BacMap

Definition	Psychromonas ingrahamii 37, complete genome.
Accession	NC_008709
Length	4,559,598

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The map label for this gene is dnaJ [H]

Identifier: 119946259

GI number: 119946259

Start: 3214531

End: 3215382

Strand: Reverse

Name: dnaJ [H]

Synonym: Ping_2621

Alternate gene names: 119946259

Gene position: 3215382-3214531 (Counterclockwise)

Preceding gene: 119946261

Following gene: 119946258

Centisome position: 70.52

GC content: 39.79

Gene sequence:

>852_bases
ATGTCAAAACGTGATTGTTATGAAGTGCTTGGTGTTGATAAAAGCGCAACAGATGTAGAAATAAAAAAAGCGTATAAAAA
ATTAGCGATGAAATTCCACCCGGATCGTAATCCTGGTAATCCTGTTGCACAGGATAGTTTTAGAGAAGTAAAATCTTCCT
ATGAGATTCTTTCTGATCCTGAAAAAAGACAGGAATATGATGATTTTGGTCATCAGGCATTTGATCCCAGCCACCGGGCA
AATTCTGGTTTTAATCGCCAGGGTGGATTTGGGCAATCTTCAGGTGATTATAATGATATTTTTGGTGATATGTTCAGACA
ACGTCATCAACCAAGACCTGAAAAGGGATCTGATTTACGTTATCGTATAAAACTAACCCTGGAAGAGGCCGTTAATGGTT
GCCAGAAAGAGGTTAAACTCCCCAATACAGAGCAATTTCTAAAGGTGACTATTCCCGCCGGTATTGATGAGGGACAAAGT
GTTCGTCTTGCAAATAAAGGTAACCCAGGAACCTTAGGTGCCGAAAATGGTGATTTGCTCGTAGAAATCAACCTTATTAA
GCATGCGTTATTTGACCGTCAAGGAATGGACTTACATTGTTTAATACCCGTCTCTTTTCCAACGGCGGCATTAGGAGGAA
CAATAGAAGCGCCTACCTTCGATGGACATATCAGCTTTAAGATACCCAAGGGAACACAAGCTGGGCGAAAATTTCGCATT
AAAGGCAAGGGTATTAAGGCAATAAAAAATGATGTTAAAGGTGACTTGATTTATGAAGTTGTCATTAACACGCCAACCAG
TCTCACTGAAGAACAGGAAAATTTACTCACAGAATTAGCTAAGACGTTGTAA

Upstream 100 bases:

>100_bases
GGGATCATTAGCCTTCTGCTTAGAATATTATCATTTCTCGTCTTGCTGATGCCTGCATCTTCAAGTGATTTGGGTATAAT
AATAATTTTGAGAAATAAAC

Downstream 100 bases:

>100_bases
ATTAATTATATTTAATGATACTTGCATTGATACCGATGACGCTAAAAAATATCAACCAGAGGCCAGAAATTTGGGATATG
AATACATTTTTTATTACTGA

Product: chaperone DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSKRDCYEVLGVDKSATDVEIKKAYKKLAMKFHPDRNPGNPVAQDSFREVKSSYEILSDPEKRQEYDDFGHQAFDPSHRA
NSGFNRQGGFGQSSGDYNDIFGDMFRQRHQPRPEKGSDLRYRIKLTLEEAVNGCQKEVKLPNTEQFLKVTIPAGIDEGQS
VRLANKGNPGTLGAENGDLLVEINLIKHALFDRQGMDLHCLIPVSFPTAALGGTIEAPTFDGHISFKIPKGTQAGRKFRI
KGKGIKAIKNDVKGDLIYEVVINTPTSLTEEQENLLTELAKTL

Sequences:

>Translated_283_residues
MSKRDCYEVLGVDKSATDVEIKKAYKKLAMKFHPDRNPGNPVAQDSFREVKSSYEILSDPEKRQEYDDFGHQAFDPSHRA
NSGFNRQGGFGQSSGDYNDIFGDMFRQRHQPRPEKGSDLRYRIKLTLEEAVNGCQKEVKLPNTEQFLKVTIPAGIDEGQS
VRLANKGNPGTLGAENGDLLVEINLIKHALFDRQGMDLHCLIPVSFPTAALGGTIEAPTFDGHISFKIPKGTQAGRKFRI
KGKGIKAIKNDVKGDLIYEVVINTPTSLTEEQENLLTELAKTL
>Mature_282_residues
SKRDCYEVLGVDKSATDVEIKKAYKKLAMKFHPDRNPGNPVAQDSFREVKSSYEILSDPEKRQEYDDFGHQAFDPSHRAN
SGFNRQGGFGQSSGDYNDIFGDMFRQRHQPRPEKGSDLRYRIKLTLEEAVNGCQKEVKLPNTEQFLKVTIPAGIDEGQSV
RLANKGNPGTLGAENGDLLVEINLIKHALFDRQGMDLHCLIPVSFPTAALGGTIEAPTFDGHISFKIPKGTQAGRKFRIK
GKGIKAIKNDVKGDLIYEVVINTPTSLTEEQENLLTELAKTL

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI7706495, Length=330, Percent_Identity=32.1212121212121, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI6631085, Length=333, Percent_Identity=28.8288288288288, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI5453690, Length=337, Percent_Identity=23.7388724035608, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI201862518, Length=349, Percent_Identity=26.647564469914, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI56549115, Length=349, Percent_Identity=26.647564469914, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI201862587, Length=349, Percent_Identity=26.647564469914, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI205360838, Length=149, Percent_Identity=34.8993288590604, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI205360840, Length=149, Percent_Identity=34.8993288590604, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI9558755, Length=106, Percent_Identity=42.4528301886792, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI39204547, Length=317, Percent_Identity=24.6056782334385, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI72534740, Length=82, Percent_Identity=48.780487804878, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI45504382, Length=69, Percent_Identity=52.1739130434783, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI194306642, Length=67, Percent_Identity=50.7462686567164, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI194306640, Length=67, Percent_Identity=50.7462686567164, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI194328760, Length=138, Percent_Identity=37.6811594202899, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI194328758, Length=138, Percent_Identity=37.6811594202899, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4504511, Length=138, Percent_Identity=35.5072463768116, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI24308127, Length=101, Percent_Identity=38.6138613861386, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI22749377, Length=69, Percent_Identity=49.2753623188406, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI17388799, Length=105, Percent_Identity=41.9047619047619, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4885495, Length=105, Percent_Identity=41.9047619047619, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21553335, Length=105, Percent_Identity=40, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI5031741, Length=68, Percent_Identity=50, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=50, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI56687498, Length=66, Percent_Identity=53.030303030303, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI23503241, Length=100, Percent_Identity=41, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI47777312, Length=102, Percent_Identity=40.1960784313725, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI27151736, Length=69, Percent_Identity=46.3768115942029, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI88501736, Length=69, Percent_Identity=46.3768115942029, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI68077168, Length=101, Percent_Identity=37.6237623762376, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI68077166, Length=101, Percent_Identity=37.6237623762376, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI119943096, Length=61, Percent_Identity=45.9016393442623, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI118498347, Length=74, Percent_Identity=45.945945945946, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI8922563, Length=63, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787235, Length=300, Percent_Identity=37, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1786197, Length=290, Percent_Identity=35.1724137931034, Blast_Score=151, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI212645553, Length=325, Percent_Identity=30.1538461538462, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534355, Length=329, Percent_Identity=27.0516717325228, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17554644, Length=117, Percent_Identity=41.8803418803419, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI115532378, Length=99, Percent_Identity=46.4646464646465, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17553096, Length=153, Percent_Identity=30.718954248366, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17553098, Length=153, Percent_Identity=30.718954248366, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17568643, Length=66, Percent_Identity=50, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538236, Length=88, Percent_Identity=42.0454545454545, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17507263, Length=61, Percent_Identity=52.4590163934426, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115532476, Length=87, Percent_Identity=41.3793103448276, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554874, Length=62, Percent_Identity=48.3870967741936, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=144, Percent_Identity=40.9722222222222, Blast_Score=96, Evalue=9e-21,
Organism=Saccharomyces cerevisiae, GI6323813, Length=102, Percent_Identity=45.0980392156863, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322194, Length=96, Percent_Identity=36.4583333333333, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320888, Length=98, Percent_Identity=40.8163265306122, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323870, Length=70, Percent_Identity=50, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6324103, Length=72, Percent_Identity=44.4444444444444, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6323119, Length=85, Percent_Identity=47.0588235294118, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=68, Percent_Identity=44.1176470588235, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24658562, Length=339, Percent_Identity=28.3185840707965, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24658555, Length=339, Percent_Identity=28.3185840707965, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19920464, Length=325, Percent_Identity=28.6153846153846, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI18858081, Length=341, Percent_Identity=26.099706744868, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI85726398, Length=102, Percent_Identity=42.156862745098, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=55.2238805970149, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=55.2238805970149, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=55.2238805970149, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=55.2238805970149, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI20129487, Length=143, Percent_Identity=37.7622377622378, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24584014, Length=143, Percent_Identity=37.7622377622378, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=54.6875, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=56.25, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=54.6875, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=54.6875, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45552813, Length=70, Percent_Identity=51.4285714285714, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI45549272, Length=70, Percent_Identity=51.4285714285714, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21358273, Length=67, Percent_Identity=53.7313432835821, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45552811, Length=70, Percent_Identity=51.4285714285714, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21355911, Length=92, Percent_Identity=41.304347826087, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24646562, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24646560, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24646558, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24646556, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21357547, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=40.5797101449275, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24641698, Length=63, Percent_Identity=44.4444444444444, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641696, Length=63, Percent_Identity=44.4444444444444, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24584630, Length=108, Percent_Identity=37.962962962963, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17648033, Length=108, Percent_Identity=37.962962962963, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643180, Length=94, Percent_Identity=32.9787234042553, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 31494; Mature: 31363

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRDCYEVLGVDKSATDVEIKKAYKKLAMKFHPDRNPGNPVAQDSFREVKSSYEILSDP
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
EKRQEYDDFGHQAFDPSHRANSGFNRQGGFGQSSGDYNDIFGDMFRQRHQPRPEKGSDLR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
YRIKLTLEEAVNGCQKEVKLPNTEQFLKVTIPAGIDEGQSVRLANKGNPGTLGAENGDLL
EEEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEE
VEINLIKHALFDRQGMDLHCLIPVSFPTAALGGTIEAPTFDGHISFKIPKGTQAGRKFRI
EEEHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCEECCCCCCEEEEEECCCCCCCCEEEE
KGKGIKAIKNDVKGDLIYEVVINTPTSLTEEQENLLTELAKTL
ECCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SKRDCYEVLGVDKSATDVEIKKAYKKLAMKFHPDRNPGNPVAQDSFREVKSSYEILSDP
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
EKRQEYDDFGHQAFDPSHRANSGFNRQGGFGQSSGDYNDIFGDMFRQRHQPRPEKGSDLR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
YRIKLTLEEAVNGCQKEVKLPNTEQFLKVTIPAGIDEGQSVRLANKGNPGTLGAENGDLL
EEEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEE
VEINLIKHALFDRQGMDLHCLIPVSFPTAALGGTIEAPTFDGHISFKIPKGTQAGRKFRI
EEEHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCEECCCCCCEEEEEECCCCCCCCEEEE
KGKGIKAIKNDVKGDLIYEVVINTPTSLTEEQENLLTELAKTL
ECCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]