| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946232
Identifier: 119946232
GI number: 119946232
Start: 3181637
End: 3182797
Strand: Reverse
Name: 119946232
Synonym: Ping_2593
Alternate gene names: NA
Gene position: 3182797-3181637 (Counterclockwise)
Preceding gene: 119946235
Following gene: 119946231
Centisome position: 69.8
GC content: 38.5
Gene sequence:
>1161_bases GTGATAAAAAAAATACCAACTAAATCATCAGGGCAAGATTTAGTTGCTAAAAACATTATTCTAATGTTACAGGAATATAT AGGTTGGCTGGGTTTCAAGCCCGCTATCCATTTTGAGTTAGAGGGCTGTATAACAAGACCTCAACCCAGTTTCACTATTG ACTACCAGAGAATCAACGCACGCCTTAAAGCCAATAATATTGAGGGGGAATTAGTTTCTGAATTTTGGCAGAATCAGTGG GAATACGTGTCTAATTTTTCCCAACAATCACCTTTGAAAGAAGCGCAAAATTTAAGCGCTGTGATGAAATATTTGCCTTG CTGGTTTCGCGAACAGGGGATTAAGCAAACTTATATAAAACCGGTCGTGTGGGCGGGTGATCAGGGTAGATTCGCCACAG GGAGTGGAACAATATTCAGTGCACAATCGGGAGCTGTCCATATTCCTAATGCAATACAGATAAATATCAGCGCATTGAAT ACACAGGGTGACAATATAATAACGGATGCGGGTTTTGGCGAATATCTGCAGCAGTGTTTTTTAGAAACCAGCTTAAACTG CGCGCTATTATATTTACCGGAACCTGAAGCCTATCAGAGATTATTATTAAAAACAGATTTTGGGTTAGCACAGGAATTGT GCTCCCCCACTGACATTTCCGGGGGACATCAAGGCAGTATCGCGCTGTATAAAAAGTTCGGTAAACATAATCAGGATATG GGGGTAACGCCTCTGATATACAGTGCAAATAATGAAGTCTTAGTGACACAGCAAAATTGGCAAGAGAGCGCCAGAATTGA GCATAGATTGGGTGCCTCAAGTCTTTTTTATAATCCCTTTTACAATGTAATTTTTGCATTATTGAACTTAATTGATGCTT TGCACGTATACAAGCGCGGATCATGTATTAAGTTATTAAAACCTGAAATAAGCAAAAAACAACTACCACAGTCCATTTTT CCCTCCAATAATGAGCAGGGATCACTGTGTTTATTTCGTCAAGAGACTTGGTTTGCCGATTCAATTGATAACATTTACAA ATTTTCAACTTTTAACAACATTAATCTTCCCGATATGTTGCATGATGGTTCTGGTAAGGCATTAAAAGCCGAAATTATTA AAAACTATCAGCAGGATATATTTTCTGGTAATTCATTGTAG
Upstream 100 bases:
>100_bases AATTATCACAGTCTATTTTGACTTTTTATCCGATACCATAAATAATCGCTATTATATTTATGAACAAATTTAATCCAACC CGGCTATAGGTATTATTAAC
Downstream 100 bases:
>100_bases ATATTAAGCGACTGACAGATGACTATAAAACAATTAAAAACACCCTTACTGACTGGCACATCAGTTGCGCAGAAACGAGC TGAATTAAAGCAGTATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MIKKIPTKSSGQDLVAKNIILMLQEYIGWLGFKPAIHFELEGCITRPQPSFTIDYQRINARLKANNIEGELVSEFWQNQW EYVSNFSQQSPLKEAQNLSAVMKYLPCWFREQGIKQTYIKPVVWAGDQGRFATGSGTIFSAQSGAVHIPNAIQINISALN TQGDNIITDAGFGEYLQQCFLETSLNCALLYLPEPEAYQRLLLKTDFGLAQELCSPTDISGGHQGSIALYKKFGKHNQDM GVTPLIYSANNEVLVTQQNWQESARIEHRLGASSLFYNPFYNVIFALLNLIDALHVYKRGSCIKLLKPEISKKQLPQSIF PSNNEQGSLCLFRQETWFADSIDNIYKFSTFNNINLPDMLHDGSGKALKAEIIKNYQQDIFSGNSL
Sequences:
>Translated_386_residues MIKKIPTKSSGQDLVAKNIILMLQEYIGWLGFKPAIHFELEGCITRPQPSFTIDYQRINARLKANNIEGELVSEFWQNQW EYVSNFSQQSPLKEAQNLSAVMKYLPCWFREQGIKQTYIKPVVWAGDQGRFATGSGTIFSAQSGAVHIPNAIQINISALN TQGDNIITDAGFGEYLQQCFLETSLNCALLYLPEPEAYQRLLLKTDFGLAQELCSPTDISGGHQGSIALYKKFGKHNQDM GVTPLIYSANNEVLVTQQNWQESARIEHRLGASSLFYNPFYNVIFALLNLIDALHVYKRGSCIKLLKPEISKKQLPQSIF PSNNEQGSLCLFRQETWFADSIDNIYKFSTFNNINLPDMLHDGSGKALKAEIIKNYQQDIFSGNSL >Mature_386_residues MIKKIPTKSSGQDLVAKNIILMLQEYIGWLGFKPAIHFELEGCITRPQPSFTIDYQRINARLKANNIEGELVSEFWQNQW EYVSNFSQQSPLKEAQNLSAVMKYLPCWFREQGIKQTYIKPVVWAGDQGRFATGSGTIFSAQSGAVHIPNAIQINISALN TQGDNIITDAGFGEYLQQCFLETSLNCALLYLPEPEAYQRLLLKTDFGLAQELCSPTDISGGHQGSIALYKKFGKHNQDM GVTPLIYSANNEVLVTQQNWQESARIEHRLGASSLFYNPFYNVIFALLNLIDALHVYKRGSCIKLLKPEISKKQLPQSIF PSNNEQGSLCLFRQETWFADSIDNIYKFSTFNNINLPDMLHDGSGKALKAEIIKNYQQDIFSGNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43559; Mature: 43559
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIPTKSSGQDLVAKNIILMLQEYIGWLGFKPAIHFELEGCITRPQPSFTIDYQRINA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEHHHHCE RLKANNIEGELVSEFWQNQWEYVSNFSQQSPLKEAQNLSAVMKYLPCWFREQGIKQTYIK EEEECCCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC PVVWAGDQGRFATGSGTIFSAQSGAVHIPNAIQINISALNTQGDNIITDAGFGEYLQQCF CEEEECCCCCEECCCCEEEECCCCCEECCCEEEEEEEEEECCCCCEEECCCHHHHHHHHH LETSLNCALLYLPEPEAYQRLLLKTDFGLAQELCSPTDISGGHQGSIALYKKFGKHNQDM HHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC GVTPLIYSANNEVLVTQQNWQESARIEHRLGASSLFYNPFYNVIFALLNLIDALHVYKRG CCCEEEEECCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SCIKLLKPEISKKQLPQSIFPSNNEQGSLCLFRQETWFADSIDNIYKFSTFNNINLPDML CEEEECCCCCHHHHCCHHHCCCCCCCCCEEEEECCCCCHHCHHHHEEEECCCCCCCCHHE HDGSGKALKAEIIKNYQQDIFSGNSL ECCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIKKIPTKSSGQDLVAKNIILMLQEYIGWLGFKPAIHFELEGCITRPQPSFTIDYQRINA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEHHHHCE RLKANNIEGELVSEFWQNQWEYVSNFSQQSPLKEAQNLSAVMKYLPCWFREQGIKQTYIK EEEECCCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC PVVWAGDQGRFATGSGTIFSAQSGAVHIPNAIQINISALNTQGDNIITDAGFGEYLQQCF CEEEECCCCCEECCCCEEEECCCCCEECCCEEEEEEEEEECCCCCEEECCCHHHHHHHHH LETSLNCALLYLPEPEAYQRLLLKTDFGLAQELCSPTDISGGHQGSIALYKKFGKHNQDM HHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC GVTPLIYSANNEVLVTQQNWQESARIEHRLGASSLFYNPFYNVIFALLNLIDALHVYKRG CCCEEEEECCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SCIKLLKPEISKKQLPQSIFPSNNEQGSLCLFRQETWFADSIDNIYKFSTFNNINLPDML CEEEECCCCCHHHHCCHHHCCCCCCCCCEEEEECCCCCHHCHHHHEEEECCCCCCCCHHE HDGSGKALKAEIIKNYQQDIFSGNSL ECCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA