| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yccK [H]
Identifier: 119946299
GI number: 119946299
Start: 3268947
End: 3269882
Strand: Reverse
Name: yccK [H]
Synonym: Ping_2667
Alternate gene names: 119946299
Gene position: 3269882-3268947 (Counterclockwise)
Preceding gene: 119946300
Following gene: 119946298
Centisome position: 71.71
GC content: 42.63
Gene sequence:
>936_bases ATGAAACAAAGAAAATATGGAAAAACTGGAAAAAGGGTCTCGGAGCTGGGGTTTGGCGCATGGCAGTTAGGTAATGCTAA TAAAAATGAATGGGGAGATTTAAACCAGGATCCTATTCGCCTTGTTCATGCTGCCATCGATCAGGGCATTAACTTTTTTG ATACTGCGCCTAACTATGGCCTGGGCGCCTCGATGGAATATTTAGGCAAAGCACTGGTGGGTAAACGCGCTGATGTTGTC ATAAACACTAAGTTCGGGCACAACCCTGAGGGTCAAAATTTTGATCATAAAACCCTGAAAAAAACCGTCGAAAACACATT GACTACTTTAAAAACCGATTATATTGATTCAGTGCTGCTGCACAGTCCTGTTATTGAATTCTGTGATGGTGAACATCCCG TTTATAAGGTGTTTCAGGAATTAGTACAGGAAGGTAAAATACTTAGCTTTGGTGCCTCGCTGGATGATTATCAAAGTATC CATAAACTGGTGACAACAACCCCCAGTAATATCGTTATGCCGCTTTATAATATCAACTTTCAAGACACGGGTGATGCGTT TAAAGAAGCCGCTGAAAAAGACTATGGCATAGTCGTAAAAGTGCCGCTCGACTCGGGCTGGTTAACGGGTAAGTTTACAG ATAAAAGTCGCTTTAATGATATACGCTCGCGCTGGTCTAATGATGATATTGAGCGCCGTTTTGCGCTGCAGCAGGAGCTG CTTAACATAATCGGCTCTGAGATGAGACTTCATGAGGCTGCGCTGTCATTTATTCTTGCACAATCTGAAGTTTCTACAGT GATCCCCGGGATAAAAAATGAGCAGCAGTTGGCTGATAATATCGCCGCGTCTCAAAAAACAATCTCTCCGGAACTGCAGG AAAAACTGAAAGAGTATTATAAAATCCAGGTTAAATCAGCGCCTTTAGGCTGGTAA
Upstream 100 bases:
>100_bases GCGTAAAACGCTTGTAAAACAGGCAATTAAGGTAAATTATAAAGGATGTTTAATCGTTCTAAAATCGATTGACTGGATAA AGTAACTAAGTGGATAAGAT
Downstream 100 bases:
>100_bases ATTTTAGGCAGCAATAAATGAACTCACTGAAAAATAGGAATATTCGCTGGGGAATTATCGGCTTAGGTAATATAGCCGAT ACATTCGCGCGTGATTTATT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKQRKYGKTGKRVSELGFGAWQLGNANKNEWGDLNQDPIRLVHAAIDQGINFFDTAPNYGLGASMEYLGKALVGKRADVV INTKFGHNPEGQNFDHKTLKKTVENTLTTLKTDYIDSVLLHSPVIEFCDGEHPVYKVFQELVQEGKILSFGASLDDYQSI HKLVTTTPSNIVMPLYNINFQDTGDAFKEAAEKDYGIVVKVPLDSGWLTGKFTDKSRFNDIRSRWSNDDIERRFALQQEL LNIIGSEMRLHEAALSFILAQSEVSTVIPGIKNEQQLADNIAASQKTISPELQEKLKEYYKIQVKSAPLGW
Sequences:
>Translated_311_residues MKQRKYGKTGKRVSELGFGAWQLGNANKNEWGDLNQDPIRLVHAAIDQGINFFDTAPNYGLGASMEYLGKALVGKRADVV INTKFGHNPEGQNFDHKTLKKTVENTLTTLKTDYIDSVLLHSPVIEFCDGEHPVYKVFQELVQEGKILSFGASLDDYQSI HKLVTTTPSNIVMPLYNINFQDTGDAFKEAAEKDYGIVVKVPLDSGWLTGKFTDKSRFNDIRSRWSNDDIERRFALQQEL LNIIGSEMRLHEAALSFILAQSEVSTVIPGIKNEQQLADNIAASQKTISPELQEKLKEYYKIQVKSAPLGW >Mature_311_residues MKQRKYGKTGKRVSELGFGAWQLGNANKNEWGDLNQDPIRLVHAAIDQGINFFDTAPNYGLGASMEYLGKALVGKRADVV INTKFGHNPEGQNFDHKTLKKTVENTLTTLKTDYIDSVLLHSPVIEFCDGEHPVYKVFQELVQEGKILSFGASLDDYQSI HKLVTTTPSNIVMPLYNINFQDTGDAFKEAAEKDYGIVVKVPLDSGWLTGKFTDKSRFNDIRSRWSNDDIERRFALQQEL LNIIGSEMRLHEAALSFILAQSEVSTVIPGIKNEQQLADNIAASQKTISPELQEKLKEYYKIQVKSAPLGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=324, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=25.8566978193146, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27436964, Length=313, Percent_Identity=24.6006389776358, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1788070, Length=331, Percent_Identity=28.0966767371601, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87081735, Length=329, Percent_Identity=24.6200607902736, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1789375, Length=314, Percent_Identity=27.3885350318471, Blast_Score=74, Evalue=9e-15, Organism=Drosophila melanogaster, GI24646155, Length=326, Percent_Identity=27.9141104294479, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34957; Mature: 34957
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRKYGKTGKRVSELGFGAWQLGNANKNEWGDLNQDPIRLVHAAIDQGINFFDTAPNYG CCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCC LGASMEYLGKALVGKRADVVINTKFGHNPEGQNFDHKTLKKTVENTLTTLKTDYIDSVLL CCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HSPVIEFCDGEHPVYKVFQELVQEGKILSFGASLDDYQSIHKLVTTTPSNIVMPLYNINF HHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCC QDTGDAFKEAAEKDYGIVVKVPLDSGWLTGKFTDKSRFNDIRSRWSNDDIERRFALQQEL CCCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH LNIIGSEMRLHEAALSFILAQSEVSTVIPGIKNEQQLADNIAASQKTISPELQEKLKEYY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH KIQVKSAPLGW EEEECCCCCCC >Mature Secondary Structure MKQRKYGKTGKRVSELGFGAWQLGNANKNEWGDLNQDPIRLVHAAIDQGINFFDTAPNYG CCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCC LGASMEYLGKALVGKRADVVINTKFGHNPEGQNFDHKTLKKTVENTLTTLKTDYIDSVLL CCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HSPVIEFCDGEHPVYKVFQELVQEGKILSFGASLDDYQSIHKLVTTTPSNIVMPLYNINF HHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCC QDTGDAFKEAAEKDYGIVVKVPLDSGWLTGKFTDKSRFNDIRSRWSNDDIERRFALQQEL CCCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH LNIIGSEMRLHEAALSFILAQSEVSTVIPGIKNEQQLADNIAASQKTISPELQEKLKEYY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH KIQVKSAPLGW EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]