| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yedP [H]
Identifier: 119946240
GI number: 119946240
Start: 3193022
End: 3193837
Strand: Reverse
Name: yedP [H]
Synonym: Ping_2602
Alternate gene names: 119946240
Gene position: 3193837-3193022 (Counterclockwise)
Preceding gene: 119946241
Following gene: 119946239
Centisome position: 70.05
GC content: 38.97
Gene sequence:
>816_bases ATGAATAAAAAAATGCTCATATTTACAGATTTAGATGGCACATTACTTGACCATTACACTTATCAGACCCGAGCTGCAGA TTGTACTATTAAAAATCTTAAAGAAAAGAATATCCCCATTATACCCAACACCAGCAAAACCCTTGCTGAAGTGCTACTAA TTCGAGCAGATTTAAAACTTGAGACACCTTTTATTATTGAAAATGGTGCAGCTGTTTACATACCGGTTAACTATTTTAGC ATACAACCCGATGGCACCCAGTTGGAAAATGGATTTTGGGTTAAATCATTTTGTCAAAAAAAGGATTTTTGGCTGTCTTT ATTAAGCGCGGAAGCAAGGCAATTTAAGACTCATTTTCGTGGCTTTTCACAAATGAGAGCGCAGCAACTGGCTGATTTAA CCGGGCTCAGTATAACGGATGCAGGATTAGCTAAACGGCGTCAATTTGGTGAGCCTGTTGACTGGTTAGGCAGTCAACAA TCTCAAGATGATTTTATTAAACACATGCATCTGTTAGGTGCCAATGTGCTTGAAGGAGGACGATTTTTACATATCAGCGG AAATTGTGACAAAGGACAGGCACAATCCTGGTTGGCGCAGCAGTATAAAATTAATCAACCTGAACGGGGATTGACTGTTA TTGCATTGGGCGATAGTGATAATGATACGGCAATGCTAGAAGCCGCTGATATTGCTGTTGTAGTGCGTTCTCCTGTACAT GCTTTTCCAATCTTACAAAGAGAAAATGAACTTTATTTTAGTCGTGAATATGGGCCTGCCGGATGGGCGGAATGTTTACA AAAAATAATTTTTTAA
Upstream 100 bases:
>100_bases CTGTTCATGTTTTTTATGTAGAAAAACTAATCAGCCCGGATGTCTATCCTGTGGAGTTGTATGACAGGTAGATAATAGTC GCTTTAAAAAGTGGGGACCT
Downstream 100 bases:
>100_bases ACTGCAATTAAGGAGCTCTATTATGGCTGATTTTTATCAAAACGGTATTGTTACTACCCTGCATAGTTTGTCGCAGCGAA GTAATGAGGATCTTGAAGCA
Product: mannosyl-3-phosphoglycerate phosphatase
Products: NA
Alternate protein names: MPGP [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNKKMLIFTDLDGTLLDHYTYQTRAADCTIKNLKEKNIPIIPNTSKTLAEVLLIRADLKLETPFIIENGAAVYIPVNYFS IQPDGTQLENGFWVKSFCQKKDFWLSLLSAEARQFKTHFRGFSQMRAQQLADLTGLSITDAGLAKRRQFGEPVDWLGSQQ SQDDFIKHMHLLGANVLEGGRFLHISGNCDKGQAQSWLAQQYKINQPERGLTVIALGDSDNDTAMLEAADIAVVVRSPVH AFPILQRENELYFSREYGPAGWAECLQKIIF
Sequences:
>Translated_271_residues MNKKMLIFTDLDGTLLDHYTYQTRAADCTIKNLKEKNIPIIPNTSKTLAEVLLIRADLKLETPFIIENGAAVYIPVNYFS IQPDGTQLENGFWVKSFCQKKDFWLSLLSAEARQFKTHFRGFSQMRAQQLADLTGLSITDAGLAKRRQFGEPVDWLGSQQ SQDDFIKHMHLLGANVLEGGRFLHISGNCDKGQAQSWLAQQYKINQPERGLTVIALGDSDNDTAMLEAADIAVVVRSPVH AFPILQRENELYFSREYGPAGWAECLQKIIF >Mature_271_residues MNKKMLIFTDLDGTLLDHYTYQTRAADCTIKNLKEKNIPIIPNTSKTLAEVLLIRADLKLETPFIIENGAAVYIPVNYFS IQPDGTQLENGFWVKSFCQKKDFWLSLLSAEARQFKTHFRGFSQMRAQQLADLTGLSITDAGLAKRRQFGEPVDWLGSQQ SQDDFIKHMHLLGANVLEGGRFLHISGNCDKGQAQSWLAQQYKINQPERGLTVIALGDSDNDTAMLEAADIAVVVRSPVH AFPILQRENELYFSREYGPAGWAECLQKIIF
Specific function: Unknown
COG id: COG3769
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]
Homologues:
Organism=Escherichia coli, GI1788265, Length=272, Percent_Identity=30.5147058823529, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR006381 - InterPro: IPR000150 - InterPro: IPR012815 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: =3.1.3.70 [H]
Molecular weight: Translated: 30586; Mature: 30586
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKMLIFTDLDGTLLDHYTYQTRAADCTIKNLKEKNIPIIPNTSKTLAEVLLIRADLKL CCCCEEEEECCCCHHHHCEEEHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEE ETPFIIENGAAVYIPVNYFSIQPDGTQLENGFWVKSFCQKKDFWLSLLSAEARQFKTHFR CCCEEEECCCEEEEEEEEEEECCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHH GFSQMRAQQLADLTGLSITDAGLAKRRQFGEPVDWLGSQQSQDDFIKHMHLLGANVLEGG HHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCC RFLHISGNCDKGQAQSWLAQQYKINQPERGLTVIALGDSDNDTAMLEAADIAVVVRSPVH EEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCH AFPILQRENELYFSREYGPAGWAECLQKIIF HHHEEECCCCEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MNKKMLIFTDLDGTLLDHYTYQTRAADCTIKNLKEKNIPIIPNTSKTLAEVLLIRADLKL CCCCEEEEECCCCHHHHCEEEHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEE ETPFIIENGAAVYIPVNYFSIQPDGTQLENGFWVKSFCQKKDFWLSLLSAEARQFKTHFR CCCEEEECCCEEEEEEEEEEECCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHH GFSQMRAQQLADLTGLSITDAGLAKRRQFGEPVDWLGSQQSQDDFIKHMHLLGANVLEGG HHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCC RFLHISGNCDKGQAQSWLAQQYKINQPERGLTVIALGDSDNDTAMLEAADIAVVVRSPVH EEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCH AFPILQRENELYFSREYGPAGWAECLQKIIF HHHEEECCCCEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA