| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946239
Identifier: 119946239
GI number: 119946239
Start: 3191773
End: 3192999
Strand: Reverse
Name: 119946239
Synonym: Ping_2601
Alternate gene names: NA
Gene position: 3192999-3191773 (Counterclockwise)
Preceding gene: 119946240
Following gene: 119946238
Centisome position: 70.03
GC content: 39.77
Gene sequence:
>1227_bases ATGGCTGATTTTTATCAAAACGGTATTGTTACTACCCTGCATAGTTTGTCGCAGCGAAGTAATGAGGATCTTGAAGCAGA ATTATTGAAATTTTCAGCTATACGACCGATGGGGCTGATCTTACCCTCTTTATATTCCGAGTTAGAGGGAAAGGCGTTAC CCGCTATCATTAAACATTTAAGTAAAACAAAATATTTATCAGAAATTGTGATCGGTTTAGACCAAGCTGATGAAGCACAA TATCGCCAGGCTTTGAAGTTTTTCAGCAAATTACCCCAGCAGCACAGCGTATTATGGAATGACGGCCCGAGATTACAGGC ATTAGATGCAAAACTGCAGAAATTGGGCGTTGCGCCAAAAGAGTTAGGAAAAGGGCGTAATGTTTGGTATTGCATGGGGT ATACATTAGCGACAGGTAGAAGTGAATCCGTGGCATTACATGATTGTGATATTTTAACCTATGACAGAAAACTTCTGGCG CGATTACTTTATCCTGTTGCCAATCCGCAATTTAATTATGAATTCTGTAAAGGTTTTTATGCGCGTGTCGCGGGTGGCAA AATTAACGGACGAGTTTCGCGGTTACTGGTCACTCCTTTGGTTAAAGCCCTCAAAAAAACGGTCGGGCACCACGATTATT TAGAGTTTATTGATAGTTTTCTTTATCCGCTTGCCGGTGAGTTTTCATTCCGTCGTGATGTATTAAATGATTTGCGTATT CCAAGTGATTGGGGATTAGAAATTGGCGTACTATCAGAAATGCATCGTAATTACGCCAGCAACCGAATCTGTCAGGTAGA TATTGCAACGACCTATGATCACAAGCATCAAGATCTGTCTCTTGAAAATAGTGAAGCCGGATTATCAAAAATGTCCGTTG ATATTACTAAAGCATTTTTTCGCAAACTGGCAACCCAAGGGGAAATTTTTAGTACTGAGAATATCCGTACTCTTAAAGCC ACCTATTATCGGATCGCACTCGATTATGTGGAGATGTATCATAATGATGCTCTGATGAATGGTTTGACCGTGGATATACA TAATGAAGAGAAAGCGGTGGAAATGTTTTCTGAAAATATTATGACAGCAGGACAGCAATTTTTAGATAAGCCAATGGATA CACCTTTTATCCCTTCATGGAACAGAGTCGTCAGTGCAATGCCCGATGTGTTAGAGCAACTTAAAGAGGCGGTGGAGTTA GATAAAATTGAATTTAGTAATAATTAA
Upstream 100 bases:
>100_bases AGAGAAAATGAACTTTATTTTAGTCGTGAATATGGGCCTGCCGGATGGGCGGAATGTTTACAAAAAATAATTTTTTAAAC TGCAATTAAGGAGCTCTATT
Downstream 100 bases:
>100_bases TCATCAAAGGAAATTTATGTCTGATTTTAAGCGCAAAGCAAAATCATTAAAAAATTGTCAAAAGAAATTAAATCAACAGC TGGAAAGTATCTATCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase-Like Protein; Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Glycosyltransferase Family Protein; Glucosyl-3-Phosphoglycerate Synthase; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MADFYQNGIVTTLHSLSQRSNEDLEAELLKFSAIRPMGLILPSLYSELEGKALPAIIKHLSKTKYLSEIVIGLDQADEAQ YRQALKFFSKLPQQHSVLWNDGPRLQALDAKLQKLGVAPKELGKGRNVWYCMGYTLATGRSESVALHDCDILTYDRKLLA RLLYPVANPQFNYEFCKGFYARVAGGKINGRVSRLLVTPLVKALKKTVGHHDYLEFIDSFLYPLAGEFSFRRDVLNDLRI PSDWGLEIGVLSEMHRNYASNRICQVDIATTYDHKHQDLSLENSEAGLSKMSVDITKAFFRKLATQGEIFSTENIRTLKA TYYRIALDYVEMYHNDALMNGLTVDIHNEEKAVEMFSENIMTAGQQFLDKPMDTPFIPSWNRVVSAMPDVLEQLKEAVEL DKIEFSNN
Sequences:
>Translated_408_residues MADFYQNGIVTTLHSLSQRSNEDLEAELLKFSAIRPMGLILPSLYSELEGKALPAIIKHLSKTKYLSEIVIGLDQADEAQ YRQALKFFSKLPQQHSVLWNDGPRLQALDAKLQKLGVAPKELGKGRNVWYCMGYTLATGRSESVALHDCDILTYDRKLLA RLLYPVANPQFNYEFCKGFYARVAGGKINGRVSRLLVTPLVKALKKTVGHHDYLEFIDSFLYPLAGEFSFRRDVLNDLRI PSDWGLEIGVLSEMHRNYASNRICQVDIATTYDHKHQDLSLENSEAGLSKMSVDITKAFFRKLATQGEIFSTENIRTLKA TYYRIALDYVEMYHNDALMNGLTVDIHNEEKAVEMFSENIMTAGQQFLDKPMDTPFIPSWNRVVSAMPDVLEQLKEAVEL DKIEFSNN >Mature_407_residues ADFYQNGIVTTLHSLSQRSNEDLEAELLKFSAIRPMGLILPSLYSELEGKALPAIIKHLSKTKYLSEIVIGLDQADEAQY RQALKFFSKLPQQHSVLWNDGPRLQALDAKLQKLGVAPKELGKGRNVWYCMGYTLATGRSESVALHDCDILTYDRKLLAR LLYPVANPQFNYEFCKGFYARVAGGKINGRVSRLLVTPLVKALKKTVGHHDYLEFIDSFLYPLAGEFSFRRDVLNDLRIP SDWGLEIGVLSEMHRNYASNRICQVDIATTYDHKHQDLSLENSEAGLSKMSVDITKAFFRKLATQGEIFSTENIRTLKAT YYRIALDYVEMYHNDALMNGLTVDIHNEEKAVEMFSENIMTAGQQFLDKPMDTPFIPSWNRVVSAMPDVLEQLKEAVELD KIEFSNN
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46379; Mature: 46247
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFYQNGIVTTLHSLSQRSNEDLEAELLKFSAIRPMGLILPSLYSELEGKALPAIIKHL CCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH SKTKYLSEIVIGLDQADEAQYRQALKFFSKLPQQHSVLWNDGPRLQALDAKLQKLGVAPK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHCCCHH ELGKGRNVWYCMGYTLATGRSESVALHDCDILTYDRKLLARLLYPVANPQFNYEFCKGFY HHCCCCCEEEEECEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ARVAGGKINGRVSRLLVTPLVKALKKTVGHHDYLEFIDSFLYPLAGEFSFRRDVLNDLRI HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC PSDWGLEIGVLSEMHRNYASNRICQVDIATTYDHKHQDLSLENSEAGLSKMSVDITKAFF CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RKLATQGEIFSTENIRTLKATYYRIALDYVEMYHNDALMNGLTVDIHNEEKAVEMFSENI HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH MTAGQQFLDKPMDTPFIPSWNRVVSAMPDVLEQLKEAVELDKIEFSNN HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADFYQNGIVTTLHSLSQRSNEDLEAELLKFSAIRPMGLILPSLYSELEGKALPAIIKHL CCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH SKTKYLSEIVIGLDQADEAQYRQALKFFSKLPQQHSVLWNDGPRLQALDAKLQKLGVAPK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHCCCHH ELGKGRNVWYCMGYTLATGRSESVALHDCDILTYDRKLLARLLYPVANPQFNYEFCKGFY HHCCCCCEEEEECEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ARVAGGKINGRVSRLLVTPLVKALKKTVGHHDYLEFIDSFLYPLAGEFSFRRDVLNDLRI HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC PSDWGLEIGVLSEMHRNYASNRICQVDIATTYDHKHQDLSLENSEAGLSKMSVDITKAFF CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RKLATQGEIFSTENIRTLKATYYRIALDYVEMYHNDALMNGLTVDIHNEEKAVEMFSENI HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH MTAGQQFLDKPMDTPFIPSWNRVVSAMPDVLEQLKEAVELDKIEFSNN HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA