| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946216
Identifier: 119946216
GI number: 119946216
Start: 3158804
End: 3159244
Strand: Reverse
Name: 119946216
Synonym: Ping_2576
Alternate gene names: NA
Gene position: 3159244-3158804 (Counterclockwise)
Preceding gene: 119946217
Following gene: 119946215
Centisome position: 69.29
GC content: 34.24
Gene sequence:
>441_bases ATGAGCTATGTAAATAATAATTTAATGAGTAATGAAGATGTAATATATGAAGCTAAGATACATTGGTTTATTTTCGTACC AAGTGCAGTGCTCTTTCTGTTAGGGATTATTTATTCTACTGACGGTGCTGGAGGAATATTGTTCTTAATTGCAATTATCT TATTTGTTAGGGCTATTATTGCTAAAGCTACTACTGAACTTGCTATCACCTCAAAAAGAGTAATAGCTAAAACCGGCTTA ATAAGCCGAAGTACAATAGAACTAAATCATAGTAAAGTTGAAAGCTTTAATATTGACCAAAGTATATTTGGCCGTTTGTT TGGCTACGGTACTCTCGTTATAAATGGTACTGGTGGCGGTAAAACCCCTATTTCAAATATAGATGCACCGTTAGAATTCA GGAAGAATGCAATGTCTACTATCGATGCAACTCAATCGTAG
Upstream 100 bases:
>100_bases CGGATTTCCACCGTAAATATGGAATTTTTTGGTTTAATTCGCTGTTAGGCCAAAATTTAAACTTTGCTGTTTTAGCCAAG TTAACTACCAAGGATAAGTA
Downstream 100 bases:
>100_bases TATTGGCCTAACAAATCGTTTAAACGGACGTGTAACAGTTGGCTCGCGCTCGTTCCTCGCACAGTTTAGCCAGCTATTTC ACACCTCTTAACGCGGCGTT
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: Membrane-Flanked Domain
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSYVNNNLMSNEDVIYEAKIHWFIFVPSAVLFLLGIIYSTDGAGGILFLIAIILFVRAIIAKATTELAITSKRVIAKTGL ISRSTIELNHSKVESFNIDQSIFGRLFGYGTLVINGTGGGKTPISNIDAPLEFRKNAMSTIDATQS
Sequences:
>Translated_146_residues MSYVNNNLMSNEDVIYEAKIHWFIFVPSAVLFLLGIIYSTDGAGGILFLIAIILFVRAIIAKATTELAITSKRVIAKTGL ISRSTIELNHSKVESFNIDQSIFGRLFGYGTLVINGTGGGKTPISNIDAPLEFRKNAMSTIDATQS >Mature_145_residues SYVNNNLMSNEDVIYEAKIHWFIFVPSAVLFLLGIIYSTDGAGGILFLIAIILFVRAIIAKATTELAITSKRVIAKTGLI SRSTIELNHSKVESFNIDQSIFGRLFGYGTLVINGTGGGKTPISNIDAPLEFRKNAMSTIDATQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15875; Mature: 15743
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVNNNLMSNEDVIYEAKIHWFIFVPSAVLFLLGIIYSTDGAGGILFLIAIILFVRAII CCCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AKATTELAITSKRVIAKTGLISRSTIELNHSKVESFNIDQSIFGRLFGYGTLVINGTGGG HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHCEEEEEEECCCCC KTPISNIDAPLEFRKNAMSTIDATQS CCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SYVNNNLMSNEDVIYEAKIHWFIFVPSAVLFLLGIIYSTDGAGGILFLIAIILFVRAII CCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AKATTELAITSKRVIAKTGLISRSTIELNHSKVESFNIDQSIFGRLFGYGTLVINGTGGG HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHCEEEEEEECCCCC KTPISNIDAPLEFRKNAMSTIDATQS CCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA