| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is terD [H]
Identifier: 119946215
GI number: 119946215
Start: 3157953
End: 3158528
Strand: Reverse
Name: terD [H]
Synonym: Ping_2575
Alternate gene names: 119946215
Gene position: 3158528-3157953 (Counterclockwise)
Preceding gene: 119946216
Following gene: 119946214
Centisome position: 69.27
GC content: 38.72
Gene sequence:
>576_bases ATGGCAGTTTCTCTACAAAAAGGTGGAAATGTTTCACTGGATAAAGTTGCGCCAGGTATGACTAAATGTTTGCTTGGTTT AGGTTGGGATGCAAGAAGTACTGACGGAATTGATTTTGACTTAGATGCATCAGGCTTTATGGTTAATACAGAAGGTAAAG TACTTTCAGACAAAGGTTTTATTTTTTACGGTAACGTACTTTCTGAATGTGGTTCTGTTGAGCATACGGGGGATAACTTA ACTGGCGAGGGTGATGGCGATGACGAAGTGATTAAAGTTGATTTAAGCAAAGTCCCTGCTGATGTTGAAAAAATTGTTGT TGGTGTGACTATTCACGAAGCTGAATCACGTAAGCAAAATTTTGGCCAAGTTTCTAATGCTTTCATCCGCGTTGTAAATG ATGCAAACAAAGAAGAAGTTGCCCGTTACGATTTATCCGAAGACTATTCTATTGAAACTGCACTACTTTTTGGTGAATTG TATCGCCATAATGGTACGTGGAAGTTTAAAGCAATTGGTCAAGGTTTTGCGGGTGGCTTAAAAGCGATGGCGCAACAATT TAACGTTAATGTTTAA
Upstream 100 bases:
>100_bases AATTGGCTTAGTGCATATTGATTTTTATATTTGGAGTTTTAAGCTCTGTTTCATATTAAACTCAATGTTTATTTTCAATA ACTAAAAAGGTGGTATAAGA
Downstream 100 bases:
>100_bases TTTTAAATAAAGTTAGTCGAACCATATTTATCCGGGGGAACATCTGTTCCCTCTTTTTTTTGCATATTTAGATTAATGGT ATCGATATGGCAATTTCGTT
Product: stress protein, tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAVSLQKGGNVSLDKVAPGMTKCLLGLGWDARSTDGIDFDLDASGFMVNTEGKVLSDKGFIFYGNVLSECGSVEHTGDNL TGEGDGDDEVIKVDLSKVPADVEKIVVGVTIHEAESRKQNFGQVSNAFIRVVNDANKEEVARYDLSEDYSIETALLFGEL YRHNGTWKFKAIGQGFAGGLKAMAQQFNVNV
Sequences:
>Translated_191_residues MAVSLQKGGNVSLDKVAPGMTKCLLGLGWDARSTDGIDFDLDASGFMVNTEGKVLSDKGFIFYGNVLSECGSVEHTGDNL TGEGDGDDEVIKVDLSKVPADVEKIVVGVTIHEAESRKQNFGQVSNAFIRVVNDANKEEVARYDLSEDYSIETALLFGEL YRHNGTWKFKAIGQGFAGGLKAMAQQFNVNV >Mature_190_residues AVSLQKGGNVSLDKVAPGMTKCLLGLGWDARSTDGIDFDLDASGFMVNTEGKVLSDKGFIFYGNVLSECGSVEHTGDNLT GEGDGDDEVIKVDLSKVPADVEKIVVGVTIHEAESRKQNFGQVSNAFIRVVNDANKEEVARYDLSEDYSIETALLFGELY RHNGTWKFKAIGQGFAGGLKAMAQQFNVNV
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20589; Mature: 20458
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSLQKGGNVSLDKVAPGMTKCLLGLGWDARSTDGIDFDLDASGFMVNTEGKVLSDKGF CEEECCCCCCEEHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCEEECCCE IFYGNVLSECGSVEHTGDNLTGEGDGDDEVIKVDLSKVPADVEKIVVGVTIHEAESRKQN EEECHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCHHEEEEEEEECCHHHHHH FGQVSNAFIRVVNDANKEEVARYDLSEDYSIETALLFGELYRHNGTWKFKAIGQGFAGGL HHHHHHHHEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHH KAMAQQFNVNV HHHHHHHCCCC >Mature Secondary Structure AVSLQKGGNVSLDKVAPGMTKCLLGLGWDARSTDGIDFDLDASGFMVNTEGKVLSDKGF EEECCCCCCEEHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCEEECCCE IFYGNVLSECGSVEHTGDNLTGEGDGDDEVIKVDLSKVPADVEKIVVGVTIHEAESRKQN EEECHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCHHEEEEEEEECCHHHHHH FGQVSNAFIRVVNDANKEEVARYDLSEDYSIETALLFGELYRHNGTWKFKAIGQGFAGGL HHHHHHHHEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHH KAMAQQFNVNV HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]