| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is phoA [H]
Identifier: 119946264
GI number: 119946264
Start: 3222230
End: 3223822
Strand: Reverse
Name: phoA [H]
Synonym: Ping_2627
Alternate gene names: 119946264
Gene position: 3223822-3222230 (Counterclockwise)
Preceding gene: 119946265
Following gene: 119946261
Centisome position: 70.7
GC content: 42.0
Gene sequence:
>1593_bases ATGACAAACTTAAACACAGTTAAAAAAACGTTTTTAGCGCTTTCTATTACTCTTGCGAGTTGTTCAAGCTTTGCAGAAAC ACCCGTTAAAAATGTTATTTTAATGATTGGTGATGGTATGGGCCCCGGACAAATGGGACTTTTAGAAGAATATGCCCGTA AAGCCCCGCATTCTATTTATAATGGCCGTGATACTGCACTTAAAACGATGATAGATAATGGTGTCTTAGGTATGTCACTA CACAGCCCAGCGGATGCTTTAGTAGTGGATTCAGCTTGTTCGGCTTCGCAGTTGGCATCGGGTGTGAGTGCACCTTCTGA AGCCTTAGGCATTGATGTTGATGGTAATCCTGTTGAAAGCGTATTAGAAATCGCTAAAAGTTTAGGTAAAGCGACGGGAC TTGTTTCCGATACTCGTTTAACTCATGCAACTCCCGCTGCATTTGCATCCCATCAACCACACCGTTCATTGGAAAATCAG ATAGCTGAAGAGATGTTGGCAACCCGTGTTGATGTGATGTTGTCGGGTGGGCTGCGTTACTGGATACCGATGTCCGCGAA TGAGGGCGGCGCTGTATATCAAAAACTGCTTAAAAAAACGGGTGGTGATATTAAAATTAAATCTAAACGTATCGATGAAA AAAACCTATTAACAGAAGCTGAAGGTGCAGGTTACGCCGTCGTCCATACGCGTGATGCACTTGCAAACGCGCCGGGCGAT CAGATTCTTGGTTTATTTGCATACTCCGGTATGCAGGATGGTATTACCTATAGCAATACTAAAAACTCGCCAGAGCGTTC CATGCCTAGCCTGAAAGAAATGACCATAAAAGCGCTGGATGTGTTATCCCAAGATCCCGATGGTTTCTTTTTAATGGTTG AAGGGGGGCAGATTGATTGGGCCGGACATAATAACGATGCGGCAACCATGTTACATGAAATGCTTAAATTTGATGAAACA GTCGAATATGTTTATGAATGGGTAAAAAACCGGAAAGATACCTTAGTCGTTGTTACGGCTGACCATGAAACGGGTGGATT TGGTTTTAGTTATTCACGTGCTAATACACCAAAAGCTGAAAAACGAACCGGTATCGCTTTTAAAGATCGTGACTACAAGC CGAATTTCAACTTTGGTAACCTCGCTATTTTAGACAAGTTATATGAGCAGAAAAAAAGTTTTGGCAATATGCTGGCTGAA TTTGATCAAACAGATAAATCGCCTGAATCATTGCTGGCAATAGTGAATGCCAATAGTGAATTTAAGATAAGTCTGGCGCA GGCAAAAGAGATATTAGTGACCGAAGAAAATGAATTTTACGATCCTGAGAACAAATACTTAAAACTTAAAACCTTTCCTA AAGTTAATGATTTTAAAGCCTTTTATGTTTATGGTGAAGAAGTCCGCAATGATTTAATTGGCCGAGCGATGGGCGAAGAG CAGAATATAGTTTGGGGTACTGGCACGCATACGGATACACCCGTTGCAGTGATTGCTTATGGACCCGATCAGGCTACCGC GCCATTTTCGTCTCTTACCCACCATACGGAAATTGGGAAGTTACTTATTAAGACGGTACGGTCTGGACACTAA
Upstream 100 bases:
>100_bases GCTAATATGATTATGATTTTATTTAAATCGTGATTGTCATAAAAATGTCATACATCTCCTTTATAGTCGCCGCCAATAAA TAATACAAAGGACAATATTG
Downstream 100 bases:
>100_bases CGGATTCCATTTTCTTTTTTAATCTGAACAGAGATAAAAAACCAGGGTGAATAATTCACTCTGGTTTTTTAGTCTCTAAC GCATTAATGGAGAGGTAAAA
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase IV; APase IV [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTNLNTVKKTFLALSITLASCSSFAETPVKNVILMIGDGMGPGQMGLLEEYARKAPHSIYNGRDTALKTMIDNGVLGMSL HSPADALVVDSACSASQLASGVSAPSEALGIDVDGNPVESVLEIAKSLGKATGLVSDTRLTHATPAAFASHQPHRSLENQ IAEEMLATRVDVMLSGGLRYWIPMSANEGGAVYQKLLKKTGGDIKIKSKRIDEKNLLTEAEGAGYAVVHTRDALANAPGD QILGLFAYSGMQDGITYSNTKNSPERSMPSLKEMTIKALDVLSQDPDGFFLMVEGGQIDWAGHNNDAATMLHEMLKFDET VEYVYEWVKNRKDTLVVVTADHETGGFGFSYSRANTPKAEKRTGIAFKDRDYKPNFNFGNLAILDKLYEQKKSFGNMLAE FDQTDKSPESLLAIVNANSEFKISLAQAKEILVTEENEFYDPENKYLKLKTFPKVNDFKAFYVYGEEVRNDLIGRAMGEE QNIVWGTGTHTDTPVAVIAYGPDQATAPFSSLTHHTEIGKLLIKTVRSGH
Sequences:
>Translated_530_residues MTNLNTVKKTFLALSITLASCSSFAETPVKNVILMIGDGMGPGQMGLLEEYARKAPHSIYNGRDTALKTMIDNGVLGMSL HSPADALVVDSACSASQLASGVSAPSEALGIDVDGNPVESVLEIAKSLGKATGLVSDTRLTHATPAAFASHQPHRSLENQ IAEEMLATRVDVMLSGGLRYWIPMSANEGGAVYQKLLKKTGGDIKIKSKRIDEKNLLTEAEGAGYAVVHTRDALANAPGD QILGLFAYSGMQDGITYSNTKNSPERSMPSLKEMTIKALDVLSQDPDGFFLMVEGGQIDWAGHNNDAATMLHEMLKFDET VEYVYEWVKNRKDTLVVVTADHETGGFGFSYSRANTPKAEKRTGIAFKDRDYKPNFNFGNLAILDKLYEQKKSFGNMLAE FDQTDKSPESLLAIVNANSEFKISLAQAKEILVTEENEFYDPENKYLKLKTFPKVNDFKAFYVYGEEVRNDLIGRAMGEE QNIVWGTGTHTDTPVAVIAYGPDQATAPFSSLTHHTEIGKLLIKTVRSGH >Mature_529_residues TNLNTVKKTFLALSITLASCSSFAETPVKNVILMIGDGMGPGQMGLLEEYARKAPHSIYNGRDTALKTMIDNGVLGMSLH SPADALVVDSACSASQLASGVSAPSEALGIDVDGNPVESVLEIAKSLGKATGLVSDTRLTHATPAAFASHQPHRSLENQI AEEMLATRVDVMLSGGLRYWIPMSANEGGAVYQKLLKKTGGDIKIKSKRIDEKNLLTEAEGAGYAVVHTRDALANAPGDQ ILGLFAYSGMQDGITYSNTKNSPERSMPSLKEMTIKALDVLSQDPDGFFLMVEGGQIDWAGHNNDAATMLHEMLKFDETV EYVYEWVKNRKDTLVVVTADHETGGFGFSYSRANTPKAEKRTGIAFKDRDYKPNFNFGNLAILDKLYEQKKSFGNMLAEF DQTDKSPESLLAIVNANSEFKISLAQAKEILVTEENEFYDPENKYLKLKTFPKVNDFKAFYVYGEEVRNDLIGRAMGEEQ NIVWGTGTHTDTPVAVIAYGPDQATAPFSSLTHHTEIGKLLIKTVRSGH
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=385, Percent_Identity=29.8701298701299, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI157266292, Length=376, Percent_Identity=31.6489361702128, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI157266296, Length=349, Percent_Identity=30.945558739255, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI294660770, Length=381, Percent_Identity=29.1338582677165, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI294660772, Length=330, Percent_Identity=30.3030303030303, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI94721246, Length=349, Percent_Identity=30.3724928366762, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI48994877, Length=367, Percent_Identity=32.425068119891, Blast_Score=136, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6320689, Length=362, Percent_Identity=34.5303867403315, Blast_Score=162, Evalue=1e-40, Organism=Drosophila melanogaster, GI24585213, Length=360, Percent_Identity=32.5, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI21355151, Length=351, Percent_Identity=29.9145299145299, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI21355981, Length=347, Percent_Identity=29.971181556196, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24651554, Length=350, Percent_Identity=32.2857142857143, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI21358067, Length=365, Percent_Identity=30.4109589041096, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859923, Length=377, Percent_Identity=29.1777188328912, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24651556, Length=303, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI19921912, Length=377, Percent_Identity=29.973474801061, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI21355149, Length=376, Percent_Identity=26.3297872340426, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24657827, Length=349, Percent_Identity=28.6532951289398, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI85725200, Length=353, Percent_Identity=26.3456090651558, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI85815833, Length=353, Percent_Identity=26.3456090651558, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24657835, Length=351, Percent_Identity=27.3504273504274, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI24657842, Length=352, Percent_Identity=26.4204545454545, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 57814; Mature: 57683
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLNTVKKTFLALSITLASCSSFAETPVKNVILMIGDGMGPGQMGLLEEYARKAPHSIY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHC NGRDTALKTMIDNGVLGMSLHSPADALVVDSACSASQLASGVSAPSEALGIDVDGNPVES CCCHHHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHCCCCCHHHEEECCCCCHHHH VLEIAKSLGKATGLVSDTRLTHATPAAFASHQPHRSLENQIAEEMLATRVDVMLSGGLRY HHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCEEE WIPMSANEGGAVYQKLLKKTGGDIKIKSKRIDEKNLLTEAEGAGYAVVHTRDALANAPGD EEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCCEEEEEEHHHHCCCCCH QILGLFAYSGMQDGITYSNTKNSPERSMPSLKEMTIKALDVLSQDPDGFFLMVEGGQIDW HHHHHHHHCCCCCCCEECCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE AGHNNDAATMLHEMLKFDETVEYVYEWVKNRKDTLVVVTADHETGGFGFSYSRANTPKAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCCHH KRTGIAFKDRDYKPNFNFGNLAILDKLYEQKKSFGNMLAEFDQTDKSPESLLAIVNANSE HHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC FKISLAQAKEILVTEENEFYDPENKYLKLKTFPKVNDFKAFYVYGEEVRNDLIGRAMGEE EEEEHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHHHHHHCCCC QNIVWGTGTHTDTPVAVIAYGPDQATAPFSSLTHHTEIGKLLIKTVRSGH CCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNLNTVKKTFLALSITLASCSSFAETPVKNVILMIGDGMGPGQMGLLEEYARKAPHSIY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHC NGRDTALKTMIDNGVLGMSLHSPADALVVDSACSASQLASGVSAPSEALGIDVDGNPVES CCCHHHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHCCCCCHHHEEECCCCCHHHH VLEIAKSLGKATGLVSDTRLTHATPAAFASHQPHRSLENQIAEEMLATRVDVMLSGGLRY HHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCEEE WIPMSANEGGAVYQKLLKKTGGDIKIKSKRIDEKNLLTEAEGAGYAVVHTRDALANAPGD EEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCCEEEEEEHHHHCCCCCH QILGLFAYSGMQDGITYSNTKNSPERSMPSLKEMTIKALDVLSQDPDGFFLMVEGGQIDW HHHHHHHHCCCCCCCEECCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE AGHNNDAATMLHEMLKFDETVEYVYEWVKNRKDTLVVVTADHETGGFGFSYSRANTPKAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCCHH KRTGIAFKDRDYKPNFNFGNLAILDKLYEQKKSFGNMLAEFDQTDKSPESLLAIVNANSE HHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC FKISLAQAKEILVTEENEFYDPENKYLKLKTFPKVNDFKAFYVYGEEVRNDLIGRAMGEE EEEEHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHHHHHHCCCC QNIVWGTGTHTDTPVAVIAYGPDQATAPFSSLTHHTEIGKLLIKTVRSGH CCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8113174; 9579061; 9384377; 1898729; 2125017; 2105301; 8144469 [H]