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The map label for this gene is 119946258

Identifier: 119946258

GI number: 119946258

Start: 3213301

End: 3214149

Strand: Reverse

Name: 119946258

Synonym: Ping_2620

Alternate gene names: NA

Gene position: 3214149-3213301 (Counterclockwise)

Preceding gene: 119946259

Following gene: 119946257

Centisome position: 70.49

GC content: 41.46

Gene sequence:

>849_bases
GTGTTTGACTATACTTATCAGATAATCTCAATCAGCTTTGTAGTTATCCGTGAGATGGAGGTGTGTATGAAATACAGAAC
TGCGGCAGTCGCAGGCAGTTTTTATCCTGCGACTGCGGATCAAATTGATCAGGAGCTCAGTGTTTTTTTAAACGCACCGA
GCGAGTCTACTACCCAAGCAAAGGCGTTAATTGTACCGCATGCGGGTTATTGTTATTCTGGTGCGGTTGCGGGTTACGCC
TATTCTTACCTTAAAAATATTGCGCATAATATTAACCGCGTTATTTTACTCGGGCCCAGCCATCGAGTTGCCTTGCAAGG
TTGTGCTATTTCCAGCTGTGATTTCTTTACTACACCCATTGGGCCGATACCCGTAGATAAAAGCGCTTATACTCAACTGC
TGGATGAAAAACTGGTAACCATCAACGATCAAGCGCATTTGTTAGAACACTCATTAGAAGTACAACTGCCATTTTTACAA
CGTTCTTTACAAAATTTCGTGCTTGTTCCAATAGTGGTGGGGCAGTGTTCAGTGCAACATGTCAGTCAAATTTTAGAAAT
ATTAAAGGTTAATGAACCTGGCACGCTGGTCGTGGTAAGTTCAGATCTTAGCCATTATCATCCTTACCAAGAAGCTCAGC
TTTTAGATAATAGGACCATCCAGCATATCTTAAACTATGAGGATCATTTAAGCGGTCAAGGTGCTTGTGGTTGTTATGCC
GTTAATGGTTTGCTGAGTTATGCCAAAAAACAACACTGGCCTATTAAGTTGCTTAAAAAAGCCAACTCTGGAGATACTTT
TGGCAGTAAAAAAGAGGTGGTGGGTTATGCCAGTTTCATCTTATATTAG

Upstream 100 bases:

>100_bases
TTTAAAGTATAAAATATTTTTTATCCGTTTCCATTTGCGCTCTTGTTGCAATTTTAGGTTTGAAAAATAATTTTGCTTTG
ATTTTTTATCTGTTCATTTC

Downstream 100 bases:

>100_bases
TTTAAGCCGTGAAGCGCAGGCAGAACTTAAACAATTGGTTTGGCAGGTGCTTGATAAGGCTGTTGAAGATCGAACCATGC
TACAACCTGCTCCCCCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MFDYTYQIISISFVVIREMEVCMKYRTAAVAGSFYPATADQIDQELSVFLNAPSESTTQAKALIVPHAGYCYSGAVAGYA
YSYLKNIAHNINRVILLGPSHRVALQGCAISSCDFFTTPIGPIPVDKSAYTQLLDEKLVTINDQAHLLEHSLEVQLPFLQ
RSLQNFVLVPIVVGQCSVQHVSQILEILKVNEPGTLVVVSSDLSHYHPYQEAQLLDNRTIQHILNYEDHLSGQGACGCYA
VNGLLSYAKKQHWPIKLLKKANSGDTFGSKKEVVGYASFILY

Sequences:

>Translated_282_residues
MFDYTYQIISISFVVIREMEVCMKYRTAAVAGSFYPATADQIDQELSVFLNAPSESTTQAKALIVPHAGYCYSGAVAGYA
YSYLKNIAHNINRVILLGPSHRVALQGCAISSCDFFTTPIGPIPVDKSAYTQLLDEKLVTINDQAHLLEHSLEVQLPFLQ
RSLQNFVLVPIVVGQCSVQHVSQILEILKVNEPGTLVVVSSDLSHYHPYQEAQLLDNRTIQHILNYEDHLSGQGACGCYA
VNGLLSYAKKQHWPIKLLKKANSGDTFGSKKEVVGYASFILY
>Mature_282_residues
MFDYTYQIISISFVVIREMEVCMKYRTAAVAGSFYPATADQIDQELSVFLNAPSESTTQAKALIVPHAGYCYSGAVAGYA
YSYLKNIAHNINRVILLGPSHRVALQGCAISSCDFFTTPIGPIPVDKSAYTQLLDEKLVTINDQAHLLEHSLEVQLPFLQ
RSLQNFVLVPIVVGQCSVQHVSQILEILKVNEPGTLVVVSSDLSHYHPYQEAQLLDNRTIQHILNYEDHLSGQGACGCYA
VNGLLSYAKKQHWPIKLLKKANSGDTFGSKKEVVGYASFILY

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=212, Percent_Identity=33.0188679245283, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI212286159, Length=211, Percent_Identity=27.9620853080569, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32566861, Length=186, Percent_Identity=36.0215053763441, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25146594, Length=206, Percent_Identity=33.495145631068, Blast_Score=121, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6322467, Length=204, Percent_Identity=30.3921568627451, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21357419, Length=191, Percent_Identity=32.9842931937173, Blast_Score=114, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 31207; Mature: 31207

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDYTYQIISISFVVIREMEVCMKYRTAAVAGSFYPATADQIDQELSVFLNAPSESTTQA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCCCCE
KALIVPHAGYCYSGAVAGYAYSYLKNIAHNINRVILLGPSHRVALQGCAISSCDFFTTPI
EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCEECCCCCCCCCC
GPIPVDKSAYTQLLDEKLVTINDQAHLLEHSLEVQLPFLQRSLQNFVLVPIVVGQCSVQH
CCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHEEEHHHHHHHHCEEEEEEEECCCCHHH
VSQILEILKVNEPGTLVVVSSDLSHYHPYQEAQLLDNRTIQHILNYEDHLSGQGACGCYA
HHHHHHHHCCCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHH
VNGLLSYAKKQHWPIKLLKKANSGDTFGSKKEVVGYASFILY
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFDYTYQIISISFVVIREMEVCMKYRTAAVAGSFYPATADQIDQELSVFLNAPSESTTQA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCCCCE
KALIVPHAGYCYSGAVAGYAYSYLKNIAHNINRVILLGPSHRVALQGCAISSCDFFTTPI
EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCEECCCCCCCCCC
GPIPVDKSAYTQLLDEKLVTINDQAHLLEHSLEVQLPFLQRSLQNFVLVPIVVGQCSVQH
CCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHEEEHHHHHHHHCEEEEEEEECCCCHHH
VSQILEILKVNEPGTLVVVSSDLSHYHPYQEAQLLDNRTIQHILNYEDHLSGQGACGCYA
HHHHHHHHCCCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHH
VNGLLSYAKKQHWPIKLLKKANSGDTFGSKKEVVGYASFILY
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]