| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is hemH2 [H]
Identifier: 119946175
GI number: 119946175
Start: 3097281
End: 3098303
Strand: Direct
Name: hemH2 [H]
Synonym: Ping_2535
Alternate gene names: 119946175
Gene position: 3097281-3098303 (Clockwise)
Preceding gene: 119946174
Following gene: 119946176
Centisome position: 67.93
GC content: 43.01
Gene sequence:
>1023_bases GTGTCACGATTTTCAGGTATTACCGACAACCCTCATGAAGGGCGTTTTCATCAAAAAACCGGCATTTTACTTACCAACCT TGGTAGCCCGGACGCCGCCACTGCCAAAGCATTACGCATCTATCTAAGAGAGTTTTTATCTGATCGACGTATAGTTGAAA TCCCGCGTTTACTCTGGATGATGATTTTACACGGCATTATACTTAGAACACGGCCTAAACGTTCTGCGAAACTCTATGAA AGTGTTTGGACCAAAGATGGTTCACCCTTAACCCATATGACGCGTGTTCAGAGCGATAAACTGAGTGCCTTTTTAAAAGA GAAAGGCTATGAAAATACCGAAGTGGTGATGGCCATGCGCTACGGTAATCCCTCCATTGAAGCGGGCCTGGAAGAATTAC GTGAGAAGGGCTTTACTCGGATTGTGGTGTTTCCTTTGTACCCGCAATATTCAAGTCCCACGATAGGTTCAACCTTTGAT GCTGTTGCTAAGGTTTTATGTAAATGGCGCTGGGTACCTGAGCTGCACTTTATTAATGGATACCACAAAAATGAATCCTA CATCAATTCGTTAGCCAACAGTGTCAGTGAAGACTTAGAGGCCAACGGCATGCCGCAAAAATTAGTCTTCTCCTATCATG GTATGCCTAAACTGTTTTTAAAAAATGGCGATCCTTATCACTGCTTGTGTCTGCAAACGACACGTCTGGTGGTTGAAAAA CTTGGCTTAGATAAGGAGCGCGTTGTCAGCACTTTCCAAAGTCGTTTTGGTAAAGCAGAATGGTTAAAGCCCTATACCGA TGAAACCTTAAAAAGTTATCCGGGACGAGGTATTAAAGATATCGCGATTATCAGCCCTGCTTTTAGCGCCGATTGCTTAG AAACTCTGGAAGAGATTGAAGTTGAAAATCGCGAGATATTTAAGCACGCTGGCGGTGAAAAATACCGCTATATTCCCGCA TTAAATGATCGGGATGATCATATTGAAGCCTTGTTTGATGTGTTAAAACCGAATTTAGGTTAG
Upstream 100 bases:
>100_bases ATGAGTGTCTTACAAATTCACTCAAAAAGTATTCTCAAATCACTGTCAATTCGTTACAGTGGCGTTTATTTCAATTCTAT ATGCTCAAAAGGAGCTTTGC
Downstream 100 bases:
>100_bases GAAGAGCAGCTATCAGCTATCAGCTATCAGCTATCGGCTGATGGCTGACAGCTGACGGCTGACCGCTCGCGGCTCGAGTC TGCATTAGCCGGAATAGGTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase 2; Protoheme ferro-lyase 2 [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSRFSGITDNPHEGRFHQKTGILLTNLGSPDAATAKALRIYLREFLSDRRIVEIPRLLWMMILHGIILRTRPKRSAKLYE SVWTKDGSPLTHMTRVQSDKLSAFLKEKGYENTEVVMAMRYGNPSIEAGLEELREKGFTRIVVFPLYPQYSSPTIGSTFD AVAKVLCKWRWVPELHFINGYHKNESYINSLANSVSEDLEANGMPQKLVFSYHGMPKLFLKNGDPYHCLCLQTTRLVVEK LGLDKERVVSTFQSRFGKAEWLKPYTDETLKSYPGRGIKDIAIISPAFSADCLETLEEIEVENREIFKHAGGEKYRYIPA LNDRDDHIEALFDVLKPNLG
Sequences:
>Translated_340_residues MSRFSGITDNPHEGRFHQKTGILLTNLGSPDAATAKALRIYLREFLSDRRIVEIPRLLWMMILHGIILRTRPKRSAKLYE SVWTKDGSPLTHMTRVQSDKLSAFLKEKGYENTEVVMAMRYGNPSIEAGLEELREKGFTRIVVFPLYPQYSSPTIGSTFD AVAKVLCKWRWVPELHFINGYHKNESYINSLANSVSEDLEANGMPQKLVFSYHGMPKLFLKNGDPYHCLCLQTTRLVVEK LGLDKERVVSTFQSRFGKAEWLKPYTDETLKSYPGRGIKDIAIISPAFSADCLETLEEIEVENREIFKHAGGEKYRYIPA LNDRDDHIEALFDVLKPNLG >Mature_339_residues SRFSGITDNPHEGRFHQKTGILLTNLGSPDAATAKALRIYLREFLSDRRIVEIPRLLWMMILHGIILRTRPKRSAKLYES VWTKDGSPLTHMTRVQSDKLSAFLKEKGYENTEVVMAMRYGNPSIEAGLEELREKGFTRIVVFPLYPQYSSPTIGSTFDA VAKVLCKWRWVPELHFINGYHKNESYINSLANSVSEDLEANGMPQKLVFSYHGMPKLFLKNGDPYHCLCLQTTRLVVEKL GLDKERVVSTFQSRFGKAEWLKPYTDETLKSYPGRGIKDIAIISPAFSADCLETLEEIEVENREIFKHAGGEKYRYIPAL NDRDDHIEALFDVLKPNLG
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=327, Percent_Identity=28.1345565749235, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI60499025, Length=327, Percent_Identity=28.1345565749235, Blast_Score=109, Evalue=4e-24, Organism=Escherichia coli, GI1786681, Length=319, Percent_Identity=48.2758620689655, Blast_Score=303, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6324750, Length=354, Percent_Identity=23.728813559322, Blast_Score=92, Evalue=9e-20, Organism=Drosophila melanogaster, GI17864156, Length=334, Percent_Identity=26.6467065868263, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24651774, Length=265, Percent_Identity=25.2830188679245, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI45552018, Length=133, Percent_Identity=30.0751879699248, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 38891; Mature: 38760
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFSGITDNPHEGRFHQKTGILLTNLGSPDAATAKALRIYLREFLSDRRIVEIPRLLWM CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MILHGIILRTRPKRSAKLYESVWTKDGSPLTHMTRVQSDKLSAFLKEKGYENTEVVMAMR HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE YGNPSIEAGLEELREKGFTRIVVFPLYPQYSSPTIGSTFDAVAKVLCKWRWVPELHFING CCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC YHKNESYINSLANSVSEDLEANGMPQKLVFSYHGMPKLFLKNGDPYHCLCLQTTRLVVEK CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHHH LGLDKERVVSTFQSRFGKAEWLKPYTDETLKSYPGRGIKDIAIISPAFSADCLETLEEIE HCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHC VENREIFKHAGGEKYRYIPALNDRDDHIEALFDVLKPNLG CHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SRFSGITDNPHEGRFHQKTGILLTNLGSPDAATAKALRIYLREFLSDRRIVEIPRLLWM CCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MILHGIILRTRPKRSAKLYESVWTKDGSPLTHMTRVQSDKLSAFLKEKGYENTEVVMAMR HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE YGNPSIEAGLEELREKGFTRIVVFPLYPQYSSPTIGSTFDAVAKVLCKWRWVPELHFING CCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC YHKNESYINSLANSVSEDLEANGMPQKLVFSYHGMPKLFLKNGDPYHCLCLQTTRLVVEK CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHHH LGLDKERVVSTFQSRFGKAEWLKPYTDETLKSYPGRGIKDIAIISPAFSADCLETLEEIE HCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHC VENREIFKHAGGEKYRYIPALNDRDDHIEALFDVLKPNLG CHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]