| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946304
Identifier: 119946304
GI number: 119946304
Start: 3275855
End: 3276853
Strand: Reverse
Name: 119946304
Synonym: Ping_2672
Alternate gene names: NA
Gene position: 3276853-3275855 (Counterclockwise)
Preceding gene: 119946309
Following gene: 119946303
Centisome position: 71.87
GC content: 29.03
Gene sequence:
>999_bases ATGAATAATTTTATTATGCCCTTAAAAATAAAAAATGAGAAAAATGAGACAAGAAAGGTGGGTTTTGAATTAGAATTTTC AAATATAGAGATTGAAAATATACTTCAAATATTACAACAAGGCTTTGATTTTGAAATCAAAAAGAAAAACAAATTTTTAT ATAAATTAAACTCAAAATATGGGGAATTCACCTTAGAGCTTGATTTTGAGCTGTTAACAAAGCAAAAATTGAAAAATAGT TTAAAGGACTTTTTTAAACAGGTCAGTATAGATATTGATGAAAATAGCATTAATAAAGTAGAAGATATTATCGGCTCCTT ATCACAAGATATAGTGCCCTATGAGATAAGCACTCCCCCTTTGCCTTTAGATGACATGGAAATAATTAACAGTATTGTGA AAAAACTCTATCAAAATAAAGCGTTTGGAACAAAAGAAAGATTTTATAATGCGTTTGGATTGCATATAAATATTGAAGCA GTCTCTTTGGAAGTTGAAAGTTTATTATCATACATACAGGCTTATATGATTTTACAGGATTATATAACGCAAGATGCTGA TATTGATTTAGCGAGAAAAATAACCCCTTATATCGATAATTTTAAAACGGATTATATCATTCATATTTTGGATGAAACCT ATAAACCAAACATCAATGAACTTATTGAGGATTACATTCAATACAACCCCACAAGAAACCGTTCATTGGATTTACTTCCT ATGTTTGCATTTATAGATAAAAAAAGAGTAATGGAGAAGCTACCCGATGAAAAGATAAAACCACGTCCAGCATTTCATTA TAGGTTATCAAATTCTATGGTAGGAGATAGTGCTTGGAAAGTCTCAGATGAATGGAATAGATGGGTATGGGTTGAGAAGC TGGCAAATGATAAAAACGCTTTAAAAGATTTATCCAAAGAGTATTTGAACTATTTAAATAATTTTTTAAATTTTAAAAAT TGGCAGAGCAGGATGGAAAAATGGATAAAAAGCCATTAG
Upstream 100 bases:
>100_bases ATTGGGCAATAATGTGAGTTTTTTATGAACAGAGAATTTCAAAAAAGAATTGGCTGTCCTATATTTTTATAGGAATCTTT AATGAGTTTGGGGGACTGCT
Downstream 100 bases:
>100_bases TTGGAATATGTCTTCCTGATAAGGGTAATATTTTTGCTTATATTTTTATCAGGTTGAATTTATACATGCAAAAAGCGAAA TGGATTAGCCTAAGACCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNNFIMPLKIKNEKNETRKVGFELEFSNIEIENILQILQQGFDFEIKKKNKFLYKLNSKYGEFTLELDFELLTKQKLKNS LKDFFKQVSIDIDENSINKVEDIIGSLSQDIVPYEISTPPLPLDDMEIINSIVKKLYQNKAFGTKERFYNAFGLHINIEA VSLEVESLLSYIQAYMILQDYITQDADIDLARKITPYIDNFKTDYIIHILDETYKPNINELIEDYIQYNPTRNRSLDLLP MFAFIDKKRVMEKLPDEKIKPRPAFHYRLSNSMVGDSAWKVSDEWNRWVWVEKLANDKNALKDLSKEYLNYLNNFLNFKN WQSRMEKWIKSH
Sequences:
>Translated_332_residues MNNFIMPLKIKNEKNETRKVGFELEFSNIEIENILQILQQGFDFEIKKKNKFLYKLNSKYGEFTLELDFELLTKQKLKNS LKDFFKQVSIDIDENSINKVEDIIGSLSQDIVPYEISTPPLPLDDMEIINSIVKKLYQNKAFGTKERFYNAFGLHINIEA VSLEVESLLSYIQAYMILQDYITQDADIDLARKITPYIDNFKTDYIIHILDETYKPNINELIEDYIQYNPTRNRSLDLLP MFAFIDKKRVMEKLPDEKIKPRPAFHYRLSNSMVGDSAWKVSDEWNRWVWVEKLANDKNALKDLSKEYLNYLNNFLNFKN WQSRMEKWIKSH >Mature_332_residues MNNFIMPLKIKNEKNETRKVGFELEFSNIEIENILQILQQGFDFEIKKKNKFLYKLNSKYGEFTLELDFELLTKQKLKNS LKDFFKQVSIDIDENSINKVEDIIGSLSQDIVPYEISTPPLPLDDMEIINSIVKKLYQNKAFGTKERFYNAFGLHINIEA VSLEVESLLSYIQAYMILQDYITQDADIDLARKITPYIDNFKTDYIIHILDETYKPNINELIEDYIQYNPTRNRSLDLLP MFAFIDKKRVMEKLPDEKIKPRPAFHYRLSNSMVGDSAWKVSDEWNRWVWVEKLANDKNALKDLSKEYLNYLNNFLNFKN WQSRMEKWIKSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39509; Mature: 39509
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFIMPLKIKNEKNETRKVGFELEFSNIEIENILQILQQGFDFEIKKKNKFLYKLNSKY CCCCEEEEEECCCCCHHHHCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCEEEEECCCC GEFTLELDFELLTKQKLKNSLKDFFKQVSIDIDENSINKVEDIIGSLSQDIVPYEISTPP CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCC LPLDDMEIINSIVKKLYQNKAFGTKERFYNAFGLHINIEAVSLEVESLLSYIQAYMILQD CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHH YITQDADIDLARKITPYIDNFKTDYIIHILDETYKPNINELIEDYIQYNPTRNRSLDLLP HHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHH MFAFIDKKRVMEKLPDEKIKPRPAFHYRLSNSMVGDSAWKVSDEWNRWVWVEKLANDKNA HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEHHHHHHCCHHH LKDLSKEYLNYLNNFLNFKNWQSRMEKWIKSH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MNNFIMPLKIKNEKNETRKVGFELEFSNIEIENILQILQQGFDFEIKKKNKFLYKLNSKY CCCCEEEEEECCCCCHHHHCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCEEEEECCCC GEFTLELDFELLTKQKLKNSLKDFFKQVSIDIDENSINKVEDIIGSLSQDIVPYEISTPP CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCC LPLDDMEIINSIVKKLYQNKAFGTKERFYNAFGLHINIEAVSLEVESLLSYIQAYMILQD CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHH YITQDADIDLARKITPYIDNFKTDYIIHILDETYKPNINELIEDYIQYNPTRNRSLDLLP HHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHH MFAFIDKKRVMEKLPDEKIKPRPAFHYRLSNSMVGDSAWKVSDEWNRWVWVEKLANDKNA HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEHHHHHHCCHHH LKDLSKEYLNYLNNFLNFKNWQSRMEKWIKSH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA