| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is lpp [C]
Identifier: 119946261
GI number: 119946261
Start: 3217073
End: 3217318
Strand: Reverse
Name: lpp [C]
Synonym: Ping_2623
Alternate gene names: 119946261
Gene position: 3217318-3217073 (Counterclockwise)
Preceding gene: 119946264
Following gene: 119946259
Centisome position: 70.56
GC content: 34.15
Gene sequence:
>246_bases ATGAACAAAAAATTACTAATTACTGGTGCTGTAGCATCAATTGTTTTACTTGCTGGTTGTTCAAATCACGATGACATGAA CGAAAGTATGTCTAACCTTACTAATCAAGTAAGTGAATTATCAGCAAAAGTTGATATGGTAGCAGACGATCAAGCATCCA TGAAAGCAGATCTAGCAACTGTTGCTGGTGAAGCAGAACGTGCAAATTCACGTATTGATAATATTGCTACTTCTTATAAA AAATAA
Upstream 100 bases:
>100_bases CGGACACTTAACTGGCGAAATTGTAAACATATTACATACTTAGTCAGAGTACATAAAAATGTACACTGGTGTTACCCTAA CTCAATAAAAGAGGTTTTCT
Downstream 100 bases:
>100_bases TGCGTTAAAAAACAATAAAAAAAGTGGGTGTTAACCCACTTTTTTATTATTCGGACTCTATAACGACCGGTATTCCCTGA TGTAATAACAAGGCTTCTGT
Product: major outer membrane lipoprotein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MNKKLLITGAVASIVLLAGCSNHDDMNESMSNLTNQVSELSAKVDMVADDQASMKADLATVAGEAERANSRIDNIATSYK K
Sequences:
>Translated_81_residues MNKKLLITGAVASIVLLAGCSNHDDMNESMSNLTNQVSELSAKVDMVADDQASMKADLATVAGEAERANSRIDNIATSYK K >Mature_81_residues MNKKLLITGAVASIVLLAGCSNHDDMNESMSNLTNQVSELSAKVDMVADDQASMKADLATVAGEAERANSRIDNIATSYK K
Specific function: Unknown
COG id: COG4238
COG function: function code M; Murein lipoprotein
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8588; Mature: 8588
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLITGAVASIVLLAGCSNHDDMNESMSNLTNQVSELSAKVDMVADDQASMKADLAT CCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VAGEAERANSRIDNIATSYKK HHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKKLLITGAVASIVLLAGCSNHDDMNESMSNLTNQVSELSAKVDMVADDQASMKADLAT CCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VAGEAERANSRIDNIATSYKK HHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA