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The map label for this gene is yulF [H]

Identifier: 119946298

GI number: 119946298

Start: 3267946

End: 3268929

Strand: Reverse

Name: yulF [H]

Synonym: Ping_2666

Alternate gene names: 119946298

Gene position: 3268929-3267946 (Counterclockwise)

Preceding gene: 119946299

Following gene: 119946297

Centisome position: 71.69

GC content: 41.57

Gene sequence:

>984_bases
ATGAACTCACTGAAAAATAGGAATATTCGCTGGGGAATTATCGGCTTAGGTAATATAGCCGATACATTCGCGCGTGATTT
ATTAACGGTTAAGGGCGCAGAGTTATATGCCGTCGCCTCAAGAACCGAGCAAAAAGCGCGAGCCTTTGCGCAAAAGCATC
AGGCAACTAAAGCCTATGGAAGCTACGAAGCTTTAGTCAATGACGCAAATATTGATGCTGTTTATATAGCAACCCCCCAT
TCAGAGCATAAAAAACATGCACTCTTATGTTTAGATAAGGGGATCGCGGTGTTATGCGAAAAACCTTTGGCTATGAATGC
TGAACAAGTGAACAGCATGATTGCCGTTGCACAAAAAAATAATGTGTTGTTGATGGAAGCGCTTTGGACCTATTTTCTGC
CGCATTATCAGTTTGTATTAACCGCGTTAAATAACCAAACCTATGGCAAGCTCCTTAAAATAGAAGCAGATTTTGGTTTT
ATAAAAGAATTCGACGGTCAATCCCGGCTGTTTAACAAATCACTGGGCGGAGGCAGTCTTTTAGATATCGGTATCTACCC
AATATTTGCGGCACTTTCGACACTTGGCGTGCCGGATAGCATAACAGCTGATGCGACCTTTTTTGATAACGGGGCAGATT
CCTCCTGCGCCATGACATTTAACTATAACAATGGCTCGACCGCATTATTAAAATCGACATTGTTGGAAGCGACACCCGGT
GAAGCGCTGTTCCATTGCGAGCAGGGCACTATTAAAATTAACCGCGATTTTCATAGCCCGTCAACGGTCACTCTAATTAA
TGGTACAACCCAGGAAAACAGAAATTTTGACTGCAAAACACAGGGCTATAACCATGAAATAACTCATTTTAATGGGCTGT
TACGTCAACAAAAAACTGAAAGTGATATTATGACCTTTAATTTTAGCCGAAACCTGATAGAAACGTTAGACCGCGTTAGA
GAGGTTATTGGTTTGAAATATTAA

Upstream 100 bases:

>100_bases
AAAAAACAATCTCTCCGGAACTGCAGGAAAAACTGAAAGAGTATTATAAAATCCAGGTTAAATCAGCGCCTTTAGGCTGG
TAAATTTTAGGCAGCAATAA

Downstream 100 bases:

>100_bases
TCCTTTTACCTTCCAGCTTTTGTTCTCCCGCCTTTTGTTATTCTCAAGTTCAAGCAACCTTATTGTGCAGTTTAGGCCTT
TTTAGTGGTAAGGTTCTAGA

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNSLKNRNIRWGIIGLGNIADTFARDLLTVKGAELYAVASRTEQKARAFAQKHQATKAYGSYEALVNDANIDAVYIATPH
SEHKKHALLCLDKGIAVLCEKPLAMNAEQVNSMIAVAQKNNVLLMEALWTYFLPHYQFVLTALNNQTYGKLLKIEADFGF
IKEFDGQSRLFNKSLGGGSLLDIGIYPIFAALSTLGVPDSITADATFFDNGADSSCAMTFNYNNGSTALLKSTLLEATPG
EALFHCEQGTIKINRDFHSPSTVTLINGTTQENRNFDCKTQGYNHEITHFNGLLRQQKTESDIMTFNFSRNLIETLDRVR
EVIGLKY

Sequences:

>Translated_327_residues
MNSLKNRNIRWGIIGLGNIADTFARDLLTVKGAELYAVASRTEQKARAFAQKHQATKAYGSYEALVNDANIDAVYIATPH
SEHKKHALLCLDKGIAVLCEKPLAMNAEQVNSMIAVAQKNNVLLMEALWTYFLPHYQFVLTALNNQTYGKLLKIEADFGF
IKEFDGQSRLFNKSLGGGSLLDIGIYPIFAALSTLGVPDSITADATFFDNGADSSCAMTFNYNNGSTALLKSTLLEATPG
EALFHCEQGTIKINRDFHSPSTVTLINGTTQENRNFDCKTQGYNHEITHFNGLLRQQKTESDIMTFNFSRNLIETLDRVR
EVIGLKY
>Mature_327_residues
MNSLKNRNIRWGIIGLGNIADTFARDLLTVKGAELYAVASRTEQKARAFAQKHQATKAYGSYEALVNDANIDAVYIATPH
SEHKKHALLCLDKGIAVLCEKPLAMNAEQVNSMIAVAQKNNVLLMEALWTYFLPHYQFVLTALNNQTYGKLLKIEADFGF
IKEFDGQSRLFNKSLGGGSLLDIGIYPIFAALSTLGVPDSITADATFFDNGADSSCAMTFNYNNGSTALLKSTLLEATPG
EALFHCEQGTIKINRDFHSPSTVTLINGTTQENRNFDCKTQGYNHEITHFNGLLRQQKTESDIMTFNFSRNLIETLDRVR
EVIGLKY

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=331, Percent_Identity=32.3262839879154, Blast_Score=171, Evalue=7e-43,
Organism=Escherichia coli, GI145693182, Length=253, Percent_Identity=32.0158102766798, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787574, Length=218, Percent_Identity=30.2752293577982, Blast_Score=89, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24581117, Length=327, Percent_Identity=33.9449541284404, Blast_Score=168, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24581115, Length=331, Percent_Identity=28.3987915407855, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24584727, Length=328, Percent_Identity=25.9146341463415, Blast_Score=112, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36280; Mature: 36280

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLKNRNIRWGIIGLGNIADTFARDLLTVKGAELYAVASRTEQKARAFAQKHQATKAYG
CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
SYEALVNDANIDAVYIATPHSEHKKHALLCLDKGIAVLCEKPLAMNAEQVNSMIAVAQKN
CHHHEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHEEEEEECC
NVLLMEALWTYFLPHYQFVLTALNNQTYGKLLKIEADFGFIKEFDGQSRLFNKSLGGGSL
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCHHHHHCCCCCCCE
LDIGIYPIFAALSTLGVPDSITADATFFDNGADSSCAMTFNYNNGSTALLKSTLLEATPG
EEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCC
EALFHCEQGTIKINRDFHSPSTVTLINGTTQENRNFDCKTQGYNHEITHFNGLLRQQKTE
CEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
SDIMTFNFSRNLIETLDRVREVIGLKY
CCEEEEECCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSLKNRNIRWGIIGLGNIADTFARDLLTVKGAELYAVASRTEQKARAFAQKHQATKAYG
CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
SYEALVNDANIDAVYIATPHSEHKKHALLCLDKGIAVLCEKPLAMNAEQVNSMIAVAQKN
CHHHEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHEEEEEECC
NVLLMEALWTYFLPHYQFVLTALNNQTYGKLLKIEADFGFIKEFDGQSRLFNKSLGGGSL
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCHHHHHCCCCCCCE
LDIGIYPIFAALSTLGVPDSITADATFFDNGADSSCAMTFNYNNGSTALLKSTLLEATPG
EEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCC
EALFHCEQGTIKINRDFHSPSTVTLINGTTQENRNFDCKTQGYNHEITHFNGLLRQQKTE
CEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
SDIMTFNFSRNLIETLDRVREVIGLKY
CCEEEEECCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]