| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ilvE [H]
Identifier: 119946235
GI number: 119946235
Start: 3186510
End: 3187598
Strand: Reverse
Name: ilvE [H]
Synonym: Ping_2596
Alternate gene names: 119946235
Gene position: 3187598-3186510 (Counterclockwise)
Preceding gene: 119946238
Following gene: 119946232
Centisome position: 69.91
GC content: 42.33
Gene sequence:
>1089_bases ATGATAATTGATATTAAACCGCTTGAGCTTTCCAAGCGGGGGGCTTGTCCAGAAACTTACAGTTTTGGAGCTGATTTTTC TGACCATATGTTTAGCCAAAATTTTGAACAAGGCAGCGGTTGGGAGAAAGCTGAAATTACCCCTTATCATGCATTAACAC TTGATCCTTCAGCGGCTGTATTTCATTACGGACAAGAAATATTTGAAGGTTTAAAGGCTTACCGTTCATTCGATGGAACG ATTAATTTGTTTCGTCCTTCTGAAAATTTCAAACGTTTTAACCGTTCAGCTAAAAGAATGGCGATGCCCGAAATAGATGG AAAATTTCACCTGAAAGCACTTAAAGCGCTTATCTCGCTTGATCATAATTGGATTCCGGAGCAAGTGGGATCGTCTTTAT ATATCCGCCCGACAATGATTGCGACGGGTAAAAAGTTGGGTTTAGGGGCGAGTGATTCCTATATTCACTTTATTATCACG GGGCCAGCCGGATCTTACTTCAAGGGTGGTTTTGAGCCGGTATCGGTTTATATTGCCGATAAGTATCGCCGCGCAGTAGT GGGGGGAGTGGGTGAAGCTAAGACGGGCGGTAATTATGCCGCCAGCCTGTATGTCTCAGAAGAAGTTGAAAAACTGGGTT ATTCTCAAGTACTTTGGTTAGATGCTGTACACGGCAAGTATATTGAAGAAGTGGGTGCAATGAATATCTGTTTTGTTTAT GAAAATAAGCACATTGTAACACCAGCCTTAAGTGGCAGTATATTACCCGGTATTACTCGTGATTCTATTCTTAAACTGGC GCCGGCATTGGGATTTGAAGTCAGCGAAGAACGCTTAGATATTGAGCAGATATTAGCCGATATAAAAAGTGGTAAAATAA CGGAAGCATTTGGCTGTGGTACTGCCGCTGTTATCTCTCCGGTTGGTAAACTATGCTGGAAAGGCACTGATTATATTATC AATAACAATAAATCGGGCGAGATTTCCAAGCAGTTATATGATGAGCTGACCGGTATTCAATACGGGACACGCAAAGACCG TTTTGGCTGGATAGAGAAGGTTGATCCAGCGGTTACGGTAGACGTTTAA
Upstream 100 bases:
>100_bases ATTTAATCGTGCTTAACGATAACTTATTATATGTCATAGTTGCTGCTCTTTATGCTCTAGATATTGCATTAAGAAAATAA TAAAAATACAGGGAATTGAT
Downstream 100 bases:
>100_bases TTATTCATTTTTACTGTTAAGCACACTAAGAAAAAACCCATTAAGTGATTGATATTTAAATCGCTTAATGGGTTTTTTAA TATCTGCTACTGGCGTTAGC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 1 [H]
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MIIDIKPLELSKRGACPETYSFGADFSDHMFSQNFEQGSGWEKAEITPYHALTLDPSAAVFHYGQEIFEGLKAYRSFDGT INLFRPSENFKRFNRSAKRMAMPEIDGKFHLKALKALISLDHNWIPEQVGSSLYIRPTMIATGKKLGLGASDSYIHFIIT GPAGSYFKGGFEPVSVYIADKYRRAVVGGVGEAKTGGNYAASLYVSEEVEKLGYSQVLWLDAVHGKYIEEVGAMNICFVY ENKHIVTPALSGSILPGITRDSILKLAPALGFEVSEERLDIEQILADIKSGKITEAFGCGTAAVISPVGKLCWKGTDYII NNNKSGEISKQLYDELTGIQYGTRKDRFGWIEKVDPAVTVDV
Sequences:
>Translated_362_residues MIIDIKPLELSKRGACPETYSFGADFSDHMFSQNFEQGSGWEKAEITPYHALTLDPSAAVFHYGQEIFEGLKAYRSFDGT INLFRPSENFKRFNRSAKRMAMPEIDGKFHLKALKALISLDHNWIPEQVGSSLYIRPTMIATGKKLGLGASDSYIHFIIT GPAGSYFKGGFEPVSVYIADKYRRAVVGGVGEAKTGGNYAASLYVSEEVEKLGYSQVLWLDAVHGKYIEEVGAMNICFVY ENKHIVTPALSGSILPGITRDSILKLAPALGFEVSEERLDIEQILADIKSGKITEAFGCGTAAVISPVGKLCWKGTDYII NNNKSGEISKQLYDELTGIQYGTRKDRFGWIEKVDPAVTVDV >Mature_362_residues MIIDIKPLELSKRGACPETYSFGADFSDHMFSQNFEQGSGWEKAEITPYHALTLDPSAAVFHYGQEIFEGLKAYRSFDGT INLFRPSENFKRFNRSAKRMAMPEIDGKFHLKALKALISLDHNWIPEQVGSSLYIRPTMIATGKKLGLGASDSYIHFIIT GPAGSYFKGGFEPVSVYIADKYRRAVVGGVGEAKTGGNYAASLYVSEEVEKLGYSQVLWLDAVHGKYIEEVGAMNICFVY ENKHIVTPALSGSILPGITRDSILKLAPALGFEVSEERLDIEQILADIKSGKITEAFGCGTAAVISPVGKLCWKGTDYII NNNKSGEISKQLYDELTGIQYGTRKDRFGWIEKVDPAVTVDV
Specific function: Transaminates branched-chain amino acids and ketoglutarate. Involved in the final step of the methionine regeneration pathway, where ketomethiobutyrate (KMTB) is converted to methionine via a transamination. The amino donor preference is isoleucine, leuci
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=345, Percent_Identity=39.1304347826087, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI296010906, Length=345, Percent_Identity=39.1304347826087, Blast_Score=248, Evalue=5e-66, Organism=Homo sapiens, GI38176287, Length=345, Percent_Identity=39.1304347826087, Blast_Score=248, Evalue=5e-66, Organism=Homo sapiens, GI50658084, Length=335, Percent_Identity=38.8059701492537, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI258614015, Length=287, Percent_Identity=39.3728222996516, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI296010902, Length=345, Percent_Identity=33.9130434782609, Blast_Score=194, Evalue=9e-50, Organism=Homo sapiens, GI296010900, Length=351, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=1e-49, Organism=Escherichia coli, GI48994963, Length=321, Percent_Identity=31.1526479750779, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17568601, Length=361, Percent_Identity=37.3961218836565, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17565728, Length=348, Percent_Identity=36.4942528735632, Blast_Score=183, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322002, Length=349, Percent_Identity=40.974212034384, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6322608, Length=334, Percent_Identity=41.0179640718563, Blast_Score=256, Evalue=6e-69, Organism=Drosophila melanogaster, GI24641779, Length=344, Percent_Identity=41.2790697674419, Blast_Score=261, Evalue=6e-70,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39927; Mature: 39927
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDIKPLELSKRGACPETYSFGADFSDHMFSQNFEQGSGWEKAEITPYHALTLDPSAAV CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHH FHYGQEIFEGLKAYRSFDGTINLFRPSENFKRFNRSAKRMAMPEIDGKFHLKALKALISL HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC DHNWIPEQVGSSLYIRPTMIATGKKLGLGASDSYIHFIITGPAGSYFKGGFEPVSVYIAD CCCCCHHHHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEH KYRRAVVGGVGEAKTGGNYAASLYVSEEVEKLGYSQVLWLDAVHGKYIEEVGAMNICFVY HHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCEEEEEEHHHHHHHHHHCCEEEEEEE ENKHIVTPALSGSILPGITRDSILKLAPALGFEVSEERLDIEQILADIKSGKITEAFGCG CCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCEEEHHCCC TAAVISPVGKLCWKGTDYIINNNKSGEISKQLYDELTGIQYGTRKDRFGWIEKVDPAVTV HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEE DV CC >Mature Secondary Structure MIIDIKPLELSKRGACPETYSFGADFSDHMFSQNFEQGSGWEKAEITPYHALTLDPSAAV CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHH FHYGQEIFEGLKAYRSFDGTINLFRPSENFKRFNRSAKRMAMPEIDGKFHLKALKALISL HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC DHNWIPEQVGSSLYIRPTMIATGKKLGLGASDSYIHFIITGPAGSYFKGGFEPVSVYIAD CCCCCHHHHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEH KYRRAVVGGVGEAKTGGNYAASLYVSEEVEKLGYSQVLWLDAVHGKYIEEVGAMNICFVY HHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCEEEEEEHHHHHHHHHHCCEEEEEEE ENKHIVTPALSGSILPGITRDSILKLAPALGFEVSEERLDIEQILADIKSGKITEAFGCG CCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCEEEHHCCC TAAVISPVGKLCWKGTDYIINNNKSGEISKQLYDELTGIQYGTRKDRFGWIEKVDPAVTV HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEE DV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]