pfam domain/function: PF10011 DUF2254 [H]

EC number: NA

Molecular weight: Translated: 49484; Mature: 49484

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]